Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 AP006587.1-201ENST00000534129 1502 ntBASIC17.19■□□□□ 0.34
CDH11P55287 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.19■□□□□ 0.34
CDH11P55287 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDH11P55287 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CDH11P55287 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH11P55287 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH11P55287 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH11P55287 ANO7L1-203ENST00000602586 1720 ntBASIC17.18■□□□□ 0.34
CDH11P55287 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH11P55287 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH11P55287 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH11P55287 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CDH11P55287 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH11P55287 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH11P55287 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH11P55287 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH11P55287 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH11P55287 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH11P55287 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH11P55287 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH11P55287 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH11P55287 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH11P55287 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH11P55287 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.18■□□□□ 0.34
CDH11P55287 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDH11P55287 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH11P55287 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH11P55287 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH11P55287 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH11P55287 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDH11P55287 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH11P55287 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH11P55287 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDH11P55287 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH11P55287 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH11P55287 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDH11P55287 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
CDH11P55287 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDH11P55287 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDH11P55287 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDH11P55287 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH11P55287 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDH11P55287 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH11P55287 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH11P55287 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH11P55287 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH11P55287 RARRES2P10-201ENST00000564312 460 ntBASIC17.17■□□□□ 0.34
CDH11P55287 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.17■□□□□ 0.34
CDH11P55287 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH11P55287 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.17■□□□□ 0.34
CDH11P55287 AL049637.2-201ENST00000641778 930 ntBASIC17.17■□□□□ 0.34
CDH11P55287 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDH11P55287 NOC2LP1-202ENST00000452600 2235 ntBASIC17.17■□□□□ 0.34
CDH11P55287 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH11P55287 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH11P55287 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 NBPF21P-201ENST00000425093 1451 ntBASIC17.17■□□□□ 0.34
CDH11P55287 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH11P55287 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CDH11P55287 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH11P55287 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDH11P55287 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDH11P55287 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CDH11P55287 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDH11P55287 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms