Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
NPAS4Q8IUM7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
NPAS4Q8IUM7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.41■■□□□ 1.98
NPAS4Q8IUM7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
NPAS4Q8IUM7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.4■■□□□ 1.98
NPAS4Q8IUM7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
NPAS4Q8IUM7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.4■■□□□ 1.98
NPAS4Q8IUM7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.39■■□□□ 1.98
NPAS4Q8IUM7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.39■■□□□ 1.98
NPAS4Q8IUM7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
NPAS4Q8IUM7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
NPAS4Q8IUM7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
NPAS4Q8IUM7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
NPAS4Q8IUM7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.38■■□□□ 1.97
NPAS4Q8IUM7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
NPAS4Q8IUM7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
NPAS4Q8IUM7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.37■■□□□ 1.97
NPAS4Q8IUM7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
NPAS4Q8IUM7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
NPAS4Q8IUM7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
NPAS4Q8IUM7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.36■■□□□ 1.97
NPAS4Q8IUM7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
NPAS4Q8IUM7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
NPAS4Q8IUM7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.34■■□□□ 1.97
NPAS4Q8IUM7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
NPAS4Q8IUM7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.34■■□□□ 1.97
NPAS4Q8IUM7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
NPAS4Q8IUM7 AC007029.1-201ENST00000604183 313 ntBASIC27.34■■□□□ 1.97
NPAS4Q8IUM7 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.34■■□□□ 1.97
NPAS4Q8IUM7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
NPAS4Q8IUM7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
NPAS4Q8IUM7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
NPAS4Q8IUM7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.33■■□□□ 1.97
NPAS4Q8IUM7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.33■■□□□ 1.97
NPAS4Q8IUM7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.33■■□□□ 1.97
NPAS4Q8IUM7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.32■■□□□ 1.96
NPAS4Q8IUM7 AC100797.4-201ENST00000631653 1827 ntBASIC27.32■■□□□ 1.96
NPAS4Q8IUM7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
NPAS4Q8IUM7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.31■■□□□ 1.96
NPAS4Q8IUM7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
NPAS4Q8IUM7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
NPAS4Q8IUM7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.31■■□□□ 1.96
NPAS4Q8IUM7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.31■■□□□ 1.96
NPAS4Q8IUM7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
NPAS4Q8IUM7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
NPAS4Q8IUM7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
NPAS4Q8IUM7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NPAS4Q8IUM7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NPAS4Q8IUM7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
NPAS4Q8IUM7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.29■■□□□ 1.96
NPAS4Q8IUM7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
NPAS4Q8IUM7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
NPAS4Q8IUM7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NPAS4Q8IUM7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NPAS4Q8IUM7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.28■■□□□ 1.96
NPAS4Q8IUM7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NPAS4Q8IUM7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.28■■□□□ 1.96
NPAS4Q8IUM7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.28■■□□□ 1.96
NPAS4Q8IUM7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NPAS4Q8IUM7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
NPAS4Q8IUM7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
NPAS4Q8IUM7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NPAS4Q8IUM7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.27■■□□□ 1.96
NPAS4Q8IUM7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
NPAS4Q8IUM7 AL359258.2-201ENST00000564063 1566 ntBASIC27.26■■□□□ 1.95
NPAS4Q8IUM7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
NPAS4Q8IUM7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
NPAS4Q8IUM7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
NPAS4Q8IUM7 AC009831.1-201ENST00000580420 1582 ntBASIC27.24■■□□□ 1.95
NPAS4Q8IUM7 AC129492.7-201ENST00000622992 756 ntBASIC27.24■■□□□ 1.95
NPAS4Q8IUM7 SMPD5-203ENST00000639008 1464 ntBASIC27.24■■□□□ 1.95
NPAS4Q8IUM7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NPAS4Q8IUM7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NPAS4Q8IUM7 AC133552.2-201ENST00000619106 1032 ntBASIC27.23■■□□□ 1.95
NPAS4Q8IUM7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
NPAS4Q8IUM7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.22■■□□□ 1.95
NPAS4Q8IUM7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
NPAS4Q8IUM7 AL592293.1-201ENST00000502889 1188 ntBASIC27.22■■□□□ 1.95
NPAS4Q8IUM7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
NPAS4Q8IUM7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
NPAS4Q8IUM7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.21■■□□□ 1.95
NPAS4Q8IUM7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
NPAS4Q8IUM7 RARRES2P1-201ENST00000474487 481 ntBASIC27.21■■□□□ 1.95
NPAS4Q8IUM7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
NPAS4Q8IUM7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
NPAS4Q8IUM7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
NPAS4Q8IUM7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
NPAS4Q8IUM7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
NPAS4Q8IUM7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.18■■□□□ 1.94
NPAS4Q8IUM7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.18■■□□□ 1.94
NPAS4Q8IUM7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.18■■□□□ 1.94
NPAS4Q8IUM7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
NPAS4Q8IUM7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
NPAS4Q8IUM7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
NPAS4Q8IUM7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.17■■□□□ 1.94
NPAS4Q8IUM7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.16■■□□□ 1.94
NPAS4Q8IUM7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
NPAS4Q8IUM7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.16■■□□□ 1.94
NPAS4Q8IUM7 AC025884.2-201ENST00000553429 711 ntBASIC27.16■■□□□ 1.94
NPAS4Q8IUM7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms