Protein–RNA interactions for Protein: P98066

TNFAIP6, Tumor necrosis factor-inducible gene 6 protein, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP6P98066 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFAIP6P98066 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TNFAIP6P98066 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFAIP6P98066 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNFAIP6P98066 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNFAIP6P98066 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNFAIP6P98066 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
TNFAIP6P98066 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.41■■□□□ 1.02
TNFAIP6P98066 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFAIP6P98066 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TNFAIP6P98066 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TNFAIP6P98066 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFAIP6P98066 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TNFAIP6P98066 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.4■■□□□ 1.02
TNFAIP6P98066 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
TNFAIP6P98066 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TNFAIP6P98066 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TNFAIP6P98066 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 AC148477.6-201ENST00000623746 465 ntBASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFAIP6P98066 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
TNFAIP6P98066 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.38■■□□□ 1.01
TNFAIP6P98066 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFAIP6P98066 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFAIP6P98066 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFAIP6P98066 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFAIP6P98066 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFAIP6P98066 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TNFAIP6P98066 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TNFAIP6P98066 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TNFAIP6P98066 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
TNFAIP6P98066 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TNFAIP6P98066 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.36■■□□□ 1.01
TNFAIP6P98066 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TNFAIP6P98066 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.35■■□□□ 1.01
TNFAIP6P98066 MIR219A2-201ENST00000608502 1504 ntBASIC21.35■■□□□ 1.01
TNFAIP6P98066 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TNFAIP6P98066 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TNFAIP6P98066 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.35■■□□□ 1.01
TNFAIP6P98066 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.34■■□□□ 1.01
TNFAIP6P98066 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TNFAIP6P98066 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.34■■□□□ 1.01
TNFAIP6P98066 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TNFAIP6P98066 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNFAIP6P98066 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.33■■□□□ 1.01
TNFAIP6P98066 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.33■■□□□ 1.01
TNFAIP6P98066 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.33■■□□□ 1.01
TNFAIP6P98066 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNFAIP6P98066 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNFAIP6P98066 AC018358.1-201ENST00000631079 1402 ntBASIC21.32■■□□□ 1
TNFAIP6P98066 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TNFAIP6P98066 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TNFAIP6P98066 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.32■■□□□ 1
TNFAIP6P98066 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNFAIP6P98066 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNFAIP6P98066 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.31■■□□□ 1
TNFAIP6P98066 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TNFAIP6P98066 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.31■■□□□ 1
TNFAIP6P98066 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.31■■□□□ 1
TNFAIP6P98066 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TNFAIP6P98066 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
TNFAIP6P98066 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNFAIP6P98066 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
TNFAIP6P98066 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNFAIP6P98066 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TNFAIP6P98066 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
TNFAIP6P98066 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNFAIP6P98066 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNFAIP6P98066 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNFAIP6P98066 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFAIP6P98066 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFAIP6P98066 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.28■■□□□ 1
TNFAIP6P98066 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFAIP6P98066 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TNFAIP6P98066 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TNFAIP6P98066 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TNFAIP6P98066 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TNFAIP6P98066 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.27■■□□□ 1
TNFAIP6P98066 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.27■■□□□ 1
TNFAIP6P98066 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.27■■□□□ 1
TNFAIP6P98066 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
TNFAIP6P98066 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TNFAIP6P98066 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNFAIP6P98066 AC142086.6-201ENST00000621154 1765 ntBASIC21.26■□□□□ 0.99
TNFAIP6P98066 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.26■□□□□ 0.99
TNFAIP6P98066 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.26■□□□□ 0.99
TNFAIP6P98066 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TNFAIP6P98066 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFAIP6P98066 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TNFAIP6P98066 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFAIP6P98066 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms