Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TCF4P15884 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.57■□□□□ 0.72
TCF4P15884 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.57■□□□□ 0.72
TCF4P15884 AC008556.1-201ENST00000610908 2040 ntBASIC19.57■□□□□ 0.72
TCF4P15884 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TCF4P15884 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.57■□□□□ 0.72
TCF4P15884 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCF4P15884 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.57■□□□□ 0.72
TCF4P15884 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.56■□□□□ 0.72
TCF4P15884 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
TCF4P15884 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.56■□□□□ 0.72
TCF4P15884 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
TCF4P15884 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.56■□□□□ 0.72
TCF4P15884 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.56■□□□□ 0.72
TCF4P15884 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TCF4P15884 AL355355.2-201ENST00000442321 338 ntBASIC19.56■□□□□ 0.72
TCF4P15884 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.56■□□□□ 0.72
TCF4P15884 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.56■□□□□ 0.72
TCF4P15884 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.56■□□□□ 0.72
TCF4P15884 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.56■□□□□ 0.72
TCF4P15884 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.56■□□□□ 0.72
TCF4P15884 DGCR10-201ENST00000609839 495 ntBASIC19.56■□□□□ 0.72
TCF4P15884 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.56■□□□□ 0.72
TCF4P15884 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TCF4P15884 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 AC135050.7-201ENST00000624508 2218 ntBASIC19.56■□□□□ 0.72
TCF4P15884 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TCF4P15884 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.56■□□□□ 0.72
TCF4P15884 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.56■□□□□ 0.72
TCF4P15884 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCF4P15884 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.56■□□□□ 0.72
TCF4P15884 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
TCF4P15884 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TCF4P15884 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.55■□□□□ 0.72
TCF4P15884 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.55■□□□□ 0.72
TCF4P15884 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
TCF4P15884 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.55■□□□□ 0.72
TCF4P15884 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.55■□□□□ 0.72
TCF4P15884 AP001412.1-201ENST00000608405 714 ntBASIC19.55■□□□□ 0.72
TCF4P15884 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
TCF4P15884 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 GPAT2P1-201ENST00000444924 1672 ntBASIC19.55■□□□□ 0.72
TCF4P15884 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TCF4P15884 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCF4P15884 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TCF4P15884 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
TCF4P15884 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.54■□□□□ 0.72
TCF4P15884 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
TCF4P15884 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.54■□□□□ 0.72
TCF4P15884 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TCF4P15884 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms