Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 LINC00273-201ENST00000539813 1452 ntBASIC21.25■□□□□ 0.99
ZNF728P0DKX0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF728P0DKX0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF728P0DKX0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ZNF728P0DKX0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.24■□□□□ 0.99
ZNF728P0DKX0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF728P0DKX0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.22■□□□□ 0.99
ZNF728P0DKX0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.22■□□□□ 0.99
ZNF728P0DKX0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
ZNF728P0DKX0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF728P0DKX0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF728P0DKX0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNF728P0DKX0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF728P0DKX0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
ZNF728P0DKX0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.2■□□□□ 0.98
ZNF728P0DKX0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF728P0DKX0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF728P0DKX0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 AC135983.2-203ENST00000454486 1613 ntBASIC21.19■□□□□ 0.98
ZNF728P0DKX0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF728P0DKX0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF728P0DKX0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF728P0DKX0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF728P0DKX0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF728P0DKX0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF728P0DKX0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ZNF728P0DKX0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF728P0DKX0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF728P0DKX0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF728P0DKX0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.15■□□□□ 0.98
ZNF728P0DKX0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF728P0DKX0 WHAMMP2-203ENST00000563942 1603 ntBASIC21.15■□□□□ 0.98
ZNF728P0DKX0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF728P0DKX0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF728P0DKX0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF728P0DKX0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF728P0DKX0 AC100797.4-201ENST00000631653 1827 ntBASIC21.13■□□□□ 0.97
ZNF728P0DKX0 AC135731.1-201ENST00000569415 2548 ntBASIC21.13■□□□□ 0.97
ZNF728P0DKX0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF728P0DKX0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF728P0DKX0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF728P0DKX0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF728P0DKX0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF728P0DKX0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF728P0DKX0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF728P0DKX0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF728P0DKX0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF728P0DKX0 ABHD17AP4-201ENST00000411545 909 ntBASIC21.11■□□□□ 0.97
ZNF728P0DKX0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF728P0DKX0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF728P0DKX0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF728P0DKX0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.1■□□□□ 0.97
ZNF728P0DKX0 ZNRF2P2-203ENST00000454624 420 ntBASIC21.1■□□□□ 0.97
ZNF728P0DKX0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.1■□□□□ 0.97
ZNF728P0DKX0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.09■□□□□ 0.97
ZNF728P0DKX0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms