Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SOX1O00570 AC026202.3-201ENST00000600805 1127 ntBASIC27.62■■■□□ 2.01
SOX1O00570 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
SOX1O00570 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.61■■■□□ 2.01
SOX1O00570 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.61■■■□□ 2.01
SOX1O00570 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
SOX1O00570 SPCS2P3-201ENST00000500401 656 ntBASIC27.6■■■□□ 2.01
SOX1O00570 AC126177.7-201ENST00000547904 679 ntBASIC27.6■■■□□ 2.01
SOX1O00570 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SOX1O00570 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
SOX1O00570 AC135983.2-203ENST00000454486 1613 ntBASIC27.59■■■□□ 2.01
SOX1O00570 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
SOX1O00570 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.59■■■□□ 2.01
SOX1O00570 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.59■■■□□ 2.01
SOX1O00570 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.59■■■□□ 2.01
SOX1O00570 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
SOX1O00570 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SOX1O00570 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.58■■■□□ 2.01
SOX1O00570 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.58■■■□□ 2.01
SOX1O00570 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
SOX1O00570 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2
SOX1O00570 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.58■■■□□ 2
SOX1O00570 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
SOX1O00570 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SOX1O00570 AC139795.1-202ENST00000500444 432 ntBASIC27.57■■■□□ 2
SOX1O00570 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.57■■■□□ 2
SOX1O00570 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
SOX1O00570 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.57■■■□□ 2
SOX1O00570 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SOX1O00570 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
SOX1O00570 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.56■■■□□ 2
SOX1O00570 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.56■■■□□ 2
SOX1O00570 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.56■■■□□ 2
SOX1O00570 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
SOX1O00570 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
SOX1O00570 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.56■■■□□ 2
SOX1O00570 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
SOX1O00570 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
SOX1O00570 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.55■■■□□ 2
SOX1O00570 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
SOX1O00570 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.55■■■□□ 2
SOX1O00570 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
SOX1O00570 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.54■■■□□ 2
SOX1O00570 MIR6765-201ENST00000614092 87 ntBASIC27.54■■■□□ 2
SOX1O00570 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
SOX1O00570 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
SOX1O00570 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
SOX1O00570 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SOX1O00570 MIR4508-201ENST00000584178 70 ntBASIC27.52■■■□□ 2
SOX1O00570 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SOX1O00570 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
SOX1O00570 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.51■■□□□ 1.99
SOX1O00570 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.51■■□□□ 1.99
SOX1O00570 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SOX1O00570 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SOX1O00570 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SOX1O00570 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SOX1O00570 AC103724.3-201ENST00000564481 992 ntBASIC27.5■■□□□ 1.99
SOX1O00570 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SOX1O00570 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
SOX1O00570 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SOX1O00570 AL031848.2-201ENST00000607670 837 ntBASIC27.49■■□□□ 1.99
SOX1O00570 AC092666.2-201ENST00000613287 246 ntBASIC27.49■■□□□ 1.99
SOX1O00570 SMPD5-203ENST00000639008 1464 ntBASIC27.49■■□□□ 1.99
SOX1O00570 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SOX1O00570 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SOX1O00570 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SOX1O00570 AC239859.2-201ENST00000444165 318 ntBASIC27.48■■□□□ 1.99
SOX1O00570 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.48■■□□□ 1.99
SOX1O00570 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
SOX1O00570 RALB-208ENST00000631312 311 ntTSL 5 BASIC27.48■■□□□ 1.99
SOX1O00570 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SOX1O00570 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
SOX1O00570 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.47■■□□□ 1.99
SOX1O00570 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.47■■□□□ 1.99
SOX1O00570 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SOX1O00570 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
SOX1O00570 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SOX1O00570 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.46■■□□□ 1.99
SOX1O00570 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SOX1O00570 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SOX1O00570 AC010864.1-201ENST00000609407 1511 ntBASIC27.46■■□□□ 1.99
SOX1O00570 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
SOX1O00570 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.45■■□□□ 1.98
SOX1O00570 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.43■■□□□ 1.98
SOX1O00570 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.43■■□□□ 1.98
SOX1O00570 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.43■■□□□ 1.98
SOX1O00570 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
SOX1O00570 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC27.42■■□□□ 1.98
SOX1O00570 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
SOX1O00570 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SOX1O00570 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.42■■□□□ 1.98
SOX1O00570 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SOX1O00570 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.4■■□□□ 1.98
SOX1O00570 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.4■■□□□ 1.98
SOX1O00570 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
SOX1O00570 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SOX1O00570 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
SOX1O00570 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.4■■□□□ 1.98
SOX1O00570 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms