RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C MTC1P47018 478 aaKnown RBP15.52■□□□□ 0.08
BLS1YLR408C DRS1P32892 752 aaKnown RBP15.48■□□□□ 0.07
BLS1YLR408C BFR2Q06631 534 aaKnown RBP13.36□□□□□ -0.27
BLS1YLR408C DIP2Q12220 943 aaPredicted RBP13.23□□□□□ -0.29
BLS1YLR408C AVT3P36062 692 aa13.09□□□□□ -0.31
BLS1YLR408C FAP1P53971 965 aa12.68□□□□□ -0.38
BLS1YLR408C TFA1P36100 482 aa12.62□□□□□ -0.39
BLS1YLR408C ISW2Q08773 1120 aa12.61□□□□□ -0.39
BLS1YLR408C PRI1P10363 409 aa12.51□□□□□ -0.41
BLS1YLR408C RSE1Q04693 1361 aaKnown RBP12.49□□□□□ -0.41
BLS1YLR408C RPG1P38249 964 aaKnown RBP12.44□□□□□ -0.42
BLS1YLR408C AAD16Q02895 342 aa12.29□□□□□ -0.44
BLS1YLR408C RPL17AP05740 184 aaKnown RBP12□□□□□ -0.49
BLS1YLR408C RPL17BP46990 184 aaKnown RBP12□□□□□ -0.49
BLS1YLR408C PRY3P47033 881 aa11.89□□□□□ -0.51
BLS1YLR408C REB1P21538 810 aa11.84□□□□□ -0.51
BLS1YLR408C TSR3Q12094 313 aaKnown RBP11.83□□□□□ -0.52
BLS1YLR408C SPT21P35209 758 aa11.64□□□□□ -0.55
BLS1YLR408C RIM101P33400 625 aa11.48□□□□□ -0.57
BLS1YLR408C MRPL32P25348 183 aa11.38□□□□□ -0.59
BLS1YLR408C YCK3P39962 524 aa11.37□□□□□ -0.59
BLS1YLR408C HAA1Q12753 694 aaKnown RBP11.3□□□□□ -0.6
BLS1YLR408C YKR023WP36119 530 aaKnown RBP11.26□□□□□ -0.61
BLS1YLR408C OXP1P28273 1286 aa11.1□□□□□ -0.63
BLS1YLR408C TFC8Q12308 588 aa11.03□□□□□ -0.64
BLS1YLR408C CDC27P38042 758 aa11.01□□□□□ -0.65
BLS1YLR408C HOP09932 586 aa10.97□□□□□ -0.65
BLS1YLR408C PTP3P40048 928 aa10.92□□□□□ -0.66
BLS1YLR408C SSP1P38871 571 aa10.9□□□□□ -0.66
BLS1YLR408C YIL055CP40523 627 aaKnown RBP10.88□□□□□ -0.67
BLS1YLR408C DCD1P06773 312 aa10.86□□□□□ -0.67
BLS1YLR408C YAH1Q12184 172 aaKnown RBP10.83□□□□□ -0.68
BLS1YLR408C YLR271WQ06152 274 aa10.78□□□□□ -0.68
BLS1YLR408C RSM7P47150 247 aa10.76□□□□□ -0.69
BLS1YLR408C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.72□□□□□ -0.69not detected
BLS1YLR408C BCH2P36122 765 aa10.7□□□□□ -0.7
BLS1YLR408C YGL015CP33199 130 aa10.65□□□□□ -0.7
BLS1YLR408C UBP10P53874 792 aaPredicted RBP10.59□□□□□ -0.71
BLS1YLR408C RQC2Q12532 1038 aaKnown RBP10.58□□□□□ -0.72
BLS1YLR408C AI2P03876 854 aa10.56□□□□□ -0.72
BLS1YLR408C MAP2P38174 421 aaKnown RBP10.53□□□□□ -0.72
BLS1YLR408C MGA2P40578 1113 aa10.53□□□□□ -0.72
BLS1YLR408C PSD2P53037 1138 aaKnown RBP10.52□□□□□ -0.73
BLS1YLR408C SCY1P53009 804 aa10.5□□□□□ -0.73
BLS1YLR408C EPS1P40557 701 aa10.49□□□□□ -0.73
BLS1YLR408C BBC1P47068 1157 aa10.49□□□□□ -0.73
BLS1YLR408C BDF1P35817 686 aa10.43□□□□□ -0.74
BLS1YLR408C CST9Q06032 482 aa10.42□□□□□ -0.74
BLS1YLR408C SLX5P32828 619 aaKnown RBP10.32□□□□□ -0.76
BLS1YLR408C DMA1P38823 416 aa10.31□□□□□ -0.76
BLS1YLR408C MRM1P25270 412 aa10.21□□□□□ -0.77
BLS1YLR408C RTG3P38165 486 aa10.11□□□□□ -0.79
BLS1YLR408C TIF4632P39936 914 aaKnown RBP10.11□□□□□ -0.79
BLS1YLR408C TGL3P40308 642 aa10.11□□□□□ -0.79
BLS1YLR408C RAM2P29703 316 aa10.07□□□□□ -0.8
BLS1YLR408C RCR1P38212 213 aa10.07□□□□□ -0.8
BLS1YLR408C VPS29P38759 282 aa10.04□□□□□ -0.8
BLS1YLR408C NSR1P27476 414 aaKnown RBP RIP-Chip data10.01□□□□□ -0.81not detected
BLS1YLR408C YMR1P47147 688 aaKnown RBP RIP-Chip data9.94□□□□□ -0.82not detected
BLS1YLR408C MAK11P20484 414 aaKnown RBP9.92□□□□□ -0.82
BLS1YLR408C YAP5P40574 245 aa9.89□□□□□ -0.83
BLS1YLR408C SAS10Q12136 610 aaPredicted RBP9.89□□□□□ -0.83
BLS1YLR408C YOR238WQ08634 303 aa9.87□□□□□ -0.83
BLS1YLR408C STS1P38637 319 aa9.86□□□□□ -0.83
BLS1YLR408C MST1P07236 462 aa9.84□□□□□ -0.83
BLS1YLR408C DBP1P24784 617 aaKnown RBP9.84□□□□□ -0.83
BLS1YLR408C SET1P38827 1080 aaKnown RBP9.82□□□□□ -0.84
BLS1YLR408C YFR006WP43590 535 aa9.79□□□□□ -0.84
BLS1YLR408C NOP53Q12080 455 aaKnown RBP9.78□□□□□ -0.84
BLS1YLR408C COQ8P27697 501 aa9.77□□□□□ -0.85
BLS1YLR408C YPR148CQ06523 435 aa9.73□□□□□ -0.85
BLS1YLR408C EDS1P38073 919 aa9.71□□□□□ -0.86
BLS1YLR408C IFH1P39520 1085 aa9.71□□□□□ -0.86
BLS1YLR408C PIB1Q06651 286 aa9.71□□□□□ -0.86
BLS1YLR408C BUD31P25337 157 aaPredicted RBP9.7□□□□□ -0.86
BLS1YLR408C MIF2P35201 549 aa9.69□□□□□ -0.86
BLS1YLR408C VMA1P17255 1071 aaKnown RBP9.68□□□□□ -0.86
BLS1YLR408C SAM3Q08986 587 aa9.64□□□□□ -0.87
BLS1YLR408C PTC3P34221 468 aaKnown RBP9.63□□□□□ -0.87
BLS1YLR408C VPS70P47161 811 aa9.6□□□□□ -0.87
BLS1YLR408C CKB1P43639 278 aa9.59□□□□□ -0.87
BLS1YLR408C GTT3P39996 337 aa9.57□□□□□ -0.88
BLS1YLR408C LEU3P08638 886 aa9.51□□□□□ -0.89
BLS1YLR408C GRE2Q12068 342 aaKnown RBP9.51□□□□□ -0.89
BLS1YLR408C GUT1P32190 709 aa9.5□□□□□ -0.89
BLS1YLR408C GYP5Q12344 894 aa9.5□□□□□ -0.89
BLS1YLR408C ATH1P48016 1211 aa9.48□□□□□ -0.89
BLS1YLR408C YOL036WQ08206 761 aa9.48□□□□□ -0.89
BLS1YLR408C MSB4Q12317 492 aa9.47□□□□□ -0.89
BLS1YLR408C ABP1P15891 592 aaKnown RBP9.46□□□□□ -0.9
BLS1YLR408C UBP9P39967 754 aa9.44□□□□□ -0.9
BLS1YLR408C REF2P42073 533 aaPredicted RBP9.44□□□□□ -0.9
BLS1YLR408C SET4P42948 560 aa9.43□□□□□ -0.9
BLS1YLR408C WSC3Q12215 556 aa9.42□□□□□ -0.9
BLS1YLR408C SPB4P25808 606 aaPredicted RBP9.41□□□□□ -0.9
BLS1YLR408C VNX1P42839 908 aa9.41□□□□□ -0.9
BLS1YLR408C YBL029C-AQ3E756 94 aa9.41□□□□□ -0.9
BLS1YLR408C DSF2P38213 736 aa9.4□□□□□ -0.9
BLS1YLR408C PBS2P08018 668 aa9.39□□□□□ -0.91
BLS1YLR408C SOL3P38858 249 aa9.39□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms