Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AL031258.1-201ENST00000623562 325 ntBASIC23.85■■□□□ 1.41
LRCH1Q9Y2L9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRCH1Q9Y2L9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRCH1Q9Y2L9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRCH1Q9Y2L9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
LRCH1Q9Y2L9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRCH1Q9Y2L9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LRCH1Q9Y2L9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.83■■□□□ 1.41
LRCH1Q9Y2L9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
LRCH1Q9Y2L9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRCH1Q9Y2L9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRCH1Q9Y2L9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRCH1Q9Y2L9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRCH1Q9Y2L9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRCH1Q9Y2L9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
LRCH1Q9Y2L9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRCH1Q9Y2L9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRCH1Q9Y2L9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.8■■□□□ 1.4
LRCH1Q9Y2L9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.8■■□□□ 1.4
LRCH1Q9Y2L9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRCH1Q9Y2L9 AC133561.1-201ENST00000568600 2415 ntBASIC23.8■■□□□ 1.4
LRCH1Q9Y2L9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
LRCH1Q9Y2L9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRCH1Q9Y2L9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
LRCH1Q9Y2L9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LRCH1Q9Y2L9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRCH1Q9Y2L9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRCH1Q9Y2L9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRCH1Q9Y2L9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.79■■□□□ 1.4
LRCH1Q9Y2L9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRCH1Q9Y2L9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRCH1Q9Y2L9 DUSP8P4-201ENST00000399538 1761 ntBASIC23.78■■□□□ 1.4
LRCH1Q9Y2L9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRCH1Q9Y2L9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRCH1Q9Y2L9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.77■■□□□ 1.4
LRCH1Q9Y2L9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRCH1Q9Y2L9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
LRCH1Q9Y2L9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
LRCH1Q9Y2L9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.76■■□□□ 1.39
LRCH1Q9Y2L9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRCH1Q9Y2L9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRCH1Q9Y2L9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.75■■□□□ 1.39
LRCH1Q9Y2L9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRCH1Q9Y2L9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.74■■□□□ 1.39
LRCH1Q9Y2L9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRCH1Q9Y2L9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRCH1Q9Y2L9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.74■■□□□ 1.39
LRCH1Q9Y2L9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
LRCH1Q9Y2L9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRCH1Q9Y2L9 AC012676.1-201ENST00000574705 1949 ntBASIC23.74■■□□□ 1.39
LRCH1Q9Y2L9 AP004833.2-201ENST00000532228 1454 ntBASIC23.74■■□□□ 1.39
LRCH1Q9Y2L9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRCH1Q9Y2L9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
LRCH1Q9Y2L9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRCH1Q9Y2L9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRCH1Q9Y2L9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.72■■□□□ 1.39
LRCH1Q9Y2L9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRCH1Q9Y2L9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
LRCH1Q9Y2L9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRCH1Q9Y2L9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRCH1Q9Y2L9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.71■■□□□ 1.39
LRCH1Q9Y2L9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
LRCH1Q9Y2L9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.71■■□□□ 1.39
LRCH1Q9Y2L9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
LRCH1Q9Y2L9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
LRCH1Q9Y2L9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LRCH1Q9Y2L9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRCH1Q9Y2L9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.7■■□□□ 1.38
LRCH1Q9Y2L9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRCH1Q9Y2L9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRCH1Q9Y2L9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRCH1Q9Y2L9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRCH1Q9Y2L9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.69■■□□□ 1.38
LRCH1Q9Y2L9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LRCH1Q9Y2L9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.69■■□□□ 1.38
LRCH1Q9Y2L9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.69■■□□□ 1.38
LRCH1Q9Y2L9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRCH1Q9Y2L9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.69■■□□□ 1.38
LRCH1Q9Y2L9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRCH1Q9Y2L9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.68■■□□□ 1.38
LRCH1Q9Y2L9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRCH1Q9Y2L9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
LRCH1Q9Y2L9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRCH1Q9Y2L9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.68■■□□□ 1.38
LRCH1Q9Y2L9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.67■■□□□ 1.38
LRCH1Q9Y2L9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRCH1Q9Y2L9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRCH1Q9Y2L9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRCH1Q9Y2L9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.66■■□□□ 1.38
LRCH1Q9Y2L9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.66■■□□□ 1.38
LRCH1Q9Y2L9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRCH1Q9Y2L9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRCH1Q9Y2L9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRCH1Q9Y2L9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.65■■□□□ 1.38
LRCH1Q9Y2L9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
LRCH1Q9Y2L9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
LRCH1Q9Y2L9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.65■■□□□ 1.38
LRCH1Q9Y2L9 ERN1-208ENST00000606895 2068 ntBASIC23.64■■□□□ 1.38
LRCH1Q9Y2L9 LINC00543-201ENST00000567234 1845 ntBASIC23.64■■□□□ 1.38
LRCH1Q9Y2L9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms