Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.72■□□□□ 0.43
CLIC1O00299 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC1O00299 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC1O00299 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.71■□□□□ 0.43
CLIC1O00299 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC1O00299 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC1O00299 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC1O00299 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.71■□□□□ 0.43
CLIC1O00299 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC1O00299 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.71■□□□□ 0.43
CLIC1O00299 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC1O00299 KRASP1-201ENST00000407852 552 ntBASIC17.71■□□□□ 0.43
CLIC1O00299 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
CLIC1O00299 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC1O00299 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.71■□□□□ 0.43
CLIC1O00299 AC233263.1-201ENST00000578059 224 ntBASIC17.71■□□□□ 0.43
CLIC1O00299 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLIC1O00299 AL499627.1-201ENST00000569373 2188 ntBASIC17.71■□□□□ 0.43
CLIC1O00299 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC1O00299 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC1O00299 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLIC1O00299 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CLIC1O00299 KRT8P11-201ENST00000409686 1436 ntBASIC17.71■□□□□ 0.43
CLIC1O00299 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLIC1O00299 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CLIC1O00299 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CLIC1O00299 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.71■□□□□ 0.42
CLIC1O00299 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.71■□□□□ 0.42
CLIC1O00299 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
CLIC1O00299 AL162741.1-201ENST00000565563 1558 ntBASIC17.7■□□□□ 0.42
CLIC1O00299 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLIC1O00299 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.7■□□□□ 0.42
CLIC1O00299 AC239809.2-201ENST00000415381 517 ntBASIC17.7■□□□□ 0.42
CLIC1O00299 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.7■□□□□ 0.42
CLIC1O00299 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.7■□□□□ 0.42
CLIC1O00299 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLIC1O00299 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.7■□□□□ 0.42
CLIC1O00299 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.7■□□□□ 0.42
CLIC1O00299 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC1O00299 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CLIC1O00299 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.7■□□□□ 0.42
CLIC1O00299 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.69■□□□□ 0.42
CLIC1O00299 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.69■□□□□ 0.42
CLIC1O00299 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.69■□□□□ 0.42
CLIC1O00299 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.69■□□□□ 0.42
CLIC1O00299 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.69■□□□□ 0.42
CLIC1O00299 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.69■□□□□ 0.42
CLIC1O00299 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.69■□□□□ 0.42
CLIC1O00299 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.69■□□□□ 0.42
CLIC1O00299 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.69■□□□□ 0.42
CLIC1O00299 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLIC1O00299 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLIC1O00299 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.69■□□□□ 0.42
CLIC1O00299 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.69■□□□□ 0.42
CLIC1O00299 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC1O00299 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.69■□□□□ 0.42
CLIC1O00299 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.69■□□□□ 0.42
CLIC1O00299 KRT8P32-201ENST00000512863 1461 ntBASIC17.69■□□□□ 0.42
CLIC1O00299 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC1O00299 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.68■□□□□ 0.42
CLIC1O00299 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC1O00299 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC1O00299 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC1O00299 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC1O00299 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CLIC1O00299 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms