RNA–Protein interactions for RNA: YKL008C

LAC1, Transcript of Ceramide synthase component, yeastyeast

Gene LAC1, Length 1,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LAC1YKL008C DRS1P32892 752 aaKnown RBP14.97□□□□□ -0.01
LAC1YKL008C MTC1P47018 478 aaKnown RBP14.9□□□□□ -0.02
LAC1YKL008C BFR2Q06631 534 aaKnown RBP12.92□□□□□ -0.34
LAC1YKL008C DIP2Q12220 943 aaPredicted RBP12.75□□□□□ -0.37
LAC1YKL008C AVT3P36062 692 aa12.54□□□□□ -0.4
LAC1YKL008C FAP1P53971 965 aa12.32□□□□□ -0.44
LAC1YKL008C ISW2Q08773 1120 aa12.13□□□□□ -0.47
LAC1YKL008C TFA1P36100 482 aa12.09□□□□□ -0.47
LAC1YKL008C RSE1Q04693 1361 aaKnown RBP12.03□□□□□ -0.48
LAC1YKL008C RPG1P38249 964 aaKnown RBP12□□□□□ -0.49
LAC1YKL008C PRI1P10363 409 aa11.99□□□□□ -0.49
LAC1YKL008C AAD16Q02895 342 aa11.79□□□□□ -0.52
LAC1YKL008C RPL17AP05740 184 aaKnown RBP11.61□□□□□ -0.55
LAC1YKL008C RPL17BP46990 184 aaKnown RBP11.61□□□□□ -0.55
LAC1YKL008C PRY3P47033 881 aa11.54□□□□□ -0.56
LAC1YKL008C REB1P21538 810 aa11.46□□□□□ -0.57
LAC1YKL008C TSR3Q12094 313 aaKnown RBP11.44□□□□□ -0.58
LAC1YKL008C SPT21P35209 758 aa11.14□□□□□ -0.63
LAC1YKL008C RIM101P33400 625 aa10.97□□□□□ -0.65
LAC1YKL008C MRPL32P25348 183 aa10.96□□□□□ -0.65
LAC1YKL008C YCK3P39962 524 aa10.88□□□□□ -0.67
LAC1YKL008C HAA1Q12753 694 aaKnown RBP10.82□□□□□ -0.68
LAC1YKL008C YKR023WP36119 530 aaKnown RBP10.8□□□□□ -0.68
LAC1YKL008C OXP1P28273 1286 aa10.66□□□□□ -0.7
LAC1YKL008C PTP3P40048 928 aa10.64□□□□□ -0.71
LAC1YKL008C HOP09932 586 aa10.62□□□□□ -0.71
LAC1YKL008C CDC27P38042 758 aa10.6□□□□□ -0.71
LAC1YKL008C TFC8Q12308 588 aa10.58□□□□□ -0.72
LAC1YKL008C DCD1P06773 312 aa10.56□□□□□ -0.72
LAC1YKL008C YAH1Q12184 172 aaKnown RBP10.54□□□□□ -0.72
LAC1YKL008C YIL055CP40523 627 aaKnown RBP10.52□□□□□ -0.73
LAC1YKL008C SSP1P38871 571 aa10.48□□□□□ -0.73
LAC1YKL008C YLR271WQ06152 274 aa10.36□□□□□ -0.75
LAC1YKL008C RSM7P47150 247 aa10.34□□□□□ -0.75
LAC1YKL008C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.31□□□□□ -0.76not detected
LAC1YKL008C BCH2P36122 765 aa10.28□□□□□ -0.76
LAC1YKL008C YGL015CP33199 130 aa10.2□□□□□ -0.78
LAC1YKL008C AI2P03876 854 aa10.17□□□□□ -0.78
LAC1YKL008C RQC2Q12532 1038 aaKnown RBP10.16□□□□□ -0.78
LAC1YKL008C MAP2P38174 421 aaKnown RBP10.15□□□□□ -0.78
LAC1YKL008C SCY1P53009 804 aa10.14□□□□□ -0.79
LAC1YKL008C UBP10P53874 792 aaPredicted RBP10.11□□□□□ -0.79
LAC1YKL008C EPS1P40557 701 aa10.1□□□□□ -0.79
LAC1YKL008C MGA2P40578 1113 aa10.1□□□□□ -0.79
LAC1YKL008C BBC1P47068 1157 aa10.1□□□□□ -0.79
LAC1YKL008C PSD2P53037 1138 aaKnown RBP10.06□□□□□ -0.8
LAC1YKL008C CST9Q06032 482 aa10.06□□□□□ -0.8
LAC1YKL008C BDF1P35817 686 aa10.03□□□□□ -0.8
LAC1YKL008C DMA1P38823 416 aa9.99□□□□□ -0.81
LAC1YKL008C SLX5P32828 619 aaKnown RBP9.93□□□□□ -0.82
LAC1YKL008C MRM1P25270 412 aa9.87□□□□□ -0.83
LAC1YKL008C RCR1P38212 213 aa9.72□□□□□ -0.85
LAC1YKL008C RTG3P38165 486 aa9.7□□□□□ -0.86
LAC1YKL008C TIF4632P39936 914 aaKnown RBP9.7□□□□□ -0.86
LAC1YKL008C RAM2P29703 316 aa9.67□□□□□ -0.86
LAC1YKL008C TGL3P40308 642 aa9.63□□□□□ -0.87
LAC1YKL008C VPS29P38759 282 aa9.6□□□□□ -0.87
LAC1YKL008C YMR1P47147 688 aaKnown RBP RIP-Chip data9.53□□□□□ -0.88not detected
LAC1YKL008C MAK11P20484 414 aaKnown RBP9.5□□□□□ -0.89
LAC1YKL008C YFR006WP43590 535 aa9.49□□□□□ -0.89
LAC1YKL008C YOR238WQ08634 303 aa9.49□□□□□ -0.89
LAC1YKL008C DBP1P24784 617 aaKnown RBP9.48□□□□□ -0.89
LAC1YKL008C STS1P38637 319 aa9.48□□□□□ -0.89
LAC1YKL008C YAP5P40574 245 aa9.48□□□□□ -0.89
LAC1YKL008C NSR1P27476 414 aaKnown RBP RIP-Chip data9.47□□□□□ -0.89not detected
LAC1YKL008C PIB1Q06651 286 aa9.46□□□□□ -0.9
LAC1YKL008C SET1P38827 1080 aaKnown RBP9.44□□□□□ -0.9
LAC1YKL008C SAS10Q12136 610 aaPredicted RBP9.4□□□□□ -0.9
LAC1YKL008C COQ8P27697 501 aa9.38□□□□□ -0.91
LAC1YKL008C MIF2P35201 549 aa9.37□□□□□ -0.91
LAC1YKL008C MST1P07236 462 aa9.32□□□□□ -0.92
LAC1YKL008C EDS1P38073 919 aa9.32□□□□□ -0.92
LAC1YKL008C VMA1P17255 1071 aaKnown RBP9.28□□□□□ -0.92
LAC1YKL008C GTT3P39996 337 aa9.26□□□□□ -0.93
LAC1YKL008C VPS70P47161 811 aa9.26□□□□□ -0.93
LAC1YKL008C YPR148CQ06523 435 aa9.25□□□□□ -0.93
LAC1YKL008C IFH1P39520 1085 aa9.24□□□□□ -0.93
LAC1YKL008C PTC3P34221 468 aaKnown RBP9.23□□□□□ -0.93
LAC1YKL008C NOP53Q12080 455 aaKnown RBP9.22□□□□□ -0.93
LAC1YKL008C SAM3Q08986 587 aa9.15□□□□□ -0.94
LAC1YKL008C CKB1P43639 278 aa9.14□□□□□ -0.95
LAC1YKL008C WSC3Q12215 556 aa9.14□□□□□ -0.95
LAC1YKL008C GRE2Q12068 342 aaKnown RBP9.13□□□□□ -0.95
LAC1YKL008C ATH1P48016 1211 aa9.12□□□□□ -0.95
LAC1YKL008C YOL036WQ08206 761 aa9.11□□□□□ -0.95
LAC1YKL008C GYP5Q12344 894 aa9.11□□□□□ -0.95
LAC1YKL008C SPB4P25808 606 aaPredicted RBP9.1□□□□□ -0.95
LAC1YKL008C SET4P42948 560 aa9.1□□□□□ -0.95
LAC1YKL008C YBL029C-AQ3E756 94 aa9.08□□□□□ -0.96
LAC1YKL008C GUT1P32190 709 aa9.07□□□□□ -0.96
LAC1YKL008C DCW1P36091 449 aa9.05□□□□□ -0.96
LAC1YKL008C LEU3P08638 886 aa9.04□□□□□ -0.96
LAC1YKL008C UBP9P39967 754 aa9.04□□□□□ -0.96
LAC1YKL008C PBS2P08018 668 aa9.03□□□□□ -0.96
LAC1YKL008C REF2P42073 533 aaPredicted RBP9.03□□□□□ -0.96
LAC1YKL008C MSB4Q12317 492 aa9.02□□□□□ -0.97
LAC1YKL008C VNX1P42839 908 aa9.01□□□□□ -0.97
LAC1YKL008C ABP1P15891 592 aaKnown RBP8.99□□□□□ -0.97
LAC1YKL008C HTA1P04911 132 aaKnown RBP8.98□□□□□ -0.97
LAC1YKL008C HTA2P04912 132 aa8.98□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms