RNA–Protein interactions for RNA: YNR055C

HOL1, Transcript of Putative transporter in the major facilitator superfamily, yeastyeast

Gene HOL1, Length 1,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HOL1YNR055C DRS1P32892 752 aaKnown RBP15.7■□□□□ 0.1
HOL1YNR055C MTC1P47018 478 aaKnown RBP14.91□□□□□ -0.02
HOL1YNR055C SGS1P35187 1447 aa14.65□□□□□ -0.06
HOL1YNR055C SPA2P23201 1466 aaKnown RBP14.55□□□□□ -0.08
HOL1YNR055C SSN2P38931 1420 aa14.38□□□□□ -0.11
HOL1YNR055C INO80P53115 1489 aa14.05□□□□□ -0.16
HOL1YNR055C BFR2Q06631 534 aaKnown RBP13.89□□□□□ -0.19
HOL1YNR055C SKI3P17883 1432 aaKnown RBP13.7□□□□□ -0.22
HOL1YNR055C TCB3Q03640 1545 aaKnown RBP13.58□□□□□ -0.24
HOL1YNR055C TFA1P36100 482 aa13.57□□□□□ -0.24
HOL1YNR055C TY1B-DR4Q07793 1604 aa13.36□□□□□ -0.27
HOL1YNR055C HSL1P34244 1518 aa13.31□□□□□ -0.28
HOL1YNR055C MMS22Q06164 1454 aa13.28□□□□□ -0.28
HOL1YNR055C CHD1P32657 1468 aa13.25□□□□□ -0.29
HOL1YNR055C SPT6P23615 1451 aaKnown RBP13.24□□□□□ -0.29
HOL1YNR055C NOP2P40991 618 aaKnown RBP13.23□□□□□ -0.29
HOL1YNR055C XRN1P22147 1528 aaKnown RBP13.18□□□□□ -0.3
HOL1YNR055C NSR1P27476 414 aaKnown RBP RIP-Chip data13.17□□□□□ -0.3not detected
HOL1YNR055C DIP2Q12220 943 aaPredicted RBP13.14□□□□□ -0.31
HOL1YNR055C AVT3P36062 692 aa13.13□□□□□ -0.31
HOL1YNR055C HIR3P47171 1648 aa13.13□□□□□ -0.31
HOL1YNR055C MON2P48563 1636 aaPredicted RBP13.11□□□□□ -0.31
HOL1YNR055C RSE1Q04693 1361 aaKnown RBP13.03□□□□□ -0.32
HOL1YNR055C REV3P14284 1504 aa13.03□□□□□ -0.32
HOL1YNR055C THO2P53552 1597 aaKnown RBP13□□□□□ -0.33
HOL1YNR055C UFD4P33202 1483 aa12.97□□□□□ -0.33
HOL1YNR055C SIN3P22579 1536 aa12.94□□□□□ -0.34
HOL1YNR055C SSK2P53599 1579 aa12.93□□□□□ -0.34
HOL1YNR055C TAF2P23255 1407 aa12.92□□□□□ -0.34
HOL1YNR055C TRM732Q03496 1420 aa12.87□□□□□ -0.35
HOL1YNR055C STU1P38198 1513 aa12.85□□□□□ -0.35
HOL1YNR055C SAS10Q12136 610 aaPredicted RBP12.85□□□□□ -0.35
HOL1YNR055C ESP1Q03018 1630 aa12.78□□□□□ -0.36
HOL1YNR055C MYO2P19524 1574 aaKnown RBP12.78□□□□□ -0.36
HOL1YNR055C IKI3Q06706 1349 aaKnown RBP12.77□□□□□ -0.36
HOL1YNR055C POL1P13382 1468 aa12.77□□□□□ -0.36
HOL1YNR055C YTA7P40340 1379 aa12.76□□□□□ -0.37
HOL1YNR055C BPT1P14772 1559 aa12.75□□□□□ -0.37
HOL1YNR055C SWR1Q05471 1514 aa12.73□□□□□ -0.37
HOL1YNR055C SPP41P38904 1435 aa12.71□□□□□ -0.38
HOL1YNR055C SCC2Q04002 1493 aa12.67□□□□□ -0.38
HOL1YNR055C SSM4P40318 1319 aa12.61□□□□□ -0.39
HOL1YNR055C ENP1P38333 483 aaKnown RBP12.61□□□□□ -0.39
HOL1YNR055C ECM5Q03214 1411 aa12.57□□□□□ -0.4
HOL1YNR055C NUP170P38181 1502 aa12.56□□□□□ -0.4
HOL1YNR055C DNA2P38859 1522 aa12.54□□□□□ -0.4
HOL1YNR055C YPK9Q12697 1472 aa12.54□□□□□ -0.4
HOL1YNR055C POL5P39985 1022 aaKnown RBP12.53□□□□□ -0.4
HOL1YNR055C MYO4P32492 1471 aa12.52□□□□□ -0.4
HOL1YNR055C YOR1P53049 1477 aa12.52□□□□□ -0.41
HOL1YNR055C RKR1Q04781 1562 aa12.51□□□□□ -0.41
HOL1YNR055C BUD4P47136 1447 aa12.49□□□□□ -0.41
HOL1YNR055C TAF7Q05021 590 aa12.45□□□□□ -0.42
HOL1YNR055C ATG2P53855 1592 aa12.44□□□□□ -0.42
HOL1YNR055C SNQ2P32568 1501 aaKnown RBP12.44□□□□□ -0.42
HOL1YNR055C SPT7P35177 1332 aa12.43□□□□□ -0.42
HOL1YNR055C STH1P32597 1359 aa12.43□□□□□ -0.42
HOL1YNR055C RTT106P40161 455 aa12.38□□□□□ -0.43
HOL1YNR055C SMC4Q12267 1418 aa12.37□□□□□ -0.43
HOL1YNR055C PAN1P32521 1480 aa12.36□□□□□ -0.43
HOL1YNR055C IFH1P39520 1085 aa12.35□□□□□ -0.43
HOL1YNR055C SEC3P33332 1336 aaKnown RBP12.34□□□□□ -0.43
HOL1YNR055C RQC2Q12532 1038 aaKnown RBP12.33□□□□□ -0.44
HOL1YNR055C MLP2P40457 1679 aa12.32□□□□□ -0.44
HOL1YNR055C GEA1P47102 1408 aaPredicted RBP12.32□□□□□ -0.44
HOL1YNR055C TSC11P40061 1430 aa12.31□□□□□ -0.44
HOL1YNR055C PDR15Q04182 1529 aaKnown RBP12.31□□□□□ -0.44
HOL1YNR055C RPO31P04051 1460 aa12.3□□□□□ -0.44
HOL1YNR055C TOP2P06786 1428 aaKnown RBP12.29□□□□□ -0.44
HOL1YNR055C YCF1P39109 1515 aaKnown RBP12.29□□□□□ -0.44
HOL1YNR055C PDR10P51533 1564 aa12.28□□□□□ -0.44
HOL1YNR055C PRS1P32895 427 aaKnown RBP12.27□□□□□ -0.45
HOL1YNR055C PEP1P32319 1579 aa12.25□□□□□ -0.45
HOL1YNR055C KOG1P38873 1557 aa12.25□□□□□ -0.45
HOL1YNR055C TY1B-DR3Q99231 1755 aa12.2□□□□□ -0.46
HOL1YNR055C ULS1Q08562 1619 aa12.2□□□□□ -0.46
HOL1YNR055C TY2B-LR1P0C2J3 1770 aa12.16□□□□□ -0.46
HOL1YNR055C TY2B-FP0CX63 1770 aa12.16□□□□□ -0.46
HOL1YNR055C TY2B-GR2P0CX64 1770 aa12.16□□□□□ -0.46
HOL1YNR055C TY2B-CP25384 1770 aa12.16□□□□□ -0.46
HOL1YNR055C TY2B-DR2Q03494 1770 aa12.16□□□□□ -0.46
HOL1YNR055C TY1B-DR1Q03855 1755 aa12.16□□□□□ -0.46
HOL1YNR055C TY2B-DR3Q07791 1770 aaKnown RBP12.16□□□□□ -0.46
HOL1YNR055C TY2B-OR1Q12113 1770 aa12.16□□□□□ -0.46
HOL1YNR055C TY2B-DR1Q12472 1770 aa12.16□□□□□ -0.46
HOL1YNR055C TY2B-OR2Q12501 1770 aa12.16□□□□□ -0.46
HOL1YNR055C TY3B-GQ99315 1547 aa12.16□□□□□ -0.46
HOL1YNR055C LEU3P08638 886 aa12.13□□□□□ -0.47
HOL1YNR055C CAB3P36076 571 aa12.11□□□□□ -0.47
HOL1YNR055C VPS15P22219 1454 aa12.11□□□□□ -0.47
HOL1YNR055C YPR148CQ06523 435 aa12.1□□□□□ -0.47
HOL1YNR055C TY2B-BQ12491 1770 aa12.08□□□□□ -0.47
HOL1YNR055C EBP2P36049 427 aaKnown RBP12.07□□□□□ -0.48
HOL1YNR055C MDS3P53094 1487 aa12.06□□□□□ -0.48
HOL1YNR055C SRB8P25648 1427 aa12.04□□□□□ -0.48
HOL1YNR055C PSD2P53037 1138 aaKnown RBP12.04□□□□□ -0.48
HOL1YNR055C DNF1P32660 1571 aa12.04□□□□□ -0.48
HOL1YNR055C ISW2Q08773 1120 aa12□□□□□ -0.49
HOL1YNR055C NUP159P40477 1460 aa12□□□□□ -0.49
HOL1YNR055C YLR419WQ06698 1435 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms