Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MSGN1A6NI15 AC093323.1-202ENST00000635031 2045 ntBASIC20.75■□□□□ 0.91
MSGN1A6NI15 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MSGN1A6NI15 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSGN1A6NI15 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSGN1A6NI15 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSGN1A6NI15 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSGN1A6NI15 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
MSGN1A6NI15 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
MSGN1A6NI15 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSGN1A6NI15 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSGN1A6NI15 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSGN1A6NI15 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSGN1A6NI15 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSGN1A6NI15 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.73■□□□□ 0.91
MSGN1A6NI15 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSGN1A6NI15 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
MSGN1A6NI15 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSGN1A6NI15 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
MSGN1A6NI15 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MSGN1A6NI15 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MSGN1A6NI15 AC005559.1-201ENST00000589661 871 ntBASIC20.72■□□□□ 0.91
MSGN1A6NI15 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.71■□□□□ 0.91
MSGN1A6NI15 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSGN1A6NI15 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MSGN1A6NI15 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MSGN1A6NI15 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSGN1A6NI15 AP004833.2-201ENST00000532228 1454 ntBASIC20.7■□□□□ 0.9
MSGN1A6NI15 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSGN1A6NI15 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.7■□□□□ 0.9
MSGN1A6NI15 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
MSGN1A6NI15 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.7■□□□□ 0.9
MSGN1A6NI15 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSGN1A6NI15 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSGN1A6NI15 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSGN1A6NI15 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSGN1A6NI15 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSGN1A6NI15 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
MSGN1A6NI15 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSGN1A6NI15 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSGN1A6NI15 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSGN1A6NI15 AC145676.1-201ENST00000514988 2004 ntBASIC20.68■□□□□ 0.9
MSGN1A6NI15 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSGN1A6NI15 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSGN1A6NI15 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSGN1A6NI15 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSGN1A6NI15 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MSGN1A6NI15 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MSGN1A6NI15 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
MSGN1A6NI15 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MSGN1A6NI15 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MSGN1A6NI15 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.66■□□□□ 0.9
MSGN1A6NI15 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
MSGN1A6NI15 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSGN1A6NI15 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.66■□□□□ 0.9
MSGN1A6NI15 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MSGN1A6NI15 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.65■□□□□ 0.9
MSGN1A6NI15 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSGN1A6NI15 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.64■□□□□ 0.89
MSGN1A6NI15 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.64■□□□□ 0.89
MSGN1A6NI15 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
MSGN1A6NI15 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSGN1A6NI15 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MSGN1A6NI15 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
MSGN1A6NI15 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.63■□□□□ 0.89
MSGN1A6NI15 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.63■□□□□ 0.89
MSGN1A6NI15 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MSGN1A6NI15 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSGN1A6NI15 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSGN1A6NI15 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSGN1A6NI15 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.62■□□□□ 0.89
MSGN1A6NI15 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSGN1A6NI15 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSGN1A6NI15 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MSGN1A6NI15 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.62■□□□□ 0.89
MSGN1A6NI15 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSGN1A6NI15 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.62■□□□□ 0.89
MSGN1A6NI15 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.62■□□□□ 0.89
MSGN1A6NI15 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.61■□□□□ 0.89
MSGN1A6NI15 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
MSGN1A6NI15 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.61■□□□□ 0.89
MSGN1A6NI15 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.61■□□□□ 0.89
MSGN1A6NI15 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.6■□□□□ 0.89
MSGN1A6NI15 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MSGN1A6NI15 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MSGN1A6NI15 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
MSGN1A6NI15 MIR3665-201ENST00000578708 105 ntBASIC20.6■□□□□ 0.89
MSGN1A6NI15 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.6■□□□□ 0.89
MSGN1A6NI15 DUX4L28-201ENST00000623687 678 ntBASIC20.6■□□□□ 0.89
MSGN1A6NI15 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MSGN1A6NI15 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.6■□□□□ 0.89
MSGN1A6NI15 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSGN1A6NI15 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSGN1A6NI15 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.59■□□□□ 0.89
MSGN1A6NI15 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MSGN1A6NI15 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.58■□□□□ 0.89
MSGN1A6NI15 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSGN1A6NI15 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSGN1A6NI15 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSGN1A6NI15 AP006261.1-201ENST00000584783 668 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms