Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV6-1A0A0K0K1D8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV6-1A0A0K0K1D8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRBV6-1A0A0K0K1D8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRBV6-1A0A0K0K1D8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRBV6-1A0A0K0K1D8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
TRBV6-1A0A0K0K1D8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-1A0A0K0K1D8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRBV6-1A0A0K0K1D8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRBV6-1A0A0K0K1D8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV6-1A0A0K0K1D8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-1A0A0K0K1D8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-1A0A0K0K1D8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV6-1A0A0K0K1D8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRBV6-1A0A0K0K1D8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV6-1A0A0K0K1D8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.84■□□□□ 0.61
TRBV6-1A0A0K0K1D8 AC092803.2-201ENST00000564287 1899 ntBASIC18.84■□□□□ 0.61
TRBV6-1A0A0K0K1D8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.83■□□□□ 0.61
TRBV6-1A0A0K0K1D8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV6-1A0A0K0K1D8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV6-1A0A0K0K1D8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.83■□□□□ 0.6
TRBV6-1A0A0K0K1D8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRBV6-1A0A0K0K1D8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRBV6-1A0A0K0K1D8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-1A0A0K0K1D8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-1A0A0K0K1D8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-1A0A0K0K1D8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.82■□□□□ 0.6
TRBV6-1A0A0K0K1D8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-1A0A0K0K1D8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.81■□□□□ 0.6
TRBV6-1A0A0K0K1D8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV6-1A0A0K0K1D8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV6-1A0A0K0K1D8 AC135983.2-203ENST00000454486 1613 ntBASIC18.81■□□□□ 0.6
TRBV6-1A0A0K0K1D8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRBV6-1A0A0K0K1D8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-1A0A0K0K1D8 SETD8P1-201ENST00000623146 1180 ntBASIC18.8■□□□□ 0.6
TRBV6-1A0A0K0K1D8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRBV6-1A0A0K0K1D8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
TRBV6-1A0A0K0K1D8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-1A0A0K0K1D8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-1A0A0K0K1D8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-1A0A0K0K1D8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRBV6-1A0A0K0K1D8 AL391121.1-201ENST00000607967 1349 ntBASIC18.78■□□□□ 0.6
TRBV6-1A0A0K0K1D8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-1A0A0K0K1D8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.78■□□□□ 0.6
TRBV6-1A0A0K0K1D8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-1A0A0K0K1D8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-1A0A0K0K1D8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-1A0A0K0K1D8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-1A0A0K0K1D8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-1A0A0K0K1D8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-1A0A0K0K1D8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV6-1A0A0K0K1D8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TRBV6-1A0A0K0K1D8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV6-1A0A0K0K1D8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV6-1A0A0K0K1D8 RARRES2P7-201ENST00000567349 469 ntBASIC18.77■□□□□ 0.6
TRBV6-1A0A0K0K1D8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRBV6-1A0A0K0K1D8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.77■□□□□ 0.6
TRBV6-1A0A0K0K1D8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-1A0A0K0K1D8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRBV6-1A0A0K0K1D8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-1A0A0K0K1D8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-1A0A0K0K1D8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-1A0A0K0K1D8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-1A0A0K0K1D8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV6-1A0A0K0K1D8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV6-1A0A0K0K1D8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-1A0A0K0K1D8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-1A0A0K0K1D8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-1A0A0K0K1D8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.74■□□□□ 0.59
TRBV6-1A0A0K0K1D8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-1A0A0K0K1D8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-1A0A0K0K1D8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-1A0A0K0K1D8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-1A0A0K0K1D8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-1A0A0K0K1D8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.73■□□□□ 0.59
TRBV6-1A0A0K0K1D8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.73■□□□□ 0.59
TRBV6-1A0A0K0K1D8 AC093323.1-202ENST00000635031 2045 ntBASIC18.73■□□□□ 0.59
TRBV6-1A0A0K0K1D8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-1A0A0K0K1D8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-1A0A0K0K1D8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-1A0A0K0K1D8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV6-1A0A0K0K1D8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-1A0A0K0K1D8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRBV6-1A0A0K0K1D8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-1A0A0K0K1D8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
TRBV6-1A0A0K0K1D8 AP004609.3-201ENST00000610705 1884 ntBASIC18.71■□□□□ 0.59
TRBV6-1A0A0K0K1D8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRBV6-1A0A0K0K1D8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV6-1A0A0K0K1D8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.7■□□□□ 0.58
TRBV6-1A0A0K0K1D8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.7■□□□□ 0.58
TRBV6-1A0A0K0K1D8 WHAMMP2-203ENST00000563942 1603 ntBASIC18.7■□□□□ 0.58
TRBV6-1A0A0K0K1D8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV6-1A0A0K0K1D8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRBV6-1A0A0K0K1D8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV6-1A0A0K0K1D8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV6-1A0A0K0K1D8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV6-1A0A0K0K1D8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV6-1A0A0K0K1D8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV6-1A0A0K0K1D8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV6-1A0A0K0K1D8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms