Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRP9P49458 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRP9P49458 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SRP9P49458 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRP9P49458 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRP9P49458 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.64■□□□□ 0.25
SRP9P49458 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.63■□□□□ 0.25
SRP9P49458 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRP9P49458 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.63■□□□□ 0.25
SRP9P49458 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
SRP9P49458 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRP9P49458 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.63■□□□□ 0.25
SRP9P49458 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.63■□□□□ 0.25
SRP9P49458 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRP9P49458 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRP9P49458 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
SRP9P49458 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRP9P49458 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.63■□□□□ 0.25
SRP9P49458 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRP9P49458 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
SRP9P49458 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SRP9P49458 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.63■□□□□ 0.25
SRP9P49458 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.63■□□□□ 0.25
SRP9P49458 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.63■□□□□ 0.25
SRP9P49458 KRT16P5-201ENST00000455284 522 ntBASIC16.63■□□□□ 0.25
SRP9P49458 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.63■□□□□ 0.25
SRP9P49458 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SRP9P49458 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.63■□□□□ 0.25
SRP9P49458 AL512353.2-201ENST00000448759 1962 ntBASIC16.63■□□□□ 0.25
SRP9P49458 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SRP9P49458 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRP9P49458 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.63■□□□□ 0.25
SRP9P49458 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRP9P49458 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRP9P49458 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRP9P49458 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.63■□□□□ 0.25
SRP9P49458 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRP9P49458 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRP9P49458 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRP9P49458 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SRP9P49458 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SRP9P49458 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SRP9P49458 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.62■□□□□ 0.25
SRP9P49458 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SRP9P49458 GCSHP5-201ENST00000443090 522 ntBASIC16.62■□□□□ 0.25
SRP9P49458 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.62■□□□□ 0.25
SRP9P49458 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.62■□□□□ 0.25
SRP9P49458 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.62■□□□□ 0.25
SRP9P49458 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.62■□□□□ 0.25
SRP9P49458 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.62■□□□□ 0.25
SRP9P49458 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.62■□□□□ 0.25
SRP9P49458 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.62■□□□□ 0.25
SRP9P49458 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SRP9P49458 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SRP9P49458 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SRP9P49458 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.62■□□□□ 0.25
SRP9P49458 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.62■□□□□ 0.25
SRP9P49458 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.62■□□□□ 0.25
SRP9P49458 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.62■□□□□ 0.25
SRP9P49458 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRP9P49458 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SRP9P49458 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
SRP9P49458 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
SRP9P49458 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SRP9P49458 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms