RNA–Protein interactions for RNA: YPL262W

FUM1, Transcript of Fumarase, yeastyeast

Gene FUM1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FUM1YPL262W DRS1P32892 752 aaKnown RBP13.55□□□□□ -0.24
FUM1YPL262W MTC1P47018 478 aaKnown RBP13.29□□□□□ -0.28
FUM1YPL262W BFR2Q06631 534 aaKnown RBP11.78□□□□□ -0.52
FUM1YPL262W DIP2Q12220 943 aaPredicted RBP11.47□□□□□ -0.57
FUM1YPL262W AVT3P36062 692 aa11.37□□□□□ -0.59
FUM1YPL262W TFA1P36100 482 aa11.19□□□□□ -0.62
FUM1YPL262W RSE1Q04693 1361 aaKnown RBP10.75□□□□□ -0.69
FUM1YPL262W ISW2Q08773 1120 aa10.73□□□□□ -0.69
FUM1YPL262W FAP1P53971 965 aa10.71□□□□□ -0.69
FUM1YPL262W RPG1P38249 964 aaKnown RBP10.65□□□□□ -0.7
FUM1YPL262W PRI1P10363 409 aa10.58□□□□□ -0.72
FUM1YPL262W RPL17AP05740 184 aaKnown RBP10.37□□□□□ -0.75
FUM1YPL262W RPL17BP46990 184 aaKnown RBP10.37□□□□□ -0.75
FUM1YPL262W AAD16Q02895 342 aa10.36□□□□□ -0.75
FUM1YPL262W REB1P21538 810 aa10.18□□□□□ -0.78
FUM1YPL262W TSR3Q12094 313 aaKnown RBP10.1□□□□□ -0.79
FUM1YPL262W PRY3P47033 881 aa10.03□□□□□ -0.8
FUM1YPL262W SPT21P35209 758 aa10□□□□□ -0.81
FUM1YPL262W RIM101P33400 625 aa9.9□□□□□ -0.83
FUM1YPL262W PTP3P40048 928 aa9.7□□□□□ -0.86
FUM1YPL262W YKR023WP36119 530 aaKnown RBP9.66□□□□□ -0.86
FUM1YPL262W MRPL32P25348 183 aa9.64□□□□□ -0.87
FUM1YPL262W OXP1P28273 1286 aa9.64□□□□□ -0.87
FUM1YPL262W YCK3P39962 524 aa9.58□□□□□ -0.88
FUM1YPL262W RQC2Q12532 1038 aaKnown RBP9.53□□□□□ -0.88
FUM1YPL262W SSP1P38871 571 aa9.53□□□□□ -0.88
FUM1YPL262W YAH1Q12184 172 aaKnown RBP9.52□□□□□ -0.89
FUM1YPL262W HOP09932 586 aa9.48□□□□□ -0.89
FUM1YPL262W TFC8Q12308 588 aa9.44□□□□□ -0.9
FUM1YPL262W DCD1P06773 312 aa9.43□□□□□ -0.9
FUM1YPL262W YIL055CP40523 627 aaKnown RBP9.43□□□□□ -0.9
FUM1YPL262W CDC27P38042 758 aa9.42□□□□□ -0.9
FUM1YPL262W HAA1Q12753 694 aaKnown RBP9.41□□□□□ -0.9
FUM1YPL262W YLR271WQ06152 274 aa9.39□□□□□ -0.91
FUM1YPL262W DMA1P38823 416 aa9.34□□□□□ -0.91
FUM1YPL262W RSM7P47150 247 aa9.3□□□□□ -0.92
FUM1YPL262W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92 RIP-Chip
FUM1YPL262W BCH2P36122 765 aa9.19□□□□□ -0.94
FUM1YPL262W MGA2P40578 1113 aa9.15□□□□□ -0.95
FUM1YPL262W AI2P03876 854 aa9.14□□□□□ -0.95
FUM1YPL262W CST9Q06032 482 aa9.13□□□□□ -0.95
FUM1YPL262W PSD2P53037 1138 aaKnown RBP9.09□□□□□ -0.95
FUM1YPL262W EPS1P40557 701 aa9.03□□□□□ -0.96
FUM1YPL262W BBC1P47068 1157 aa9.02□□□□□ -0.97
FUM1YPL262W SCY1P53009 804 aa9□□□□□ -0.97
FUM1YPL262W MAP2P38174 421 aaKnown RBP8.98□□□□□ -0.97
FUM1YPL262W BDF1P35817 686 aa8.96□□□□□ -0.97
FUM1YPL262W UBP10P53874 792 aaPredicted RBP8.91□□□□□ -0.98
FUM1YPL262W YGL015CP33199 130 aa8.9□□□□□ -0.98
FUM1YPL262W MRM1P25270 412 aa8.89□□□□□ -0.99
FUM1YPL262W RCR1P38212 213 aa8.82□□□□□ -1
FUM1YPL262W RAM2P29703 316 aa8.8□□□□□ -1
FUM1YPL262W SLX5P32828 619 aaKnown RBP8.77□□□□□ -1
FUM1YPL262W RTG3P38165 486 aa8.73□□□□□ -1.01
FUM1YPL262W SAS10Q12136 610 aaPredicted RBP8.72□□□□□ -1.01
FUM1YPL262W SGS1P35187 1447 aa8.68□□□□□ -1.02
FUM1YPL262W INO80P53115 1489 aa8.67□□□□□ -1.02
FUM1YPL262W VPS29P38759 282 aa8.67□□□□□ -1.02
FUM1YPL262W MON2P48563 1636 aaPredicted RBP8.66□□□□□ -1.02
FUM1YPL262W SET1P38827 1080 aaKnown RBP8.62□□□□□ -1.03
FUM1YPL262W MAK11P20484 414 aaKnown RBP8.59□□□□□ -1.03
FUM1YPL262W TCB3Q03640 1545 aaKnown RBP8.56□□□□□ -1.04
FUM1YPL262W STS1P38637 319 aa8.54□□□□□ -1.04
FUM1YPL262W YFR006WP43590 535 aa8.53□□□□□ -1.04
FUM1YPL262W YMR1P47147 688 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
FUM1YPL262W TIF4632P39936 914 aaKnown RBP8.52□□□□□ -1.05
FUM1YPL262W DBP1P24784 617 aaKnown RBP8.51□□□□□ -1.05
FUM1YPL262W COQ8P27697 501 aa8.5□□□□□ -1.05
FUM1YPL262W VPS70P47161 811 aa8.49□□□□□ -1.05
FUM1YPL262W YPR148CQ06523 435 aa8.49□□□□□ -1.05
FUM1YPL262W TGL3P40308 642 aa8.48□□□□□ -1.05
FUM1YPL262W YOR238WQ08634 303 aa8.48□□□□□ -1.05
FUM1YPL262W PIB1Q06651 286 aa8.46□□□□□ -1.05
FUM1YPL262W LEU3P08638 886 aa8.45□□□□□ -1.06
FUM1YPL262W MIF2P35201 549 aa8.45□□□□□ -1.06
FUM1YPL262W EDS1P38073 919 aa8.45□□□□□ -1.06
FUM1YPL262W LEO1P38439 464 aa8.45□□□□□ -1.06
FUM1YPL262W TY1B-DR4Q07793 1604 aa8.44□□□□□ -1.06
FUM1YPL262W NSR1P27476 414 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
FUM1YPL262W IFH1P39520 1085 aa8.4□□□□□ -1.06
FUM1YPL262W YAP5P40574 245 aa8.4□□□□□ -1.06
FUM1YPL262W SWR1Q05471 1514 aa8.39□□□□□ -1.07
FUM1YPL262W CKB1P43639 278 aa8.38□□□□□ -1.07
FUM1YPL262W SPB4P25808 606 aaPredicted RBP8.37□□□□□ -1.07
FUM1YPL262W PTC3P34221 468 aaKnown RBP8.34□□□□□ -1.07
FUM1YPL262W NOP53Q12080 455 aaKnown RBP8.34□□□□□ -1.07
FUM1YPL262W VMA1P17255 1071 aaKnown RBP8.32□□□□□ -1.08
FUM1YPL262W PBS2P08018 668 aa8.27□□□□□ -1.09
FUM1YPL262W MST1P07236 462 aa8.26□□□□□ -1.09
FUM1YPL262W DNA2P38859 1522 aa8.26□□□□□ -1.09
FUM1YPL262W DSF2P38213 736 aa8.25□□□□□ -1.09
FUM1YPL262W HSL1P34244 1518 aa8.24□□□□□ -1.09
FUM1YPL262W REF2P42073 533 aaPredicted RBP8.24□□□□□ -1.09
FUM1YPL262W SPT6P23615 1451 aaKnown RBP8.23□□□□□ -1.09
FUM1YPL262W RPN1P38764 993 aaKnown RBP8.22□□□□□ -1.09
FUM1YPL262W SAM3Q08986 587 aa8.2□□□□□ -1.1
FUM1YPL262W GRE2Q12068 342 aaKnown RBP8.19□□□□□ -1.1
FUM1YPL262W KOG1P38873 1557 aa8.19□□□□□ -1.1
FUM1YPL262W ATH1P48016 1211 aa8.19□□□□□ -1.1
FUM1YPL262W TAF7Q05021 590 aa8.19□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms