RNA–Protein interactions for RNA: YLR466W

YRF1-4, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-4, Length 4,149 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-4YLR466W SGS1P35187 1447 aa9.78□□□□□ -0.84
YRF1-4YLR466W INO80P53115 1489 aa9.62□□□□□ -0.87
YRF1-4YLR466W TCB3Q03640 1545 aaKnown RBP9.49□□□□□ -0.89
YRF1-4YLR466W SPA2P23201 1466 aaKnown RBP9.36□□□□□ -0.91
YRF1-4YLR466W SSN2P38931 1420 aa9.32□□□□□ -0.92
YRF1-4YLR466W MON2P48563 1636 aaPredicted RBP9.29□□□□□ -0.92
YRF1-4YLR466W DRS1P32892 752 aaKnown RBP9.25□□□□□ -0.93
YRF1-4YLR466W TY1B-DR4Q07793 1604 aa9.16□□□□□ -0.94
YRF1-4YLR466W SPT6P23615 1451 aaKnown RBP9.14□□□□□ -0.95
YRF1-4YLR466W SWR1Q05471 1514 aa9.11□□□□□ -0.95
YRF1-4YLR466W HSL1P34244 1518 aa9.09□□□□□ -0.95
YRF1-4YLR466W KOG1P38873 1557 aa9.01□□□□□ -0.97
YRF1-4YLR466W DNA2P38859 1522 aa8.99□□□□□ -0.97
YRF1-4YLR466W XRN1P22147 1528 aaKnown RBP8.94□□□□□ -0.98
YRF1-4YLR466W HIR3P47171 1648 aa8.92□□□□□ -0.98
YRF1-4YLR466W TAF2P23255 1407 aa8.81□□□□□ -1
YRF1-4YLR466W ECM5Q03214 1411 aa8.81□□□□□ -1
YRF1-4YLR466W BUD4P47136 1447 aa8.81□□□□□ -1
YRF1-4YLR466W REV3P14284 1504 aa8.8□□□□□ -1
YRF1-4YLR466W MTC1P47018 478 aaKnown RBP8.77□□□□□ -1.01
YRF1-4YLR466W RSE1Q04693 1361 aaKnown RBP8.75□□□□□ -1.01
YRF1-4YLR466W SKI3P17883 1432 aaKnown RBP8.74□□□□□ -1.01
YRF1-4YLR466W THO2P53552 1597 aaKnown RBP8.73□□□□□ -1.01
YRF1-4YLR466W SIN3P22579 1536 aa8.69□□□□□ -1.02
YRF1-4YLR466W RQC2Q12532 1038 aaKnown RBP8.65□□□□□ -1.02
YRF1-4YLR466W SSK2P53599 1579 aa8.64□□□□□ -1.03
YRF1-4YLR466W MYO2P19524 1574 aaKnown RBP8.63□□□□□ -1.03
YRF1-4YLR466W MDS3P53094 1487 aa8.57□□□□□ -1.04
YRF1-4YLR466W ESP1Q03018 1630 aa8.55□□□□□ -1.04
YRF1-4YLR466W TAF7Q05021 590 aa8.49□□□□□ -1.05
YRF1-4YLR466W YTA7P40340 1379 aa8.49□□□□□ -1.05
YRF1-4YLR466W ATG2P53855 1592 aa8.48□□□□□ -1.05
YRF1-4YLR466W YPK9Q12697 1472 aa8.48□□□□□ -1.05
YRF1-4YLR466W SAS10Q12136 610 aaPredicted RBP8.48□□□□□ -1.05
YRF1-4YLR466W STU1P38198 1513 aa8.47□□□□□ -1.05
YRF1-4YLR466W POL1P13382 1468 aa8.46□□□□□ -1.06
YRF1-4YLR466W UFD4P33202 1483 aa8.42□□□□□ -1.06
YRF1-4YLR466W MMS22Q06164 1454 aa8.42□□□□□ -1.06
YRF1-4YLR466W CHD1P32657 1468 aa8.39□□□□□ -1.07
YRF1-4YLR466W SCC2Q04002 1493 aa8.39□□□□□ -1.07
YRF1-4YLR466W RKR1Q04781 1562 aa8.38□□□□□ -1.07
YRF1-4YLR466W PEP1P32319 1579 aa8.38□□□□□ -1.07
YRF1-4YLR466W BPT1P14772 1559 aa8.37□□□□□ -1.07
YRF1-4YLR466W RPO31P04051 1460 aa8.35□□□□□ -1.07
YRF1-4YLR466W YOR1P53049 1477 aa8.34□□□□□ -1.07
YRF1-4YLR466W TOP2P06786 1428 aaKnown RBP8.34□□□□□ -1.07
YRF1-4YLR466W RTT106P40161 455 aa8.33□□□□□ -1.08
YRF1-4YLR466W SMC4Q12267 1418 aa8.32□□□□□ -1.08
YRF1-4YLR466W MYO4P32492 1471 aa8.32□□□□□ -1.08
YRF1-4YLR466W STH1P32597 1359 aa8.29□□□□□ -1.08
YRF1-4YLR466W IFH1P39520 1085 aa8.27□□□□□ -1.08
YRF1-4YLR466W YCF1P39109 1515 aaKnown RBP8.26□□□□□ -1.09
YRF1-4YLR466W TRM732Q03496 1420 aa8.24□□□□□ -1.09
YRF1-4YLR466W SPP41P38904 1435 aa8.2□□□□□ -1.1
YRF1-4YLR466W SNQ2P32568 1501 aaKnown RBP8.18□□□□□ -1.1
YRF1-4YLR466W PAN1P32521 1480 aa8.16□□□□□ -1.1
YRF1-4YLR466W TSC11P40061 1430 aa8.13□□□□□ -1.11
YRF1-4YLR466W IKI3Q06706 1349 aaKnown RBP8.12□□□□□ -1.11
YRF1-4YLR466W MET10P39692 1035 aa8.1□□□□□ -1.11
YRF1-4YLR466W TY2B-LR1P0C2J3 1770 aa8.1□□□□□ -1.11
YRF1-4YLR466W TY2B-FP0CX63 1770 aa8.1□□□□□ -1.11
YRF1-4YLR466W TY2B-GR2P0CX64 1770 aa8.1□□□□□ -1.11
YRF1-4YLR466W TY2B-CP25384 1770 aa8.1□□□□□ -1.11
YRF1-4YLR466W TY2B-DR2Q03494 1770 aa8.1□□□□□ -1.11
YRF1-4YLR466W TY1B-DR1Q03855 1755 aa8.1□□□□□ -1.11
YRF1-4YLR466W TY2B-DR3Q07791 1770 aaKnown RBP8.1□□□□□ -1.11
YRF1-4YLR466W TY2B-OR1Q12113 1770 aa8.1□□□□□ -1.11
YRF1-4YLR466W TY2B-DR1Q12472 1770 aa8.1□□□□□ -1.11
YRF1-4YLR466W TY2B-OR2Q12501 1770 aa8.1□□□□□ -1.11
YRF1-4YLR466W CDC25P04821 1589 aa8.1□□□□□ -1.11
YRF1-4YLR466W GEA1P47102 1408 aaPredicted RBP8.09□□□□□ -1.11
YRF1-4YLR466W VTH1P40438 1549 aa8.09□□□□□ -1.12
YRF1-4YLR466W VTH2P40890 1549 aa8.09□□□□□ -1.12
YRF1-4YLR466W PDR15Q04182 1529 aaKnown RBP8.08□□□□□ -1.12
YRF1-4YLR466W MLP2P40457 1679 aa8.06□□□□□ -1.12
YRF1-4YLR466W TY1B-DR3Q99231 1755 aa8.06□□□□□ -1.12
YRF1-4YLR466W CKB1P43639 278 aa8.04□□□□□ -1.12
YRF1-4YLR466W MET5P47169 1442 aa8.04□□□□□ -1.12
YRF1-4YLR466W TY2B-BQ12491 1770 aa8.04□□□□□ -1.12
YRF1-4YLR466W NUP159P40477 1460 aa8.01□□□□□ -1.13
YRF1-4YLR466W ESC1Q03661 1658 aaKnown RBP7.99□□□□□ -1.13
YRF1-4YLR466W GEA2P39993 1459 aaKnown RBP7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-HO13535 1793 aa7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-DR5P0C2I2 1755 aa7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-DR6P0C2I3 1755 aa7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-LR2P0C2I5 1755 aa7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-LR3P0C2I6 1755 aaKnown RBP7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-PR1P0C2I9 1755 aaKnown RBP7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-PR2P0C2J0 1756 aa7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-PR3P0C2J1 1755 aaKnown RBP7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-JR1P47098 1755 aa7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-ML2Q03434 1755 aaKnown RBP7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-ER1Q03612 1755 aa7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-ML1Q04711 1755 aaKnown RBP7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-BRQ12193 1756 aa7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-GR2Q12269 1755 aa7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-OLQ12273 1755 aa7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-GR3Q12316 1755 aa7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-PLQ12414 1755 aaKnown RBP7.98□□□□□ -1.13
YRF1-4YLR466W TY1B-ORQ92393 1755 aa7.98□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms