Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSF1P09603 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.22■□□□□ 0.19
CSF1P09603 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.22■□□□□ 0.19
CSF1P09603 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CSF1P09603 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSF1P09603 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSF1P09603 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CSF1P09603 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.22■□□□□ 0.19
CSF1P09603 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.22■□□□□ 0.19
CSF1P09603 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSF1P09603 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSF1P09603 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.21■□□□□ 0.19
CSF1P09603 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 TFP1-202ENST00000475455 1573 ntBASIC16.21■□□□□ 0.19
CSF1P09603 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CSF1P09603 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.21■□□□□ 0.19
CSF1P09603 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CSF1P09603 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CSF1P09603 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CSF1P09603 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CSF1P09603 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CSF1P09603 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.21■□□□□ 0.19
CSF1P09603 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CSF1P09603 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.21■□□□□ 0.19
CSF1P09603 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.21■□□□□ 0.19
CSF1P09603 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.21■□□□□ 0.19
CSF1P09603 RPS2P4-201ENST00000476944 856 ntBASIC16.21■□□□□ 0.19
CSF1P09603 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.21■□□□□ 0.19
CSF1P09603 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.21■□□□□ 0.19
CSF1P09603 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.21■□□□□ 0.19
CSF1P09603 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CSF1P09603 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CSF1P09603 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CSF1P09603 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.21■□□□□ 0.19
CSF1P09603 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSF1P09603 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CSF1P09603 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.21■□□□□ 0.18
CSF1P09603 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CSF1P09603 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CSF1P09603 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CSF1P09603 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
CSF1P09603 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CSF1P09603 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.21■□□□□ 0.18
CSF1P09603 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSF1P09603 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CSF1P09603 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSF1P09603 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSF1P09603 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSF1P09603 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSF1P09603 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSF1P09603 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSF1P09603 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CSF1P09603 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSF1P09603 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CSF1P09603 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.2■□□□□ 0.18
CSF1P09603 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.2■□□□□ 0.18
CSF1P09603 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSF1P09603 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.2■□□□□ 0.18
CSF1P09603 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CSF1P09603 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
CSF1P09603 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CSF1P09603 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CSF1P09603 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSF1P09603 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSF1P09603 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSF1P09603 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.19■□□□□ 0.18
CSF1P09603 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.19■□□□□ 0.18
CSF1P09603 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.19■□□□□ 0.18
CSF1P09603 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.19■□□□□ 0.18
CSF1P09603 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms