RNA–Protein interactions for RNA: YLR182W

SWI6, Transcript of Transcription cofactor, yeast

Gene SWI6, Length 2,412 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI6	YLR182W	MTC1	P47018	478 aa	Known RBP	6.72	□□□□□ -1.33
SWI6	YLR182W	DRS1	P32892	752 aa	Known RBP	6.64	□□□□□ -1.35
SWI6	YLR182W	FAP1	P53971	965 aa		6.25	□□□□□ -1.41
SWI6	YLR182W	PRY3	P47033	881 aa		5.79	□□□□□ -1.48
SWI6	YLR182W	DIP2	Q12220	943 aa	Predicted RBP	5.7	□□□□□ -1.5
SWI6	YLR182W	BFR2	Q06631	534 aa	Known RBP	5.67	□□□□□ -1.5
SWI6	YLR182W	AVT3	P36062	692 aa		5.66	□□□□□ -1.5
SWI6	YLR182W	PRI1	P10363	409 aa		5.47	□□□□□ -1.53
SWI6	YLR182W	HAA1	Q12753	694 aa	Known RBP	5.46	□□□□□ -1.54
SWI6	YLR182W	RPG1	P38249	964 aa	Known RBP	5.42	□□□□□ -1.54
SWI6	YLR182W	ISW2	Q08773	1120 aa		5.4	□□□□□ -1.54
SWI6	YLR182W	AAD16	Q02895	342 aa		5.38	□□□□□ -1.55
SWI6	YLR182W	RSE1	Q04693	1361 aa	Known RBP	5.34	□□□□□ -1.55
SWI6	YLR182W	TFA1	P36100	482 aa		5.32	□□□□□ -1.56
SWI6	YLR182W	TSR3	Q12094	313 aa	Known RBP	5.19	□□□□□ -1.58
SWI6	YLR182W	RPL17A	P05740	184 aa	Known RBP	5.18	□□□□□ -1.58
SWI6	YLR182W	RPL17B	P46990	184 aa	Known RBP	5.18	□□□□□ -1.58
SWI6	YLR182W	YCK3	P39962	524 aa		5.15	□□□□□ -1.59
SWI6	YLR182W	REB1	P21538	810 aa		5.07	□□□□□ -1.6
SWI6	YLR182W	SPT21	P35209	758 aa		5.07	□□□□□ -1.6
SWI6	YLR182W	MRPL32	P25348	183 aa		4.96	□□□□□ -1.61
SWI6	YLR182W	RIM101	P33400	625 aa		4.95	□□□□□ -1.62
SWI6	YLR182W	YKR023W	P36119	530 aa	Known RBP	4.94	□□□□□ -1.62
SWI6	YLR182W	YGL015C	P33199	130 aa		4.92	□□□□□ -1.62
SWI6	YLR182W	CDC27	P38042	758 aa		4.85	□□□□□ -1.63
SWI6	YLR182W	OXP1	P28273	1286 aa		4.84	□□□□□ -1.63
SWI6	YLR182W	DCD1	P06773	312 aa		4.83	□□□□□ -1.64
SWI6	YLR182W	HO	P09932	586 aa		4.81	□□□□□ -1.64
SWI6	YLR182W	TFC8	Q12308	588 aa		4.8	□□□□□ -1.64
SWI6	YLR182W	PTP3	P40048	928 aa		4.7	□□□□□ -1.66
SWI6	YLR182W	SIS1	P25294	352 aa	Known RBP	4.68	□□□□□ -1.66
SWI6	YLR182W	BCH2	P36122	765 aa		4.68	□□□□□ -1.66
SWI6	YLR182W	YLR271W	Q06152	274 aa		4.68	□□□□□ -1.66
SWI6	YLR182W	YAH1	Q12184	172 aa	Known RBP	4.67	□□□□□ -1.66
SWI6	YLR182W	SSP1	P38871	571 aa		4.64	□□□□□ -1.67
SWI6	YLR182W	BUD31	P25337	157 aa	Predicted RBP	4.64	□□□□□ -1.67
SWI6	YLR182W	UBP9	P39967	754 aa		4.63	□□□□□ -1.67
SWI6	YLR182W	MAP2	P38174	421 aa	Known RBP	4.62	□□□□□ -1.67
SWI6	YLR182W	YIL055C	P40523	627 aa	Known RBP	4.62	□□□□□ -1.67
SWI6	YLR182W	RSM7	P47150	247 aa		4.6	□□□□□ -1.67
SWI6	YLR182W	SCY1	P53009	804 aa		4.57	□□□□□ -1.68
SWI6	YLR182W	AI2	P03876	854 aa		4.55	□□□□□ -1.68
SWI6	YLR182W	EPS1	P40557	701 aa		4.55	□□□□□ -1.68
SWI6	YLR182W	CST9	Q06032	482 aa		4.55	□□□□□ -1.68
SWI6	YLR182W	BDF1	P35817	686 aa		4.55	□□□□□ -1.68
SWI6	YLR182W	PSD2	P53037	1138 aa	Known RBP	4.55	□□□□□ -1.68
SWI6	YLR182W	UBP10	P53874	792 aa	Predicted RBP	4.54	□□□□□ -1.68
SWI6	YLR182W	MGA2	P40578	1113 aa		4.48	□□□□□ -1.69
SWI6	YLR182W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.48	□□□□□ -1.69	not detected
SWI6	YLR182W	TIF4632	P39936	914 aa	Known RBP	4.45	□□□□□ -1.7
SWI6	YLR182W	BBC1	P47068	1157 aa		4.44	□□□□□ -1.7
SWI6	YLR182W	SLX5	P32828	619 aa	Known RBP	4.44	□□□□□ -1.7
SWI6	YLR182W	RCR1	P38212	213 aa		4.44	□□□□□ -1.7
SWI6	YLR182W	MRM1	P25270	412 aa		4.42	□□□□□ -1.7
SWI6	YLR182W	DMA1	P38823	416 aa		4.37	□□□□□ -1.71
SWI6	YLR182W	RAM2	P29703	316 aa		4.35	□□□□□ -1.71
SWI6	YLR182W	VPS29	P38759	282 aa		4.35	□□□□□ -1.71
SWI6	YLR182W	TGL3	P40308	642 aa		4.33	□□□□□ -1.72
SWI6	YLR182W	RTG3	P38165	486 aa		4.31	□□□□□ -1.72
SWI6	YLR182W	STS1	P38637	319 aa		4.3	□□□□□ -1.72
SWI6	YLR182W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
SWI6	YLR182W	YFR006W	P43590	535 aa		4.26	□□□□□ -1.73
SWI6	YLR182W	PIB1	Q06651	286 aa		4.26	□□□□□ -1.73
SWI6	YLR182W	MST1	P07236	462 aa		4.25	□□□□□ -1.73
SWI6	YLR182W	DBP1	P24784	617 aa	Known RBP	4.24	□□□□□ -1.73
SWI6	YLR182W	YJL171C	P46992	396 aa		4.24	□□□□□ -1.73
SWI6	YLR182W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
SWI6	YLR182W	YOR238W	Q08634	303 aa		4.23	□□□□□ -1.73
SWI6	YLR182W	MAK11	P20484	414 aa	Known RBP	4.22	□□□□□ -1.73
SWI6	YLR182W	YAP5	P40574	245 aa		4.22	□□□□□ -1.73
SWI6	YLR182W	EDS1	P38073	919 aa		4.21	□□□□□ -1.74
SWI6	YLR182W	COQ8	P27697	501 aa		4.18	□□□□□ -1.74
SWI6	YLR182W	SET1	P38827	1080 aa	Known RBP	4.17	□□□□□ -1.74
SWI6	YLR182W	SAS10	Q12136	610 aa	Predicted RBP	4.17	□□□□□ -1.74
SWI6	YLR182W	VMA1	P17255	1071 aa	Known RBP	4.17	□□□□□ -1.74
SWI6	YLR182W	RQC2	Q12532	1038 aa	Known RBP	4.16	□□□□□ -1.74
SWI6	YLR182W	MIF2	P35201	549 aa		4.14	□□□□□ -1.75
SWI6	YLR182W	YBL029C-A	Q3E756	94 aa		4.13	□□□□□ -1.75
SWI6	YLR182W	PTC3	P34221	468 aa	Known RBP	4.13	□□□□□ -1.75
SWI6	YLR182W	YPR148C	Q06523	435 aa		4.11	□□□□□ -1.75
SWI6	YLR182W	SAM3	Q08986	587 aa		4.11	□□□□□ -1.75
SWI6	YLR182W	SOL3	P38858	249 aa		4.1	□□□□□ -1.75
SWI6	YLR182W	NST1	P53935	1240 aa		4.09	□□□□□ -1.75
SWI6	YLR182W	VNX1	P42839	908 aa		4.09	□□□□□ -1.76
SWI6	YLR182W	YOL036W	Q08206	761 aa		4.09	□□□□□ -1.76
SWI6	YLR182W	SET4	P42948	560 aa		4.08	□□□□□ -1.76
SWI6	YLR182W	WSC3	Q12215	556 aa		4.08	□□□□□ -1.76
SWI6	YLR182W	VPS70	P47161	811 aa		4.06	□□□□□ -1.76
SWI6	YLR182W	NOP53	Q12080	455 aa	Known RBP	4.05	□□□□□ -1.76
SWI6	YLR182W	GTT3	P39996	337 aa		4.04	□□□□□ -1.76
SWI6	YLR182W	GYP5	Q12344	894 aa		4.04	□□□□□ -1.76
SWI6	YLR182W	GRE2	Q12068	342 aa	Known RBP	4.03	□□□□□ -1.76
SWI6	YLR182W	IOC2	Q12072	812 aa		4.03	□□□□□ -1.76
SWI6	YLR182W	GUT1	P32190	709 aa		4.03	□□□□□ -1.76
SWI6	YLR182W	UBP14	P38237	781 aa	Known RBP	4.03	□□□□□ -1.76
SWI6	YLR182W	DCW1	P36091	449 aa		4.02	□□□□□ -1.77
SWI6	YLR182W	ILV3	P39522	585 aa	Known RBP	4.02	□□□□□ -1.77
SWI6	YLR182W	TRP5	P00931	707 aa	Known RBP	4.01	□□□□□ -1.77
SWI6	YLR182W	ATH1	P48016	1211 aa		4.01	□□□□□ -1.77
SWI6	YLR182W	YDR090C	Q03193	310 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms