RNA–Protein interactions for RNA: YOR359W

VTS1, Transcript of Flap-structured DNA-binding and RNA-binding protein, yeastyeast

Gene VTS1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTS1YOR359W MTC1P47018 478 aaKnown RBP13.77□□□□□ -0.21
VTS1YOR359W FAP1P53971 965 aa12.9□□□□□ -0.34
VTS1YOR359W DRS1P32892 752 aaKnown RBP12.41□□□□□ -0.42
VTS1YOR359W PRY3P47033 881 aa12.17□□□□□ -0.46
VTS1YOR359W PRI1P10363 409 aa11.86□□□□□ -0.51
VTS1YOR359W AAD16Q02895 342 aa11.83□□□□□ -0.52
VTS1YOR359W YCK3P39962 524 aa11.53□□□□□ -0.56
VTS1YOR359W ISW2Q08773 1120 aa11.47□□□□□ -0.57
VTS1YOR359W RPG1P38249 964 aaKnown RBP11.4□□□□□ -0.58
VTS1YOR359W HAA1Q12753 694 aaKnown RBP11.33□□□□□ -0.6
VTS1YOR359W TSR3Q12094 313 aaKnown RBP11.22□□□□□ -0.61
VTS1YOR359W DIP2Q12220 943 aaPredicted RBP11.03□□□□□ -0.64
VTS1YOR359W RSE1Q04693 1361 aaKnown RBP10.78□□□□□ -0.68
VTS1YOR359W RQC2Q12532 1038 aaKnown RBP10.76□□□□□ -0.69
VTS1YOR359W BFR2Q06631 534 aaKnown RBP10.74□□□□□ -0.69
VTS1YOR359W MRPL32P25348 183 aa10.72□□□□□ -0.69
VTS1YOR359W AVT3P36062 692 aa10.51□□□□□ -0.73
VTS1YOR359W RPL17AP05740 184 aaKnown RBP10.5□□□□□ -0.73
VTS1YOR359W RPL17BP46990 184 aaKnown RBP10.5□□□□□ -0.73
VTS1YOR359W REB1P21538 810 aa10.47□□□□□ -0.73
VTS1YOR359W YGL015CP33199 130 aa10.37□□□□□ -0.75
VTS1YOR359W CDC27P38042 758 aa10.18□□□□□ -0.78
VTS1YOR359W SPT21P35209 758 aa10.04□□□□□ -0.8
VTS1YOR359W YKR023WP36119 530 aaKnown RBP10.01□□□□□ -0.81
VTS1YOR359W NOP2P40991 618 aaKnown RBP9.92□□□□□ -0.82
VTS1YOR359W MAP2P38174 421 aaKnown RBP9.89□□□□□ -0.83
VTS1YOR359W UBP10P53874 792 aaPredicted RBP9.88□□□□□ -0.83
VTS1YOR359W DCD1P06773 312 aa9.82□□□□□ -0.84
VTS1YOR359W HOP09932 586 aa9.82□□□□□ -0.84
VTS1YOR359W TFC8Q12308 588 aa9.8□□□□□ -0.84
VTS1YOR359W BUD31P25337 157 aaPredicted RBP9.75□□□□□ -0.85
VTS1YOR359W EBP2P36049 427 aaKnown RBP9.73□□□□□ -0.85
VTS1YOR359W CAB3P36076 571 aa9.72□□□□□ -0.85
VTS1YOR359W URN1Q06525 465 aaKnown RBP9.71□□□□□ -0.85
VTS1YOR359W SCY1P53009 804 aa9.61□□□□□ -0.87
VTS1YOR359W RIM101P33400 625 aa9.54□□□□□ -0.88
VTS1YOR359W SIS2P36024 562 aa9.53□□□□□ -0.88
VTS1YOR359W TAF7Q05021 590 aa9.52□□□□□ -0.89
VTS1YOR359W SLX5P32828 619 aaKnown RBP9.48□□□□□ -0.89
VTS1YOR359W BCH2P36122 765 aa9.46□□□□□ -0.9
VTS1YOR359W TIF4632P39936 914 aaKnown RBP9.44□□□□□ -0.9
VTS1YOR359W NSR1P27476 414 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9not detected
VTS1YOR359W TGL3P40308 642 aa9.41□□□□□ -0.9
VTS1YOR359W SKI3P17883 1432 aaKnown RBP9.33□□□□□ -0.92
VTS1YOR359W UBP9P39967 754 aa9.24□□□□□ -0.93
VTS1YOR359W SIS1P25294 352 aaKnown RBP9.23□□□□□ -0.93
VTS1YOR359W OXP1P28273 1286 aa9.23□□□□□ -0.93
VTS1YOR359W SPA2P23201 1466 aaKnown RBP9.22□□□□□ -0.93
VTS1YOR359W EPS1P40557 701 aa9.2□□□□□ -0.94
VTS1YOR359W YPR148CQ06523 435 aa9.2□□□□□ -0.94
VTS1YOR359W BDF1P35817 686 aa9.16□□□□□ -0.94
VTS1YOR359W YFR016CP43597 1233 aaKnown RBP9.16□□□□□ -0.94
VTS1YOR359W PTP3P40048 928 aa9.09□□□□□ -0.95
VTS1YOR359W RPS0BP46654 252 aaKnown RBP9.08□□□□□ -0.96
VTS1YOR359W YIL055CP40523 627 aaKnown RBP9.03□□□□□ -0.96
VTS1YOR359W MST1P07236 462 aa8.97□□□□□ -0.97
VTS1YOR359W TCB2P48231 1178 aa8.96□□□□□ -0.97
VTS1YOR359W YBL029C-AQ3E756 94 aa8.96□□□□□ -0.97
VTS1YOR359W TCB3Q03640 1545 aaKnown RBP8.96□□□□□ -0.97
VTS1YOR359W RSM7P47150 247 aa8.93□□□□□ -0.98
VTS1YOR359W MNN4P36044 1178 aa8.92□□□□□ -0.98
VTS1YOR359W YRB30P53107 440 aaPredicted RBP8.92□□□□□ -0.98
VTS1YOR359W YOR238WQ08634 303 aa8.92□□□□□ -0.98
VTS1YOR359W YAH1Q12184 172 aaKnown RBP8.91□□□□□ -0.98
VTS1YOR359W AI2P03876 854 aa8.9□□□□□ -0.98
VTS1YOR359W BBC1P47068 1157 aa8.9□□□□□ -0.98
VTS1YOR359W ENP1P38333 483 aaKnown RBP8.87□□□□□ -0.99
VTS1YOR359W SSN2P38931 1420 aa8.87□□□□□ -0.99
VTS1YOR359W KRI1P42846 591 aaKnown RBP8.83□□□□□ -1
VTS1YOR359W CWC22P53333 577 aaKnown RBP8.82□□□□□ -1
VTS1YOR359W YAP5P40574 245 aa8.82□□□□□ -1
VTS1YOR359W VNX1P42839 908 aa8.81□□□□□ -1
VTS1YOR359W QCR6P00127 147 aa8.78□□□□□ -1
VTS1YOR359W WSC3Q12215 556 aa8.76□□□□□ -1.01
VTS1YOR359W RLF2Q12495 606 aa8.75□□□□□ -1.01
VTS1YOR359W AIM44Q99299 758 aa8.75□□□□□ -1.01
VTS1YOR359W LEO1P38439 464 aa8.73□□□□□ -1.01
VTS1YOR359W YLR271WQ06152 274 aa8.73□□□□□ -1.01
VTS1YOR359W TFA1P36100 482 aa8.73□□□□□ -1.01
VTS1YOR359W DEF1P35732 738 aaKnown RBP8.72□□□□□ -1.01
VTS1YOR359W SPP1Q03012 353 aa8.72□□□□□ -1.01
VTS1YOR359W NOP53Q12080 455 aaKnown RBP8.71□□□□□ -1.02
VTS1YOR359W SGS1P35187 1447 aa8.71□□□□□ -1.02
VTS1YOR359W CLC1P17891 233 aa8.69□□□□□ -1.02
VTS1YOR359W NUG1P40010 520 aaKnown RBP8.68□□□□□ -1.02
VTS1YOR359W SEC3P33332 1336 aaKnown RBP8.68□□□□□ -1.02
VTS1YOR359W STH1P32597 1359 aa8.67□□□□□ -1.02
VTS1YOR359W PSD2P53037 1138 aaKnown RBP8.65□□□□□ -1.02
VTS1YOR359W FPR3P38911 411 aaKnown RBP8.65□□□□□ -1.03
VTS1YOR359W GTT3P39996 337 aa8.64□□□□□ -1.03
VTS1YOR359W ENV11P53246 860 aa8.64□□□□□ -1.03
VTS1YOR359W YGR130CP53278 816 aa8.63□□□□□ -1.03
VTS1YOR359W PIB1Q06651 286 aa8.62□□□□□ -1.03
VTS1YOR359W TIF11P38912 153 aaKnown RBP8.61□□□□□ -1.03
VTS1YOR359W RIX1P38883 763 aaPredicted RBP8.61□□□□□ -1.03
VTS1YOR359W SPT7P35177 1332 aa8.6□□□□□ -1.03
VTS1YOR359W FKH1P40466 484 aa8.6□□□□□ -1.03
VTS1YOR359W AIR2Q12476 344 aaKnown RBP8.6□□□□□ -1.03
VTS1YOR359W NAP1P25293 417 aaKnown RBP8.58□□□□□ -1.04
VTS1YOR359W IME2P32581 645 aa8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms