RNA–Protein interactions for RNA: YOR228C

MCP1, Transcript of Mitochondrial protein of unknown function involved in lipid homeostasis, yeastyeast

Gene MCP1, Length 909 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCP1YOR228C INO80P53115 1489 aa15.03■□□□□ -0
MCP1YOR228C MON2P48563 1636 aaPredicted RBP14.94□□□□□ -0.02
MCP1YOR228C DNA2P38859 1522 aa14.29□□□□□ -0.12
MCP1YOR228C SWR1Q05471 1514 aa14.23□□□□□ -0.13
MCP1YOR228C TCB3Q03640 1545 aaKnown RBP14.12□□□□□ -0.15
MCP1YOR228C KOG1P38873 1557 aa14.03□□□□□ -0.16
MCP1YOR228C TY1B-DR4Q07793 1604 aa14.02□□□□□ -0.16
MCP1YOR228C SGS1P35187 1447 aa13.93□□□□□ -0.18
MCP1YOR228C RSE1Q04693 1361 aaKnown RBP13.86□□□□□ -0.19
MCP1YOR228C SPT6P23615 1451 aaKnown RBP13.57□□□□□ -0.24
MCP1YOR228C HSL1P34244 1518 aa13.55□□□□□ -0.24
MCP1YOR228C SPA2P23201 1466 aaKnown RBP13.44□□□□□ -0.26
MCP1YOR228C ECM5Q03214 1411 aa13.38□□□□□ -0.27
MCP1YOR228C HIR3P47171 1648 aa13.26□□□□□ -0.29
MCP1YOR228C BUD4P47136 1447 aa13.21□□□□□ -0.3
MCP1YOR228C MTC1P47018 478 aaKnown RBP13.2□□□□□ -0.3
MCP1YOR228C THO2P53552 1597 aaKnown RBP13.15□□□□□ -0.3
MCP1YOR228C MDS3P53094 1487 aa13.05□□□□□ -0.32
MCP1YOR228C XRN1P22147 1528 aaKnown RBP13.04□□□□□ -0.32
MCP1YOR228C PEP1P32319 1579 aa12.91□□□□□ -0.34
MCP1YOR228C REV3P14284 1504 aa12.84□□□□□ -0.35
MCP1YOR228C ATG2P53855 1592 aa12.79□□□□□ -0.36
MCP1YOR228C SSN2P38931 1420 aa12.75□□□□□ -0.37
MCP1YOR228C BPT1P14772 1559 aa12.73□□□□□ -0.37
MCP1YOR228C TAF2P23255 1407 aa12.71□□□□□ -0.38
MCP1YOR228C SKI3P17883 1432 aaKnown RBP12.69□□□□□ -0.38
MCP1YOR228C SIN3P22579 1536 aa12.56□□□□□ -0.4
MCP1YOR228C YCF1P39109 1515 aaKnown RBP12.5□□□□□ -0.41
MCP1YOR228C SSK2P53599 1579 aa12.49□□□□□ -0.41
MCP1YOR228C UFD4P33202 1483 aa12.44□□□□□ -0.42
MCP1YOR228C DRS1P32892 752 aaKnown RBP12.41□□□□□ -0.42
MCP1YOR228C ESP1Q03018 1630 aa12.4□□□□□ -0.42
MCP1YOR228C SCC2Q04002 1493 aa12.3□□□□□ -0.44
MCP1YOR228C YPK9Q12697 1472 aa12.3□□□□□ -0.44
MCP1YOR228C RQC2Q12532 1038 aaKnown RBP12.25□□□□□ -0.45
MCP1YOR228C RPO31P04051 1460 aa12.24□□□□□ -0.45
MCP1YOR228C CHD1P32657 1468 aa12.24□□□□□ -0.45
MCP1YOR228C MET5P47169 1442 aa12.2□□□□□ -0.46
MCP1YOR228C MYO2P19524 1574 aaKnown RBP12.2□□□□□ -0.46
MCP1YOR228C CDC25P04821 1589 aa12.18□□□□□ -0.46
MCP1YOR228C DNF1P32660 1571 aa12.17□□□□□ -0.46
MCP1YOR228C MIF2P35201 549 aa12.14□□□□□ -0.47
MCP1YOR228C PAN1P32521 1480 aa12.11□□□□□ -0.47
MCP1YOR228C LTE1P07866 1435 aa12.09□□□□□ -0.47
MCP1YOR228C TY2B-LR1P0C2J3 1770 aa12.08□□□□□ -0.48
MCP1YOR228C TY2B-FP0CX63 1770 aa12.08□□□□□ -0.48
MCP1YOR228C TY2B-GR2P0CX64 1770 aa12.08□□□□□ -0.48
MCP1YOR228C TY2B-CP25384 1770 aa12.08□□□□□ -0.48
MCP1YOR228C TY2B-DR2Q03494 1770 aa12.08□□□□□ -0.48
MCP1YOR228C TY1B-DR1Q03855 1755 aa12.08□□□□□ -0.48
MCP1YOR228C TY2B-DR3Q07791 1770 aaKnown RBP12.08□□□□□ -0.48
MCP1YOR228C TY2B-OR1Q12113 1770 aa12.08□□□□□ -0.48
MCP1YOR228C TY2B-DR1Q12472 1770 aa12.08□□□□□ -0.48
MCP1YOR228C TY2B-OR2Q12501 1770 aa12.08□□□□□ -0.48
MCP1YOR228C ESC1Q03661 1658 aaKnown RBP12.08□□□□□ -0.48
MCP1YOR228C TY1B-BRQ12193 1756 aa12.05□□□□□ -0.48
MCP1YOR228C TY1B-GR3Q12316 1755 aa12.05□□□□□ -0.48
MCP1YOR228C TY1B-ORQ92393 1755 aa12.05□□□□□ -0.48
MCP1YOR228C TOP2P06786 1428 aaKnown RBP12.04□□□□□ -0.48
MCP1YOR228C RKR1Q04781 1562 aa12.03□□□□□ -0.48
MCP1YOR228C ITT1Q04638 464 aa11.99□□□□□ -0.49
MCP1YOR228C RPA190P10964 1664 aaKnown RBP11.97□□□□□ -0.49
MCP1YOR228C MMS22Q06164 1454 aa11.97□□□□□ -0.49
MCP1YOR228C BNI1P41832 1953 aa11.94□□□□□ -0.5
MCP1YOR228C TRM732Q03496 1420 aa11.93□□□□□ -0.5
MCP1YOR228C TY2B-BQ12491 1770 aa11.92□□□□□ -0.5
MCP1YOR228C TY1B-HO13535 1793 aa11.92□□□□□ -0.5
MCP1YOR228C TY1B-DR5P0C2I2 1755 aa11.92□□□□□ -0.5
MCP1YOR228C TY1B-DR6P0C2I3 1755 aa11.92□□□□□ -0.5
MCP1YOR228C TY1B-LR2P0C2I5 1755 aa11.92□□□□□ -0.5
MCP1YOR228C TY1B-LR3P0C2I6 1755 aaKnown RBP11.92□□□□□ -0.5
MCP1YOR228C TY1B-PR1P0C2I9 1755 aaKnown RBP11.92□□□□□ -0.5
MCP1YOR228C TY1B-PR2P0C2J0 1756 aa11.92□□□□□ -0.5
MCP1YOR228C TY1B-PR3P0C2J1 1755 aaKnown RBP11.92□□□□□ -0.5
MCP1YOR228C TY1B-JR1P47098 1755 aa11.92□□□□□ -0.5
MCP1YOR228C TY1B-ML2Q03434 1755 aaKnown RBP11.92□□□□□ -0.5
MCP1YOR228C TY1B-ER1Q03612 1755 aa11.92□□□□□ -0.5
MCP1YOR228C TY1B-ML1Q04711 1755 aaKnown RBP11.92□□□□□ -0.5
MCP1YOR228C TY1B-GR2Q12269 1755 aa11.92□□□□□ -0.5
MCP1YOR228C TY1B-OLQ12273 1755 aa11.92□□□□□ -0.5
MCP1YOR228C TY1B-PLQ12414 1755 aaKnown RBP11.92□□□□□ -0.5
MCP1YOR228C GEA2P39993 1459 aaKnown RBP11.91□□□□□ -0.5
MCP1YOR228C ABP1P15891 592 aaKnown RBP11.89□□□□□ -0.51
MCP1YOR228C TY1B-DR3Q99231 1755 aa11.89□□□□□ -0.51
MCP1YOR228C POL1P13382 1468 aa11.87□□□□□ -0.51
MCP1YOR228C SMC4Q12267 1418 aa11.83□□□□□ -0.52
MCP1YOR228C SPP41P38904 1435 aa11.82□□□□□ -0.52
MCP1YOR228C MMS1Q06211 1407 aa11.8□□□□□ -0.52
MCP1YOR228C NUP159P40477 1460 aa11.8□□□□□ -0.52
MCP1YOR228C YOR1P53049 1477 aa11.8□□□□□ -0.52
MCP1YOR228C STU1P38198 1513 aa11.79□□□□□ -0.52
MCP1YOR228C DRS2P39524 1355 aa11.77□□□□□ -0.53
MCP1YOR228C YRF1-1P0CX20 1796 aa11.75□□□□□ -0.53
MCP1YOR228C YRF1-5P0CX21 1796 aa11.75□□□□□ -0.53
MCP1YOR228C YRF1-8P0CX22 1796 aa11.75□□□□□ -0.53
MCP1YOR228C YFR006WP43590 535 aa11.74□□□□□ -0.53
MCP1YOR228C VPS15P22219 1454 aa11.74□□□□□ -0.53
MCP1YOR228C TSC11P40061 1430 aa11.73□□□□□ -0.53
MCP1YOR228C TY1B-JR2P47100 1755 aaKnown RBP11.67□□□□□ -0.54
MCP1YOR228C TY1B-ER2Q03619 1755 aa11.67□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms