RNA–Protein interactions for RNA: YKL223W

YKL223W, Transcript of Dubious open reading frame, yeastyeast

Gene YKL223W, Length 333 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKL223WYKL223W MTC1P47018 478 aaKnown RBP9.6□□□□□ -0.87
YKL223WYKL223W DRS1P32892 752 aaKnown RBP9.3□□□□□ -0.92
YKL223WYKL223W FAP1P53971 965 aa8.8□□□□□ -1
YKL223WYKL223W SPA2P23201 1466 aaKnown RBP8.57□□□□□ -1.04
YKL223WYKL223W SGS1P35187 1447 aa8.41□□□□□ -1.06
YKL223WYKL223W SSN2P38931 1420 aa8.37□□□□□ -1.07
YKL223WYKL223W SKI3P17883 1432 aaKnown RBP8.29□□□□□ -1.08
YKL223WYKL223W PRY3P47033 881 aa8.29□□□□□ -1.08
YKL223WYKL223W BFR2Q06631 534 aaKnown RBP8.26□□□□□ -1.09
YKL223WYKL223W NOP2P40991 618 aaKnown RBP8.2□□□□□ -1.1
YKL223WYKL223W INO80P53115 1489 aa8.09□□□□□ -1.11
YKL223WYKL223W NSR1P27476 414 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
YKL223WYKL223W DIP2Q12220 943 aaPredicted RBP8.03□□□□□ -1.12
YKL223WYKL223W CHD1P32657 1468 aa7.9□□□□□ -1.14
YKL223WYKL223W PRI1P10363 409 aa7.89□□□□□ -1.15
YKL223WYKL223W AAD16Q02895 342 aa7.88□□□□□ -1.15
YKL223WYKL223W AVT3P36062 692 aa7.85□□□□□ -1.15
YKL223WYKL223W ISW2Q08773 1120 aa7.83□□□□□ -1.16
YKL223WYKL223W MMS22Q06164 1454 aa7.82□□□□□ -1.16
YKL223WYKL223W RPG1P38249 964 aaKnown RBP7.78□□□□□ -1.16
YKL223WYKL223W YCK3P39962 524 aa7.76□□□□□ -1.17
YKL223WYKL223W XRN1P22147 1528 aaKnown RBP7.73□□□□□ -1.17
YKL223WYKL223W UFD4P33202 1483 aa7.72□□□□□ -1.17
YKL223WYKL223W TCB3Q03640 1545 aaKnown RBP7.72□□□□□ -1.17
YKL223WYKL223W HAA1Q12753 694 aaKnown RBP7.71□□□□□ -1.18
YKL223WYKL223W CAB3P36076 571 aa7.7□□□□□ -1.18
YKL223WYKL223W RQC2Q12532 1038 aaKnown RBP7.7□□□□□ -1.18
YKL223WYKL223W EBP2P36049 427 aaKnown RBP7.69□□□□□ -1.18
YKL223WYKL223W ENP1P38333 483 aaKnown RBP7.67□□□□□ -1.18
YKL223WYKL223W RSE1Q04693 1361 aaKnown RBP7.64□□□□□ -1.19
YKL223WYKL223W SPP41P38904 1435 aa7.61□□□□□ -1.19
YKL223WYKL223W TRM732Q03496 1420 aa7.57□□□□□ -1.2
YKL223WYKL223W STH1P32597 1359 aa7.56□□□□□ -1.2
YKL223WYKL223W IKI3Q06706 1349 aaKnown RBP7.55□□□□□ -1.2
YKL223WYKL223W TY1B-DR4Q07793 1604 aa7.55□□□□□ -1.2
YKL223WYKL223W HSL1P34244 1518 aa7.53□□□□□ -1.2
YKL223WYKL223W MON2P48563 1636 aaPredicted RBP7.53□□□□□ -1.2
YKL223WYKL223W YPR148CQ06523 435 aa7.51□□□□□ -1.21
YKL223WYKL223W TSR3Q12094 313 aaKnown RBP7.5□□□□□ -1.21
YKL223WYKL223W ECM5Q03214 1411 aa7.48□□□□□ -1.21
YKL223WYKL223W SPT6P23615 1451 aaKnown RBP7.48□□□□□ -1.21
YKL223WYKL223W NUP170P38181 1502 aa7.47□□□□□ -1.21
YKL223WYKL223W STU1P38198 1513 aa7.47□□□□□ -1.21
YKL223WYKL223W POL5P39985 1022 aaKnown RBP7.47□□□□□ -1.21
YKL223WYKL223W SEC3P33332 1336 aaKnown RBP7.47□□□□□ -1.21
YKL223WYKL223W SIN3P22579 1536 aa7.47□□□□□ -1.21
YKL223WYKL223W THO2P53552 1597 aaKnown RBP7.46□□□□□ -1.21
YKL223WYKL223W TFA1P36100 482 aa7.45□□□□□ -1.22
YKL223WYKL223W HIR3P47171 1648 aa7.44□□□□□ -1.22
YKL223WYKL223W YTA7P40340 1379 aa7.44□□□□□ -1.22
YKL223WYKL223W MYO2P19524 1574 aaKnown RBP7.43□□□□□ -1.22
YKL223WYKL223W REV3P14284 1504 aa7.42□□□□□ -1.22
YKL223WYKL223W SSK2P53599 1579 aa7.42□□□□□ -1.22
YKL223WYKL223W RPL17AP05740 184 aaKnown RBP7.42□□□□□ -1.22
YKL223WYKL223W RPL17BP46990 184 aaKnown RBP7.42□□□□□ -1.22
YKL223WYKL223W PRS1P32895 427 aaKnown RBP7.41□□□□□ -1.22
YKL223WYKL223W SPT7P35177 1332 aa7.41□□□□□ -1.22
YKL223WYKL223W POL1P13382 1468 aa7.4□□□□□ -1.22
YKL223WYKL223W SSM4P40318 1319 aa7.39□□□□□ -1.23
YKL223WYKL223W SAS10Q12136 610 aaPredicted RBP7.36□□□□□ -1.23
YKL223WYKL223W SIS2P36024 562 aa7.35□□□□□ -1.23
YKL223WYKL223W TAF2P23255 1407 aa7.34□□□□□ -1.23
YKL223WYKL223W PEP1P32319 1579 aa7.33□□□□□ -1.24
YKL223WYKL223W SCC2Q04002 1493 aa7.33□□□□□ -1.24
YKL223WYKL223W BPT1P14772 1559 aa7.32□□□□□ -1.24
YKL223WYKL223W TCB2P48231 1178 aa7.31□□□□□ -1.24
YKL223WYKL223W ESP1Q03018 1630 aa7.3□□□□□ -1.24
YKL223WYKL223W REB1P21538 810 aa7.3□□□□□ -1.24
YKL223WYKL223W MYO4P32492 1471 aa7.3□□□□□ -1.24
YKL223WYKL223W MLP2P40457 1679 aa7.29□□□□□ -1.24
YKL223WYKL223W PDR10P51533 1564 aa7.29□□□□□ -1.24
YKL223WYKL223W BUD4P47136 1447 aa7.28□□□□□ -1.24
YKL223WYKL223W IME2P32581 645 aa7.28□□□□□ -1.24
YKL223WYKL223W CLC1P17891 233 aa7.27□□□□□ -1.25
YKL223WYKL223W TAF7Q05021 590 aa7.27□□□□□ -1.25
YKL223WYKL223W SRB8P25648 1427 aa7.27□□□□□ -1.25
YKL223WYKL223W SMC4Q12267 1418 aa7.26□□□□□ -1.25
YKL223WYKL223W DNA2P38859 1522 aa7.25□□□□□ -1.25
YKL223WYKL223W YLR419WQ06698 1435 aaKnown RBP7.25□□□□□ -1.25
YKL223WYKL223W RTT106P40161 455 aa7.24□□□□□ -1.25
YKL223WYKL223W URN1Q06525 465 aaKnown RBP7.24□□□□□ -1.25
YKL223WYKL223W PAN1P32521 1480 aa7.23□□□□□ -1.25
YKL223WYKL223W YOR1P53049 1477 aa7.22□□□□□ -1.25
YKL223WYKL223W OPY1P38271 328 aa7.2□□□□□ -1.26
YKL223WYKL223W SNQ2P32568 1501 aaKnown RBP7.2□□□□□ -1.26
YKL223WYKL223W SWR1Q05471 1514 aa7.19□□□□□ -1.26
YKL223WYKL223W CFT1Q06632 1357 aaKnown RBP7.19□□□□□ -1.26
YKL223WYKL223W YPK9Q12697 1472 aa7.18□□□□□ -1.26
YKL223WYKL223W MNN4P36044 1178 aa7.18□□□□□ -1.26
YKL223WYKL223W TSC11P40061 1430 aa7.18□□□□□ -1.26
YKL223WYKL223W YCF1P39109 1515 aaKnown RBP7.17□□□□□ -1.26
YKL223WYKL223W RKR1Q04781 1562 aa7.16□□□□□ -1.26
YKL223WYKL223W MRPL32P25348 183 aa7.15□□□□□ -1.26
YKL223WYKL223W TOP2P06786 1428 aaKnown RBP7.15□□□□□ -1.27
YKL223WYKL223W GEA1P47102 1408 aaPredicted RBP7.15□□□□□ -1.27
YKL223WYKL223W IRC20Q06554 1556 aa7.13□□□□□ -1.27
YKL223WYKL223W SPT21P35209 758 aa7.13□□□□□ -1.27
YKL223WYKL223W RPC31P17890 251 aa7.12□□□□□ -1.27
YKL223WYKL223W YFR016CP43597 1233 aaKnown RBP7.12□□□□□ -1.27
YKL223WYKL223W EAF7P53911 425 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms