Protein–RNA interactions for Protein: P40227

CCT6A, T-complex protein 1 subunit zeta, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6AP40227 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCT6AP40227 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.43■■■□□ 2.14
CCT6AP40227 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
CCT6AP40227 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CCT6AP40227 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CCT6AP40227 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.42■■■□□ 2.14
CCT6AP40227 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CCT6AP40227 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.41■■■□□ 2.14
CCT6AP40227 MIR3648-2-201ENST00000581792 180 ntBASIC28.41■■■□□ 2.14
CCT6AP40227 MIR3648-1-201ENST00000615959 180 ntBASIC28.41■■■□□ 2.14
CCT6AP40227 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.41■■■□□ 2.14
CCT6AP40227 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCT6AP40227 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CCT6AP40227 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CCT6AP40227 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.39■■■□□ 2.14
CCT6AP40227 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CCT6AP40227 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CCT6AP40227 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCT6AP40227 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCT6AP40227 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CCT6AP40227 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
CCT6AP40227 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCT6AP40227 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.37■■■□□ 2.13
CCT6AP40227 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCT6AP40227 AC016575.1-201ENST00000607026 382 ntBASIC28.37■■■□□ 2.13
CCT6AP40227 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.37■■■□□ 2.13
CCT6AP40227 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCT6AP40227 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCT6AP40227 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CCT6AP40227 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
CCT6AP40227 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CCT6AP40227 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
CCT6AP40227 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
CCT6AP40227 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
CCT6AP40227 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCT6AP40227 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.33■■■□□ 2.13
CCT6AP40227 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CCT6AP40227 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
CCT6AP40227 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCT6AP40227 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
CCT6AP40227 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.31■■■□□ 2.12
CCT6AP40227 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCT6AP40227 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCT6AP40227 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCT6AP40227 AC018358.1-201ENST00000631079 1402 ntBASIC28.3■■■□□ 2.12
CCT6AP40227 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCT6AP40227 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.3■■■□□ 2.12
CCT6AP40227 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCT6AP40227 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.3■■■□□ 2.12
CCT6AP40227 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CCT6AP40227 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCT6AP40227 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.28■■■□□ 2.12
CCT6AP40227 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCT6AP40227 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.27■■■□□ 2.12
CCT6AP40227 LINC01003-201ENST00000564834 1764 ntBASIC28.27■■■□□ 2.12
CCT6AP40227 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCT6AP40227 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CCT6AP40227 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCT6AP40227 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CCT6AP40227 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCT6AP40227 AC008813.1-201ENST00000536597 885 ntBASIC28.25■■■□□ 2.11
CCT6AP40227 AL121749.1-202ENST00000609313 2153 ntBASIC28.25■■■□□ 2.11
CCT6AP40227 BX255925.1-201ENST00000566954 1854 ntBASIC28.25■■■□□ 2.11
CCT6AP40227 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.24■■■□□ 2.11
CCT6AP40227 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCT6AP40227 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCT6AP40227 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
CCT6AP40227 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCT6AP40227 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCT6AP40227 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.23■■■□□ 2.11
CCT6AP40227 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.23■■■□□ 2.11
CCT6AP40227 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCT6AP40227 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCT6AP40227 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CCT6AP40227 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCT6AP40227 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
CCT6AP40227 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.22■■■□□ 2.11
CCT6AP40227 HLA-V-202ENST00000446817 847 ntBASIC28.22■■■□□ 2.11
CCT6AP40227 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.21■■■□□ 2.11
CCT6AP40227 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CCT6AP40227 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCT6AP40227 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
CCT6AP40227 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
CCT6AP40227 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
CCT6AP40227 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
CCT6AP40227 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.2■■■□□ 2.1
CCT6AP40227 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCT6AP40227 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCT6AP40227 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCT6AP40227 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CCT6AP40227 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCT6AP40227 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.18■■■□□ 2.1
CCT6AP40227 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.18■■■□□ 2.1
CCT6AP40227 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCT6AP40227 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
CCT6AP40227 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCT6AP40227 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCT6AP40227 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
CCT6AP40227 MIR639-201ENST00000384974 98 ntBASIC28.17■■■□□ 2.1
CCT6AP40227 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms