Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AC020928.2-201ENST00000588717 2197 ntBASIC17.77■□□□□ 0.43
TRBV27A0A0K0K1C4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
TRBV27A0A0K0K1C4 AL391121.1-201ENST00000607967 1349 ntBASIC17.76■□□□□ 0.43
TRBV27A0A0K0K1C4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV27A0A0K0K1C4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV27A0A0K0K1C4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV27A0A0K0K1C4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV27A0A0K0K1C4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV27A0A0K0K1C4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRBV27A0A0K0K1C4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRBV27A0A0K0K1C4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV27A0A0K0K1C4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV27A0A0K0K1C4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV27A0A0K0K1C4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV27A0A0K0K1C4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRBV27A0A0K0K1C4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV27A0A0K0K1C4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV27A0A0K0K1C4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV27A0A0K0K1C4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV27A0A0K0K1C4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV27A0A0K0K1C4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRBV27A0A0K0K1C4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.74■□□□□ 0.43
TRBV27A0A0K0K1C4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV27A0A0K0K1C4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRBV27A0A0K0K1C4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV27A0A0K0K1C4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV27A0A0K0K1C4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV27A0A0K0K1C4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV27A0A0K0K1C4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV27A0A0K0K1C4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRBV27A0A0K0K1C4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV27A0A0K0K1C4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV27A0A0K0K1C4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRBV27A0A0K0K1C4 AC135983.2-203ENST00000454486 1613 ntBASIC17.72■□□□□ 0.43
TRBV27A0A0K0K1C4 DUSP8P4-201ENST00000399538 1761 ntBASIC17.71■□□□□ 0.43
TRBV27A0A0K0K1C4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV27A0A0K0K1C4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRBV27A0A0K0K1C4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV27A0A0K0K1C4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV27A0A0K0K1C4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRBV27A0A0K0K1C4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV27A0A0K0K1C4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRBV27A0A0K0K1C4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC17.7■□□□□ 0.42
TRBV27A0A0K0K1C4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV27A0A0K0K1C4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV27A0A0K0K1C4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRBV27A0A0K0K1C4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV27A0A0K0K1C4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
TRBV27A0A0K0K1C4 AC092803.2-201ENST00000564287 1899 ntBASIC17.68■□□□□ 0.42
TRBV27A0A0K0K1C4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV27A0A0K0K1C4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV27A0A0K0K1C4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TRBV27A0A0K0K1C4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV27A0A0K0K1C4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV27A0A0K0K1C4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV27A0A0K0K1C4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV27A0A0K0K1C4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV27A0A0K0K1C4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRBV27A0A0K0K1C4 CAHM-201ENST00000604200 896 ntBASIC17.66■□□□□ 0.42
TRBV27A0A0K0K1C4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV27A0A0K0K1C4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV27A0A0K0K1C4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRBV27A0A0K0K1C4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV27A0A0K0K1C4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV27A0A0K0K1C4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV27A0A0K0K1C4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV27A0A0K0K1C4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV27A0A0K0K1C4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV27A0A0K0K1C4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV27A0A0K0K1C4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
TRBV27A0A0K0K1C4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV27A0A0K0K1C4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV27A0A0K0K1C4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV27A0A0K0K1C4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV27A0A0K0K1C4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV27A0A0K0K1C4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV27A0A0K0K1C4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV27A0A0K0K1C4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV27A0A0K0K1C4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRBV27A0A0K0K1C4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.64■□□□□ 0.41
TRBV27A0A0K0K1C4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV27A0A0K0K1C4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV27A0A0K0K1C4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV27A0A0K0K1C4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV27A0A0K0K1C4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRBV27A0A0K0K1C4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV27A0A0K0K1C4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV27A0A0K0K1C4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV27A0A0K0K1C4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRBV27A0A0K0K1C4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRBV27A0A0K0K1C4 WHAMMP2-203ENST00000563942 1603 ntBASIC17.62■□□□□ 0.41
TRBV27A0A0K0K1C4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV27A0A0K0K1C4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV27A0A0K0K1C4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV27A0A0K0K1C4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRBV27A0A0K0K1C4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV27A0A0K0K1C4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV27A0A0K0K1C4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV27A0A0K0K1C4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV27A0A0K0K1C4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms