Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRFAM7AQ494W8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHRFAM7AQ494W8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHRFAM7AQ494W8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHRFAM7AQ494W8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.74■■□□□ 1.07
CHRFAM7AQ494W8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CHRFAM7AQ494W8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHRFAM7AQ494W8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHRFAM7AQ494W8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRFAM7AQ494W8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRFAM7AQ494W8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRFAM7AQ494W8 RARRES2P2-201ENST00000394842 485 ntBASIC21.73■■□□□ 1.07
CHRFAM7AQ494W8 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.73■■□□□ 1.07
CHRFAM7AQ494W8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.73■■□□□ 1.07
CHRFAM7AQ494W8 ABHD17AP5-201ENST00000580133 923 ntBASIC21.73■■□□□ 1.07
CHRFAM7AQ494W8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHRFAM7AQ494W8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHRFAM7AQ494W8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRFAM7AQ494W8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRFAM7AQ494W8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHRFAM7AQ494W8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.72■■□□□ 1.07
CHRFAM7AQ494W8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.72■■□□□ 1.07
CHRFAM7AQ494W8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CHRFAM7AQ494W8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHRFAM7AQ494W8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.71■■□□□ 1.07
CHRFAM7AQ494W8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.71■■□□□ 1.07
CHRFAM7AQ494W8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CHRFAM7AQ494W8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.7■■□□□ 1.06
CHRFAM7AQ494W8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRFAM7AQ494W8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHRFAM7AQ494W8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRFAM7AQ494W8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CHRFAM7AQ494W8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.7■■□□□ 1.06
CHRFAM7AQ494W8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 BX255925.1-201ENST00000566954 1854 ntBASIC21.69■■□□□ 1.06
CHRFAM7AQ494W8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRFAM7AQ494W8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.68■■□□□ 1.06
CHRFAM7AQ494W8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRFAM7AQ494W8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.67■■□□□ 1.06
CHRFAM7AQ494W8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHRFAM7AQ494W8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRFAM7AQ494W8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CHRFAM7AQ494W8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.66■■□□□ 1.06
CHRFAM7AQ494W8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHRFAM7AQ494W8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHRFAM7AQ494W8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.65■■□□□ 1.06
CHRFAM7AQ494W8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CHRFAM7AQ494W8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRFAM7AQ494W8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CHRFAM7AQ494W8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRFAM7AQ494W8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRFAM7AQ494W8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CHRFAM7AQ494W8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHRFAM7AQ494W8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CHRFAM7AQ494W8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.64■■□□□ 1.05
CHRFAM7AQ494W8 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.64■■□□□ 1.05
CHRFAM7AQ494W8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHRFAM7AQ494W8 AP004833.2-201ENST00000532228 1454 ntBASIC21.64■■□□□ 1.05
CHRFAM7AQ494W8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHRFAM7AQ494W8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.63■■□□□ 1.05
CHRFAM7AQ494W8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHRFAM7AQ494W8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHRFAM7AQ494W8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHRFAM7AQ494W8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHRFAM7AQ494W8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CHRFAM7AQ494W8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHRFAM7AQ494W8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHRFAM7AQ494W8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.61■■□□□ 1.05
CHRFAM7AQ494W8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHRFAM7AQ494W8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHRFAM7AQ494W8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRFAM7AQ494W8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.6■■□□□ 1.05
CHRFAM7AQ494W8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.6■■□□□ 1.05
CHRFAM7AQ494W8 GPX1-201ENST00000419349 1106 ntBASIC21.6■■□□□ 1.05
CHRFAM7AQ494W8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.6■■□□□ 1.05
CHRFAM7AQ494W8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.6■■□□□ 1.05
CHRFAM7AQ494W8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRFAM7AQ494W8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHRFAM7AQ494W8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRFAM7AQ494W8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRFAM7AQ494W8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHRFAM7AQ494W8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHRFAM7AQ494W8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CHRFAM7AQ494W8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CHRFAM7AQ494W8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.58■■□□□ 1.05
CHRFAM7AQ494W8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.57■■□□□ 1.04
CHRFAM7AQ494W8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms