Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAF3IP2O43734 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 KRT8P9-201ENST00000558927 1449 ntBASIC16.7■□□□□ 0.26
TRAF3IP2O43734 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.7■□□□□ 0.26
TRAF3IP2O43734 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP2O43734 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 AC008556.1-201ENST00000610908 2040 ntBASIC16.69■□□□□ 0.26
TRAF3IP2O43734 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 MCCD1P1-208ENST00000445732 328 ntBASIC16.69■□□□□ 0.26
TRAF3IP2O43734 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 C2orf69P3-201ENST00000565542 1120 ntBASIC16.69■□□□□ 0.26
TRAF3IP2O43734 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 AC092338.2-201ENST00000568827 1415 ntBASIC16.69■□□□□ 0.26
TRAF3IP2O43734 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP2O43734 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 AL357033.4-201ENST00000617703 1807 ntBASIC16.68■□□□□ 0.26
TRAF3IP2O43734 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 TSPY17P-201ENST00000450329 467 ntBASIC16.68■□□□□ 0.26
TRAF3IP2O43734 AL353719.1-201ENST00000566847 864 ntBASIC16.68■□□□□ 0.26
TRAF3IP2O43734 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms