Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.62■■□□□ 1.05
ATPAF1Q5TC12 AP004833.2-201ENST00000532228 1454 ntBASIC21.62■■□□□ 1.05
ATPAF1Q5TC12 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATPAF1Q5TC12 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.62■■□□□ 1.05
ATPAF1Q5TC12 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATPAF1Q5TC12 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
ATPAF1Q5TC12 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATPAF1Q5TC12 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATPAF1Q5TC12 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ATPAF1Q5TC12 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATPAF1Q5TC12 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.6■■□□□ 1.05
ATPAF1Q5TC12 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.6■■□□□ 1.05
ATPAF1Q5TC12 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATPAF1Q5TC12 LINC00273-201ENST00000539813 1452 ntBASIC21.59■■□□□ 1.05
ATPAF1Q5TC12 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ATPAF1Q5TC12 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATPAF1Q5TC12 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ATPAF1Q5TC12 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.59■■□□□ 1.05
ATPAF1Q5TC12 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.59■■□□□ 1.05
ATPAF1Q5TC12 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATPAF1Q5TC12 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.59■■□□□ 1.05
ATPAF1Q5TC12 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.59■■□□□ 1.05
ATPAF1Q5TC12 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.59■■□□□ 1.05
ATPAF1Q5TC12 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATPAF1Q5TC12 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
ATPAF1Q5TC12 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
ATPAF1Q5TC12 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATPAF1Q5TC12 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATPAF1Q5TC12 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATPAF1Q5TC12 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.57■■□□□ 1.04
ATPAF1Q5TC12 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.57■■□□□ 1.04
ATPAF1Q5TC12 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.57■■□□□ 1.04
ATPAF1Q5TC12 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
ATPAF1Q5TC12 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.57■■□□□ 1.04
ATPAF1Q5TC12 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.56■■□□□ 1.04
ATPAF1Q5TC12 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATPAF1Q5TC12 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ATPAF1Q5TC12 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATPAF1Q5TC12 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.56■■□□□ 1.04
ATPAF1Q5TC12 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATPAF1Q5TC12 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATPAF1Q5TC12 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ATPAF1Q5TC12 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ATPAF1Q5TC12 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
ATPAF1Q5TC12 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATPAF1Q5TC12 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATPAF1Q5TC12 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATPAF1Q5TC12 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATPAF1Q5TC12 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATPAF1Q5TC12 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATPAF1Q5TC12 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ATPAF1Q5TC12 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATPAF1Q5TC12 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATPAF1Q5TC12 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATPAF1Q5TC12 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATPAF1Q5TC12 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATPAF1Q5TC12 LINC01003-201ENST00000564834 1764 ntBASIC21.53■■□□□ 1.04
ATPAF1Q5TC12 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATPAF1Q5TC12 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.53■■□□□ 1.04
ATPAF1Q5TC12 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATPAF1Q5TC12 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.52■■□□□ 1.04
ATPAF1Q5TC12 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.52■■□□□ 1.04
ATPAF1Q5TC12 AC135983.2-203ENST00000454486 1613 ntBASIC21.52■■□□□ 1.04
ATPAF1Q5TC12 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.52■■□□□ 1.04
ATPAF1Q5TC12 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATPAF1Q5TC12 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATPAF1Q5TC12 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATPAF1Q5TC12 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
ATPAF1Q5TC12 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATPAF1Q5TC12 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.51■■□□□ 1.03
ATPAF1Q5TC12 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
ATPAF1Q5TC12 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATPAF1Q5TC12 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATPAF1Q5TC12 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATPAF1Q5TC12 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATPAF1Q5TC12 ABHD17AP4-201ENST00000411545 909 ntBASIC21.5■■□□□ 1.03
ATPAF1Q5TC12 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.5■■□□□ 1.03
ATPAF1Q5TC12 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATPAF1Q5TC12 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.49■■□□□ 1.03
ATPAF1Q5TC12 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATPAF1Q5TC12 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.48■■□□□ 1.03
ATPAF1Q5TC12 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATPAF1Q5TC12 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.48■■□□□ 1.03
ATPAF1Q5TC12 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.48■■□□□ 1.03
ATPAF1Q5TC12 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATPAF1Q5TC12 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATPAF1Q5TC12 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATPAF1Q5TC12 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATPAF1Q5TC12 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATPAF1Q5TC12 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
ATPAF1Q5TC12 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATPAF1Q5TC12 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.47■■□□□ 1.03
ATPAF1Q5TC12 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.47■■□□□ 1.03
ATPAF1Q5TC12 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ATPAF1Q5TC12 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.46■■□□□ 1.03
ATPAF1Q5TC12 ZNRF2P2-203ENST00000454624 420 ntBASIC21.46■■□□□ 1.03
ATPAF1Q5TC12 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ATPAF1Q5TC12 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATPAF1Q5TC12 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATPAF1Q5TC12 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms