Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAV5A0A0B4J249 AC097358.2-201ENST00000607541 1159 ntBASIC19.46■□□□□ 0.71
TRAV5A0A0B4J249 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV5A0A0B4J249 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRAV5A0A0B4J249 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAV5A0A0B4J249 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRAV5A0A0B4J249 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV5A0A0B4J249 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRAV5A0A0B4J249 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRAV5A0A0B4J249 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAV5A0A0B4J249 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV5A0A0B4J249 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV5A0A0B4J249 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRAV5A0A0B4J249 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV5A0A0B4J249 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV5A0A0B4J249 AC018358.1-201ENST00000631079 1402 ntBASIC19.43■□□□□ 0.7
TRAV5A0A0B4J249 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV5A0A0B4J249 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV5A0A0B4J249 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV5A0A0B4J249 MIR762-201ENST00000390236 83 ntBASIC19.42■□□□□ 0.7
TRAV5A0A0B4J249 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRAV5A0A0B4J249 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV5A0A0B4J249 AC135983.2-203ENST00000454486 1613 ntBASIC19.41■□□□□ 0.7
TRAV5A0A0B4J249 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAV5A0A0B4J249 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV5A0A0B4J249 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV5A0A0B4J249 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRAV5A0A0B4J249 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV5A0A0B4J249 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV5A0A0B4J249 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV5A0A0B4J249 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAV5A0A0B4J249 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV5A0A0B4J249 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV5A0A0B4J249 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV5A0A0B4J249 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV5A0A0B4J249 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.39■□□□□ 0.69
TRAV5A0A0B4J249 WHAMMP2-203ENST00000563942 1603 ntBASIC19.39■□□□□ 0.69
TRAV5A0A0B4J249 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV5A0A0B4J249 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV5A0A0B4J249 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV5A0A0B4J249 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV5A0A0B4J249 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.38■□□□□ 0.69
TRAV5A0A0B4J249 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV5A0A0B4J249 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAV5A0A0B4J249 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV5A0A0B4J249 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV5A0A0B4J249 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV5A0A0B4J249 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV5A0A0B4J249 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV5A0A0B4J249 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV5A0A0B4J249 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV5A0A0B4J249 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV5A0A0B4J249 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV5A0A0B4J249 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV5A0A0B4J249 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV5A0A0B4J249 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRAV5A0A0B4J249 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV5A0A0B4J249 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRAV5A0A0B4J249 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV5A0A0B4J249 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRAV5A0A0B4J249 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TRAV5A0A0B4J249 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRAV5A0A0B4J249 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV5A0A0B4J249 AC145676.1-201ENST00000514988 2004 ntBASIC19.35■□□□□ 0.69
TRAV5A0A0B4J249 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV5A0A0B4J249 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAV5A0A0B4J249 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV5A0A0B4J249 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRAV5A0A0B4J249 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV5A0A0B4J249 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV5A0A0B4J249 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.34■□□□□ 0.69
TRAV5A0A0B4J249 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV5A0A0B4J249 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV5A0A0B4J249 AC020928.2-201ENST00000588717 2197 ntBASIC19.33■□□□□ 0.69
TRAV5A0A0B4J249 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV5A0A0B4J249 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV5A0A0B4J249 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV5A0A0B4J249 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.33■□□□□ 0.68
TRAV5A0A0B4J249 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV5A0A0B4J249 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.33■□□□□ 0.68
TRAV5A0A0B4J249 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.33■□□□□ 0.68
TRAV5A0A0B4J249 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV5A0A0B4J249 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV5A0A0B4J249 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TRAV5A0A0B4J249 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV5A0A0B4J249 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV5A0A0B4J249 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV5A0A0B4J249 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV5A0A0B4J249 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRAV5A0A0B4J249 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV5A0A0B4J249 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRAV5A0A0B4J249 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV5A0A0B4J249 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.31■□□□□ 0.68
TRAV5A0A0B4J249 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV5A0A0B4J249 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV5A0A0B4J249 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
TRAV5A0A0B4J249 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV5A0A0B4J249 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV5A0A0B4J249 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TRAV5A0A0B4J249 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms