Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AL157400.5-201ENST00000507624 621 ntBASIC23.68■■□□□ 1.38
CHD6Q8TD26 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.67■■□□□ 1.38
CHD6Q8TD26 AC026202.3-201ENST00000600805 1127 ntBASIC23.67■■□□□ 1.38
CHD6Q8TD26 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHD6Q8TD26 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.66■■□□□ 1.38
CHD6Q8TD26 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD6Q8TD26 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CHD6Q8TD26 AC005837.3-201ENST00000612163 286 ntBASIC23.66■■□□□ 1.38
CHD6Q8TD26 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.65■■□□□ 1.38
CHD6Q8TD26 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.65■■□□□ 1.38
CHD6Q8TD26 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
CHD6Q8TD26 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.65■■□□□ 1.38
CHD6Q8TD26 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD6Q8TD26 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.64■■□□□ 1.37
CHD6Q8TD26 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.64■■□□□ 1.37
CHD6Q8TD26 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHD6Q8TD26 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHD6Q8TD26 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHD6Q8TD26 AC139795.1-202ENST00000500444 432 ntBASIC23.63■■□□□ 1.37
CHD6Q8TD26 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD6Q8TD26 MIR219A2-201ENST00000608502 1504 ntBASIC23.62■■□□□ 1.37
CHD6Q8TD26 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHD6Q8TD26 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD6Q8TD26 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.61■■□□□ 1.37
CHD6Q8TD26 AL031848.2-201ENST00000607670 837 ntBASIC23.61■■□□□ 1.37
CHD6Q8TD26 PVT1_1.1-201ENST00000615125 194 ntBASIC23.6■■□□□ 1.37
CHD6Q8TD26 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.6■■□□□ 1.37
CHD6Q8TD26 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD6Q8TD26 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.59■■□□□ 1.37
CHD6Q8TD26 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD6Q8TD26 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD6Q8TD26 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD6Q8TD26 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
CHD6Q8TD26 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
CHD6Q8TD26 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHD6Q8TD26 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD6Q8TD26 AC110285.6-201ENST00000617652 491 ntBASIC23.57■■□□□ 1.36
CHD6Q8TD26 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD6Q8TD26 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.57■■□□□ 1.36
CHD6Q8TD26 RAP2CP1-202ENST00000605179 643 ntBASIC23.57■■□□□ 1.36
CHD6Q8TD26 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHD6Q8TD26 ZNRF2P3-201ENST00000424200 374 ntBASIC23.56■■□□□ 1.36
CHD6Q8TD26 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.56■■□□□ 1.36
CHD6Q8TD26 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.56■■□□□ 1.36
CHD6Q8TD26 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHD6Q8TD26 MIR5787-201ENST00000611784 55 ntBASIC23.55■■□□□ 1.36
CHD6Q8TD26 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD6Q8TD26 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.55■■□□□ 1.36
CHD6Q8TD26 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD6Q8TD26 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHD6Q8TD26 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD6Q8TD26 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHD6Q8TD26 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD6Q8TD26 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHD6Q8TD26 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHD6Q8TD26 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD6Q8TD26 AC120057.4-201ENST00000624722 1615 ntBASIC23.53■■□□□ 1.36
CHD6Q8TD26 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC23.53■■□□□ 1.36
CHD6Q8TD26 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.53■■□□□ 1.36
CHD6Q8TD26 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CHD6Q8TD26 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.52■■□□□ 1.36
CHD6Q8TD26 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.52■■□□□ 1.36
CHD6Q8TD26 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD6Q8TD26 AC131281.2-201ENST00000520478 145 ntBASIC23.51■■□□□ 1.35
CHD6Q8TD26 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
CHD6Q8TD26 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD6Q8TD26 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.51■■□□□ 1.35
CHD6Q8TD26 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD6Q8TD26 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHD6Q8TD26 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD6Q8TD26 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.5■■□□□ 1.35
CHD6Q8TD26 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.49■■□□□ 1.35
CHD6Q8TD26 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.49■■□□□ 1.35
CHD6Q8TD26 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.48■■□□□ 1.35
CHD6Q8TD26 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.48■■□□□ 1.35
CHD6Q8TD26 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.47■■□□□ 1.35
CHD6Q8TD26 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHD6Q8TD26 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
CHD6Q8TD26 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.46■■□□□ 1.35
CHD6Q8TD26 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD6Q8TD26 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHD6Q8TD26 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD6Q8TD26 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.45■■□□□ 1.34
CHD6Q8TD26 AC135279.3-201ENST00000610945 1311 ntBASIC23.44■■□□□ 1.34
CHD6Q8TD26 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD6Q8TD26 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD6Q8TD26 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
CHD6Q8TD26 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD6Q8TD26 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD6Q8TD26 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.44■■□□□ 1.34
CHD6Q8TD26 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD6Q8TD26 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD6Q8TD26 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms