Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRAV12-1A0A0B4J245 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV12-1A0A0B4J245 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV12-1A0A0B4J245 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV12-1A0A0B4J245 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV12-1A0A0B4J245 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV12-1A0A0B4J245 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV12-1A0A0B4J245 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV12-1A0A0B4J245 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRAV12-1A0A0B4J245 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV12-1A0A0B4J245 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV12-1A0A0B4J245 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
TRAV12-1A0A0B4J245 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV12-1A0A0B4J245 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV12-1A0A0B4J245 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV12-1A0A0B4J245 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV12-1A0A0B4J245 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV12-1A0A0B4J245 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV12-1A0A0B4J245 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV12-1A0A0B4J245 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV12-1A0A0B4J245 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV12-1A0A0B4J245 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV12-1A0A0B4J245 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV12-1A0A0B4J245 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV12-1A0A0B4J245 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV12-1A0A0B4J245 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV12-1A0A0B4J245 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV12-1A0A0B4J245 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV12-1A0A0B4J245 AP002414.2-202ENST00000590929 1450 ntBASIC17.63■□□□□ 0.41
TRAV12-1A0A0B4J245 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRAV12-1A0A0B4J245 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV12-1A0A0B4J245 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV12-1A0A0B4J245 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV12-1A0A0B4J245 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV12-1A0A0B4J245 AC092803.2-201ENST00000564287 1899 ntBASIC17.62■□□□□ 0.41
TRAV12-1A0A0B4J245 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV12-1A0A0B4J245 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV12-1A0A0B4J245 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV12-1A0A0B4J245 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV12-1A0A0B4J245 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV12-1A0A0B4J245 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV12-1A0A0B4J245 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV12-1A0A0B4J245 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV12-1A0A0B4J245 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRAV12-1A0A0B4J245 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRAV12-1A0A0B4J245 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRAV12-1A0A0B4J245 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRAV12-1A0A0B4J245 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV12-1A0A0B4J245 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV12-1A0A0B4J245 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV12-1A0A0B4J245 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRAV12-1A0A0B4J245 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV12-1A0A0B4J245 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV12-1A0A0B4J245 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV12-1A0A0B4J245 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV12-1A0A0B4J245 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRAV12-1A0A0B4J245 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV12-1A0A0B4J245 AC100797.4-201ENST00000631653 1827 ntBASIC17.56■□□□□ 0.4
TRAV12-1A0A0B4J245 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV12-1A0A0B4J245 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV12-1A0A0B4J245 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV12-1A0A0B4J245 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAV12-1A0A0B4J245 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAV12-1A0A0B4J245 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV12-1A0A0B4J245 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV12-1A0A0B4J245 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV12-1A0A0B4J245 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV12-1A0A0B4J245 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV12-1A0A0B4J245 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAV12-1A0A0B4J245 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV12-1A0A0B4J245 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRAV12-1A0A0B4J245 AC006077.2-201ENST00000623591 457 ntBASIC17.53■□□□□ 0.4
TRAV12-1A0A0B4J245 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRAV12-1A0A0B4J245 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAV12-1A0A0B4J245 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV12-1A0A0B4J245 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRAV12-1A0A0B4J245 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAV12-1A0A0B4J245 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV12-1A0A0B4J245 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV12-1A0A0B4J245 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRAV12-1A0A0B4J245 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV12-1A0A0B4J245 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.52■□□□□ 0.39
TRAV12-1A0A0B4J245 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRAV12-1A0A0B4J245 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV12-1A0A0B4J245 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV12-1A0A0B4J245 AC018358.1-201ENST00000631079 1402 ntBASIC17.51■□□□□ 0.39
TRAV12-1A0A0B4J245 AC127502.1-201ENST00000399971 1502 ntBASIC17.51■□□□□ 0.39
TRAV12-1A0A0B4J245 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV12-1A0A0B4J245 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV12-1A0A0B4J245 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV12-1A0A0B4J245 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV12-1A0A0B4J245 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAV12-1A0A0B4J245 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV12-1A0A0B4J245 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV12-1A0A0B4J245 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV12-1A0A0B4J245 ERN1-208ENST00000606895 2068 ntBASIC17.49■□□□□ 0.39
TRAV12-1A0A0B4J245 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV12-1A0A0B4J245 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV12-1A0A0B4J245 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV12-1A0A0B4J245 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms