RNA–Protein interactions for RNA: YMR164C

MSS11, Transcript of Transcription factor, yeastyeast

Gene MSS11, Length 2,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS11YMR164C MTC1P47018 478 aaKnown RBP8.33□□□□□ -1.08
MSS11YMR164C DRS1P32892 752 aaKnown RBP8.17□□□□□ -1.1
MSS11YMR164C DIP2Q12220 943 aaPredicted RBP7.02□□□□□ -1.29
MSS11YMR164C AVT3P36062 692 aa6.98□□□□□ -1.29
MSS11YMR164C BFR2Q06631 534 aaKnown RBP6.96□□□□□ -1.3
MSS11YMR164C FAP1P53971 965 aa6.87□□□□□ -1.31
MSS11YMR164C PRI1P10363 409 aa6.79□□□□□ -1.32
MSS11YMR164C ISW2Q08773 1120 aa6.71□□□□□ -1.34
MSS11YMR164C RPG1P38249 964 aaKnown RBP6.67□□□□□ -1.34
MSS11YMR164C AAD16Q02895 342 aa6.6□□□□□ -1.35
MSS11YMR164C RSE1Q04693 1361 aaKnown RBP6.6□□□□□ -1.35
MSS11YMR164C TFA1P36100 482 aa6.54□□□□□ -1.36
MSS11YMR164C PRY3P47033 881 aa6.46□□□□□ -1.37
MSS11YMR164C TSR3Q12094 313 aaKnown RBP6.39□□□□□ -1.39
MSS11YMR164C RPL17AP05740 184 aaKnown RBP6.37□□□□□ -1.39
MSS11YMR164C RPL17BP46990 184 aaKnown RBP6.37□□□□□ -1.39
MSS11YMR164C YCK3P39962 524 aa6.37□□□□□ -1.39
MSS11YMR164C SPT21P35209 758 aa6.29□□□□□ -1.4
MSS11YMR164C REB1P21538 810 aa6.26□□□□□ -1.41
MSS11YMR164C RIM101P33400 625 aa6.11□□□□□ -1.43
MSS11YMR164C YKR023WP36119 530 aaKnown RBP6.1□□□□□ -1.43
MSS11YMR164C HAA1Q12753 694 aaKnown RBP6.08□□□□□ -1.44
MSS11YMR164C MRPL32P25348 183 aa6.04□□□□□ -1.44
MSS11YMR164C CDC27P38042 758 aa6□□□□□ -1.45
MSS11YMR164C OXP1P28273 1286 aa5.95□□□□□ -1.46
MSS11YMR164C TFC8Q12308 588 aa5.94□□□□□ -1.46
MSS11YMR164C DCD1P06773 312 aa5.92□□□□□ -1.46
MSS11YMR164C HOP09932 586 aa5.91□□□□□ -1.46
MSS11YMR164C BCH2P36122 765 aa5.77□□□□□ -1.49
MSS11YMR164C YLR271WQ06152 274 aa5.76□□□□□ -1.49
MSS11YMR164C BUD31P25337 157 aaPredicted RBP5.73□□□□□ -1.49
MSS11YMR164C PTP3P40048 928 aa5.73□□□□□ -1.49
MSS11YMR164C MAP2P38174 421 aaKnown RBP5.71□□□□□ -1.5
MSS11YMR164C SSP1P38871 571 aa5.71□□□□□ -1.5
MSS11YMR164C YAH1Q12184 172 aaKnown RBP5.71□□□□□ -1.5
MSS11YMR164C YGL015CP33199 130 aa5.7□□□□□ -1.5
MSS11YMR164C UBP10P53874 792 aaPredicted RBP5.69□□□□□ -1.5
MSS11YMR164C YIL055CP40523 627 aaKnown RBP5.68□□□□□ -1.5
MSS11YMR164C RSM7P47150 247 aa5.67□□□□□ -1.5
MSS11YMR164C SCY1P53009 804 aa5.64□□□□□ -1.51
MSS11YMR164C PSD2P53037 1138 aaKnown RBP5.64□□□□□ -1.51
MSS11YMR164C EPS1P40557 701 aa5.62□□□□□ -1.51
MSS11YMR164C BDF1P35817 686 aa5.62□□□□□ -1.51
MSS11YMR164C AI2P03876 854 aa5.61□□□□□ -1.51
MSS11YMR164C CST9Q06032 482 aa5.59□□□□□ -1.51
MSS11YMR164C MGA2P40578 1113 aa5.54□□□□□ -1.52
MSS11YMR164C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
MSS11YMR164C SLX5P32828 619 aaKnown RBP5.5□□□□□ -1.53
MSS11YMR164C BBC1P47068 1157 aa5.5□□□□□ -1.53
MSS11YMR164C RCR1P38212 213 aa5.45□□□□□ -1.54
MSS11YMR164C MRM1P25270 412 aa5.43□□□□□ -1.54
MSS11YMR164C TGL3P40308 642 aa5.4□□□□□ -1.54
MSS11YMR164C NSR1P27476 414 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
MSS11YMR164C TIF4632P39936 914 aaKnown RBP5.37□□□□□ -1.55
MSS11YMR164C SIS1P25294 352 aaKnown RBP5.36□□□□□ -1.55
MSS11YMR164C VPS29P38759 282 aa5.36□□□□□ -1.55
MSS11YMR164C RAM2P29703 316 aa5.35□□□□□ -1.55
MSS11YMR164C MST1P07236 462 aa5.32□□□□□ -1.56
MSS11YMR164C RTG3P38165 486 aa5.32□□□□□ -1.56
MSS11YMR164C STS1P38637 319 aa5.31□□□□□ -1.56
MSS11YMR164C DMA1P38823 416 aa5.3□□□□□ -1.56
MSS11YMR164C YAP5P40574 245 aa5.25□□□□□ -1.57
MSS11YMR164C YMR1P47147 688 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
MSS11YMR164C MAK11P20484 414 aaKnown RBP5.24□□□□□ -1.57
MSS11YMR164C YOR238WQ08634 303 aa5.24□□□□□ -1.57
MSS11YMR164C DBP1P24784 617 aaKnown RBP5.23□□□□□ -1.57
MSS11YMR164C YFR006WP43590 535 aa5.22□□□□□ -1.57
MSS11YMR164C PIB1Q06651 286 aa5.21□□□□□ -1.58
MSS11YMR164C EDS1P38073 919 aa5.18□□□□□ -1.58
MSS11YMR164C VMA1P17255 1071 aaKnown RBP5.17□□□□□ -1.58
MSS11YMR164C COQ8P27697 501 aa5.16□□□□□ -1.58
MSS11YMR164C SAS10Q12136 610 aaPredicted RBP5.16□□□□□ -1.58
MSS11YMR164C SET1P38827 1080 aaKnown RBP5.14□□□□□ -1.59
MSS11YMR164C SAM3Q08986 587 aa5.12□□□□□ -1.59
MSS11YMR164C RQC2Q12532 1038 aaKnown RBP5.12□□□□□ -1.59
MSS11YMR164C YBL029C-AQ3E756 94 aa5.11□□□□□ -1.59
MSS11YMR164C YPR148CQ06523 435 aa5.11□□□□□ -1.59
MSS11YMR164C PTC3P34221 468 aaKnown RBP5.09□□□□□ -1.59
MSS11YMR164C MIF2P35201 549 aa5.09□□□□□ -1.59
MSS11YMR164C VNX1P42839 908 aa5.07□□□□□ -1.6
MSS11YMR164C NST1P53935 1240 aa5.07□□□□□ -1.6
MSS11YMR164C YOL036WQ08206 761 aa5.07□□□□□ -1.6
MSS11YMR164C NOP53Q12080 455 aaKnown RBP5.07□□□□□ -1.6
MSS11YMR164C SOL3P38858 249 aa5.04□□□□□ -1.6
MSS11YMR164C SET4P42948 560 aa5.03□□□□□ -1.6
MSS11YMR164C WSC3Q12215 556 aa5.02□□□□□ -1.61
MSS11YMR164C GTT3P39996 337 aa5.02□□□□□ -1.61
MSS11YMR164C MSB4Q12317 492 aa5.02□□□□□ -1.61
MSS11YMR164C IOC2Q12072 812 aa5□□□□□ -1.61
MSS11YMR164C GUT1P32190 709 aa5□□□□□ -1.61
MSS11YMR164C GRE2Q12068 342 aaKnown RBP5□□□□□ -1.61
MSS11YMR164C GYP5Q12344 894 aa4.99□□□□□ -1.61
MSS11YMR164C UBP9P39967 754 aa4.99□□□□□ -1.61
MSS11YMR164C TRP5P00931 707 aaKnown RBP4.97□□□□□ -1.61
MSS11YMR164C TIF11P38912 153 aaKnown RBP4.97□□□□□ -1.61
MSS11YMR164C IFH1P39520 1085 aa4.97□□□□□ -1.61
MSS11YMR164C ILV3P39522 585 aaKnown RBP4.97□□□□□ -1.61
MSS11YMR164C VPS70P47161 811 aa4.97□□□□□ -1.61
MSS11YMR164C DAN4P47179 1161 aa4.97□□□□□ -1.61
MSS11YMR164C UBP14P38237 781 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms