RNA–Protein interactions for RNA: YPR190C

RPC82, Transcript of RNA polymerase III subunit C82, yeastyeast

Gene RPC82, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC82YPR190C SGS1P35187 1447 aa15.27■□□□□ 0.04
RPC82YPR190C SPA2P23201 1466 aaKnown RBP15.17■□□□□ 0.02
RPC82YPR190C SSN2P38931 1420 aa14.98□□□□□ -0.01
RPC82YPR190C INO80P53115 1489 aa14.7□□□□□ -0.06
RPC82YPR190C DRS1P32892 752 aaKnown RBP14.5□□□□□ -0.09
RPC82YPR190C SKI3P17883 1432 aaKnown RBP14.23□□□□□ -0.13
RPC82YPR190C TCB3Q03640 1545 aaKnown RBP14.21□□□□□ -0.13
RPC82YPR190C TY1B-DR4Q07793 1604 aa13.99□□□□□ -0.17
RPC82YPR190C HSL1P34244 1518 aa13.93□□□□□ -0.18
RPC82YPR190C SPT6P23615 1451 aaKnown RBP13.85□□□□□ -0.19
RPC82YPR190C MMS22Q06164 1454 aa13.82□□□□□ -0.2
RPC82YPR190C CHD1P32657 1468 aa13.81□□□□□ -0.2
RPC82YPR190C XRN1P22147 1528 aaKnown RBP13.76□□□□□ -0.21
RPC82YPR190C HIR3P47171 1648 aa13.72□□□□□ -0.21
RPC82YPR190C REV3P14284 1504 aa13.61□□□□□ -0.23
RPC82YPR190C NOP2P40991 618 aaKnown RBP13.61□□□□□ -0.23
RPC82YPR190C NSR1P27476 414 aaKnown RBP RIP-Chip data13.58□□□□□ -0.24not detected
RPC82YPR190C THO2P53552 1597 aaKnown RBP13.57□□□□□ -0.24
RPC82YPR190C SIN3P22579 1536 aa13.54□□□□□ -0.24
RPC82YPR190C SSK2P53599 1579 aa13.51□□□□□ -0.25
RPC82YPR190C UFD4P33202 1483 aa13.49□□□□□ -0.25
RPC82YPR190C RSE1Q04693 1361 aaKnown RBP13.49□□□□□ -0.25
RPC82YPR190C TAF2P23255 1407 aa13.46□□□□□ -0.25
RPC82YPR190C STU1P38198 1513 aa13.4□□□□□ -0.26
RPC82YPR190C TRM732Q03496 1420 aa13.38□□□□□ -0.27
RPC82YPR190C MYO2P19524 1574 aaKnown RBP13.35□□□□□ -0.27
RPC82YPR190C ESP1Q03018 1630 aa13.34□□□□□ -0.27
RPC82YPR190C POL1P13382 1468 aa13.34□□□□□ -0.27
RPC82YPR190C SWR1Q05471 1514 aa13.34□□□□□ -0.27
RPC82YPR190C SAS10Q12136 610 aaPredicted RBP13.33□□□□□ -0.28
RPC82YPR190C YTA7P40340 1379 aa13.31□□□□□ -0.28
RPC82YPR190C IKI3Q06706 1349 aaKnown RBP13.28□□□□□ -0.28
RPC82YPR190C BPT1P14772 1559 aa13.27□□□□□ -0.28
RPC82YPR190C MON2P48563 1636 aaPredicted RBP13.22□□□□□ -0.29
RPC82YPR190C SPP41P38904 1435 aa13.2□□□□□ -0.3
RPC82YPR190C SCC2Q04002 1493 aa13.19□□□□□ -0.3
RPC82YPR190C ECM5Q03214 1411 aa13.14□□□□□ -0.31
RPC82YPR190C YPK9Q12697 1472 aa13.11□□□□□ -0.31
RPC82YPR190C SSM4P40318 1319 aa13.1□□□□□ -0.31
RPC82YPR190C NUP170P38181 1502 aa13.09□□□□□ -0.31
RPC82YPR190C DNA2P38859 1522 aa13.08□□□□□ -0.32
RPC82YPR190C MYO4P32492 1471 aa13.08□□□□□ -0.32
RPC82YPR190C YOR1P53049 1477 aa13.07□□□□□ -0.32
RPC82YPR190C BUD4P47136 1447 aa13.06□□□□□ -0.32
RPC82YPR190C RKR1Q04781 1562 aa13.05□□□□□ -0.32
RPC82YPR190C ENP1P38333 483 aaKnown RBP13.03□□□□□ -0.32
RPC82YPR190C ATG2P53855 1592 aa13.02□□□□□ -0.33
RPC82YPR190C BFR2Q06631 534 aaKnown RBP12.99□□□□□ -0.33
RPC82YPR190C SNQ2P32568 1501 aaKnown RBP12.96□□□□□ -0.33
RPC82YPR190C POL5P39985 1022 aaKnown RBP12.96□□□□□ -0.33
RPC82YPR190C TAF7Q05021 590 aa12.94□□□□□ -0.34
RPC82YPR190C STH1P32597 1359 aa12.94□□□□□ -0.34
RPC82YPR190C SMC4Q12267 1418 aa12.89□□□□□ -0.35
RPC82YPR190C PAN1P32521 1480 aa12.86□□□□□ -0.35
RPC82YPR190C SPT7P35177 1332 aa12.85□□□□□ -0.35
RPC82YPR190C TOP2P06786 1428 aaKnown RBP12.85□□□□□ -0.35
RPC82YPR190C RPO31P04051 1460 aa12.85□□□□□ -0.35
RPC82YPR190C MLP2P40457 1679 aa12.84□□□□□ -0.35
RPC82YPR190C GEA1P47102 1408 aaPredicted RBP12.83□□□□□ -0.35
RPC82YPR190C PDR15Q04182 1529 aaKnown RBP12.82□□□□□ -0.36
RPC82YPR190C IFH1P39520 1085 aa12.81□□□□□ -0.36
RPC82YPR190C RTT106P40161 455 aa12.81□□□□□ -0.36
RPC82YPR190C PEP1P32319 1579 aa12.8□□□□□ -0.36
RPC82YPR190C YCF1P39109 1515 aaKnown RBP12.8□□□□□ -0.36
RPC82YPR190C TSC11P40061 1430 aa12.8□□□□□ -0.36
RPC82YPR190C SEC3P33332 1336 aaKnown RBP12.79□□□□□ -0.36
RPC82YPR190C KOG1P38873 1557 aa12.76□□□□□ -0.37
RPC82YPR190C PDR10P51533 1564 aa12.74□□□□□ -0.37
RPC82YPR190C TY1B-DR3Q99231 1755 aa12.72□□□□□ -0.37
RPC82YPR190C ULS1Q08562 1619 aa12.72□□□□□ -0.37
RPC82YPR190C TY2B-LR1P0C2J3 1770 aa12.69□□□□□ -0.38
RPC82YPR190C TY2B-FP0CX63 1770 aa12.69□□□□□ -0.38
RPC82YPR190C TY2B-GR2P0CX64 1770 aa12.69□□□□□ -0.38
RPC82YPR190C TY2B-CP25384 1770 aa12.69□□□□□ -0.38
RPC82YPR190C TY2B-DR2Q03494 1770 aa12.69□□□□□ -0.38
RPC82YPR190C TY1B-DR1Q03855 1755 aa12.69□□□□□ -0.38
RPC82YPR190C TY2B-DR3Q07791 1770 aaKnown RBP12.69□□□□□ -0.38
RPC82YPR190C TY2B-OR1Q12113 1770 aa12.69□□□□□ -0.38
RPC82YPR190C TY2B-DR1Q12472 1770 aa12.69□□□□□ -0.38
RPC82YPR190C TY2B-OR2Q12501 1770 aa12.69□□□□□ -0.38
RPC82YPR190C TY3B-GQ99315 1547 aa12.67□□□□□ -0.38
RPC82YPR190C PRS1P32895 427 aaKnown RBP12.67□□□□□ -0.38
RPC82YPR190C MDS3P53094 1487 aa12.63□□□□□ -0.39
RPC82YPR190C TY2B-BQ12491 1770 aa12.6□□□□□ -0.39
RPC82YPR190C VPS15P22219 1454 aa12.59□□□□□ -0.39
RPC82YPR190C DNF1P32660 1571 aa12.53□□□□□ -0.4
RPC82YPR190C LEU3P08638 886 aa12.52□□□□□ -0.4
RPC82YPR190C YBT1P32386 1661 aa12.49□□□□□ -0.41
RPC82YPR190C NUP159P40477 1460 aa12.48□□□□□ -0.41
RPC82YPR190C SRB8P25648 1427 aa12.48□□□□□ -0.41
RPC82YPR190C VTH1P40438 1549 aa12.46□□□□□ -0.42
RPC82YPR190C VTH2P40890 1549 aa12.46□□□□□ -0.42
RPC82YPR190C TY1B-HO13535 1793 aa12.46□□□□□ -0.42
RPC82YPR190C TY1B-DR5P0C2I2 1755 aa12.46□□□□□ -0.42
RPC82YPR190C TY1B-DR6P0C2I3 1755 aa12.46□□□□□ -0.42
RPC82YPR190C TY1B-LR2P0C2I5 1755 aa12.46□□□□□ -0.42
RPC82YPR190C TY1B-LR3P0C2I6 1755 aaKnown RBP12.46□□□□□ -0.42
RPC82YPR190C TY1B-PR1P0C2I9 1755 aaKnown RBP12.46□□□□□ -0.42
RPC82YPR190C TY1B-PR2P0C2J0 1756 aa12.46□□□□□ -0.42
RPC82YPR190C TY1B-PR3P0C2J1 1755 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms