Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01556Q5JQF7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LINC01556Q5JQF7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.16■□□□□ 0.34
LINC01556Q5JQF7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
LINC01556Q5JQF7 AC142086.6-201ENST00000621154 1765 ntBASIC17.15■□□□□ 0.34
LINC01556Q5JQF7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.15■□□□□ 0.34
LINC01556Q5JQF7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LINC01556Q5JQF7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LINC01556Q5JQF7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LINC01556Q5JQF7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LINC01556Q5JQF7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01556Q5JQF7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.14■□□□□ 0.33
LINC01556Q5JQF7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.14■□□□□ 0.33
LINC01556Q5JQF7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.14■□□□□ 0.33
LINC01556Q5JQF7 AC148477.6-201ENST00000623746 465 ntBASIC17.14■□□□□ 0.33
LINC01556Q5JQF7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01556Q5JQF7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LINC01556Q5JQF7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01556Q5JQF7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC01556Q5JQF7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01556Q5JQF7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01556Q5JQF7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01556Q5JQF7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
LINC01556Q5JQF7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01556Q5JQF7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC01556Q5JQF7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01556Q5JQF7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LINC01556Q5JQF7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01556Q5JQF7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01556Q5JQF7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01556Q5JQF7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01556Q5JQF7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01556Q5JQF7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01556Q5JQF7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01556Q5JQF7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
LINC01556Q5JQF7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LINC01556Q5JQF7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01556Q5JQF7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01556Q5JQF7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01556Q5JQF7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
LINC01556Q5JQF7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01556Q5JQF7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC01556Q5JQF7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01556Q5JQF7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LINC01556Q5JQF7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01556Q5JQF7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC01556Q5JQF7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01556Q5JQF7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
LINC01556Q5JQF7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01556Q5JQF7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01556Q5JQF7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC01556Q5JQF7 MIR4449-201ENST00000578365 66 ntBASIC17.08■□□□□ 0.32
LINC01556Q5JQF7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01556Q5JQF7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LINC01556Q5JQF7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC01556Q5JQF7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01556Q5JQF7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LINC01556Q5JQF7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC01556Q5JQF7 MIR219A2-201ENST00000608502 1504 ntBASIC17.06■□□□□ 0.32
LINC01556Q5JQF7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LINC01556Q5JQF7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01556Q5JQF7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01556Q5JQF7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01556Q5JQF7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
LINC01556Q5JQF7 LINC01003-201ENST00000564834 1764 ntBASIC17.06■□□□□ 0.32
LINC01556Q5JQF7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01556Q5JQF7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC01556Q5JQF7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LINC01556Q5JQF7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01556Q5JQF7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01556Q5JQF7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01556Q5JQF7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC01556Q5JQF7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01556Q5JQF7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01556Q5JQF7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01556Q5JQF7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01556Q5JQF7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01556Q5JQF7 BX255925.1-201ENST00000566954 1854 ntBASIC17.05■□□□□ 0.32
LINC01556Q5JQF7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01556Q5JQF7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01556Q5JQF7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01556Q5JQF7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
LINC01556Q5JQF7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.03■□□□□ 0.32
LINC01556Q5JQF7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
LINC01556Q5JQF7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01556Q5JQF7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01556Q5JQF7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.03■□□□□ 0.32
LINC01556Q5JQF7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01556Q5JQF7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01556Q5JQF7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01556Q5JQF7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01556Q5JQF7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.02■□□□□ 0.32
LINC01556Q5JQF7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01556Q5JQF7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01556Q5JQF7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01556Q5JQF7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01556Q5JQF7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01556Q5JQF7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01556Q5JQF7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01556Q5JQF7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms