RNA–Protein interactions for RNA: YJL121C

RPE1, Transcript of D-ribulose-5-phosphate 3-epimerase, yeastyeast

Gene RPE1, Length 717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPE1YJL121C MON2P48563 1636 aaPredicted RBP12.28□□□□□ -0.44
RPE1YJL121C INO80P53115 1489 aa12.22□□□□□ -0.45
RPE1YJL121C DNA2P38859 1522 aa11.68□□□□□ -0.54
RPE1YJL121C SWR1Q05471 1514 aa11.67□□□□□ -0.54
RPE1YJL121C TY1B-DR4Q07793 1604 aa11.57□□□□□ -0.56
RPE1YJL121C TCB3Q03640 1545 aaKnown RBP11.5□□□□□ -0.57
RPE1YJL121C KOG1P38873 1557 aa11.5□□□□□ -0.57
RPE1YJL121C SGS1P35187 1447 aa11.27□□□□□ -0.6
RPE1YJL121C RSE1Q04693 1361 aaKnown RBP11.25□□□□□ -0.61
RPE1YJL121C HSL1P34244 1518 aa11.13□□□□□ -0.63
RPE1YJL121C SPT6P23615 1451 aaKnown RBP11.1□□□□□ -0.63
RPE1YJL121C SPA2P23201 1466 aaKnown RBP11□□□□□ -0.65
RPE1YJL121C HIR3P47171 1648 aa10.89□□□□□ -0.67
RPE1YJL121C ECM5Q03214 1411 aa10.86□□□□□ -0.67
RPE1YJL121C THO2P53552 1597 aaKnown RBP10.8□□□□□ -0.68
RPE1YJL121C BUD4P47136 1447 aa10.75□□□□□ -0.69
RPE1YJL121C MTC1P47018 478 aaKnown RBP10.72□□□□□ -0.69
RPE1YJL121C MDS3P53094 1487 aa10.7□□□□□ -0.7
RPE1YJL121C XRN1P22147 1528 aaKnown RBP10.67□□□□□ -0.7
RPE1YJL121C PEP1P32319 1579 aa10.6□□□□□ -0.71
RPE1YJL121C ATG2P53855 1592 aa10.55□□□□□ -0.72
RPE1YJL121C REV3P14284 1504 aa10.48□□□□□ -0.73
RPE1YJL121C BPT1P14772 1559 aa10.45□□□□□ -0.74
RPE1YJL121C TAF2P23255 1407 aa10.37□□□□□ -0.75
RPE1YJL121C SSN2P38931 1420 aa10.36□□□□□ -0.75
RPE1YJL121C SKI3P17883 1432 aaKnown RBP10.33□□□□□ -0.76
RPE1YJL121C SIN3P22579 1536 aa10.31□□□□□ -0.76
RPE1YJL121C SSK2P53599 1579 aa10.3□□□□□ -0.76
RPE1YJL121C ESP1Q03018 1630 aa10.27□□□□□ -0.77
RPE1YJL121C YCF1P39109 1515 aaKnown RBP10.25□□□□□ -0.77
RPE1YJL121C UFD4P33202 1483 aa10.14□□□□□ -0.79
RPE1YJL121C ESC1Q03661 1658 aaKnown RBP10.11□□□□□ -0.79
RPE1YJL121C TY2B-LR1P0C2J3 1770 aa10.09□□□□□ -0.79
RPE1YJL121C TY2B-FP0CX63 1770 aa10.09□□□□□ -0.79
RPE1YJL121C TY2B-GR2P0CX64 1770 aa10.09□□□□□ -0.79
RPE1YJL121C TY2B-CP25384 1770 aa10.09□□□□□ -0.79
RPE1YJL121C TY2B-DR2Q03494 1770 aa10.09□□□□□ -0.79
RPE1YJL121C TY1B-DR1Q03855 1755 aa10.09□□□□□ -0.79
RPE1YJL121C TY2B-DR3Q07791 1770 aaKnown RBP10.09□□□□□ -0.79
RPE1YJL121C TY2B-OR1Q12113 1770 aa10.09□□□□□ -0.79
RPE1YJL121C TY2B-DR1Q12472 1770 aa10.09□□□□□ -0.79
RPE1YJL121C TY2B-OR2Q12501 1770 aa10.09□□□□□ -0.79
RPE1YJL121C MYO2P19524 1574 aaKnown RBP10.07□□□□□ -0.8
RPE1YJL121C SCC2Q04002 1493 aa10.06□□□□□ -0.8
RPE1YJL121C TY1B-BRQ12193 1756 aa10.04□□□□□ -0.8
RPE1YJL121C TY1B-GR3Q12316 1755 aa10.04□□□□□ -0.8
RPE1YJL121C TY1B-ORQ92393 1755 aa10.04□□□□□ -0.8
RPE1YJL121C CDC25P04821 1589 aa10.03□□□□□ -0.8
RPE1YJL121C YPK9Q12697 1472 aa10.03□□□□□ -0.8
RPE1YJL121C DRS1P32892 752 aaKnown RBP9.99□□□□□ -0.81
RPE1YJL121C DNF1P32660 1571 aa9.99□□□□□ -0.81
RPE1YJL121C TY2B-BQ12491 1770 aa9.96□□□□□ -0.82
RPE1YJL121C RQC2Q12532 1038 aaKnown RBP9.95□□□□□ -0.82
RPE1YJL121C RPO31P04051 1460 aa9.95□□□□□ -0.82
RPE1YJL121C CHD1P32657 1468 aa9.95□□□□□ -0.82
RPE1YJL121C TY1B-HO13535 1793 aa9.93□□□□□ -0.82
RPE1YJL121C TY1B-DR5P0C2I2 1755 aa9.93□□□□□ -0.82
RPE1YJL121C TY1B-DR6P0C2I3 1755 aa9.93□□□□□ -0.82
RPE1YJL121C TY1B-LR2P0C2I5 1755 aa9.93□□□□□ -0.82
RPE1YJL121C TY1B-LR3P0C2I6 1755 aaKnown RBP9.93□□□□□ -0.82
RPE1YJL121C TY1B-PR1P0C2I9 1755 aaKnown RBP9.93□□□□□ -0.82
RPE1YJL121C TY1B-PR2P0C2J0 1756 aa9.93□□□□□ -0.82
RPE1YJL121C TY1B-PR3P0C2J1 1755 aaKnown RBP9.93□□□□□ -0.82
RPE1YJL121C TY1B-JR1P47098 1755 aa9.93□□□□□ -0.82
RPE1YJL121C TY1B-ML2Q03434 1755 aaKnown RBP9.93□□□□□ -0.82
RPE1YJL121C TY1B-ER1Q03612 1755 aa9.93□□□□□ -0.82
RPE1YJL121C TY1B-ML1Q04711 1755 aaKnown RBP9.93□□□□□ -0.82
RPE1YJL121C TY1B-GR2Q12269 1755 aa9.93□□□□□ -0.82
RPE1YJL121C TY1B-OLQ12273 1755 aa9.93□□□□□ -0.82
RPE1YJL121C TY1B-PLQ12414 1755 aaKnown RBP9.93□□□□□ -0.82
RPE1YJL121C RPA190P10964 1664 aaKnown RBP9.93□□□□□ -0.82
RPE1YJL121C TY1B-DR3Q99231 1755 aa9.93□□□□□ -0.82
RPE1YJL121C RKR1Q04781 1562 aa9.9□□□□□ -0.82
RPE1YJL121C MET5P47169 1442 aa9.89□□□□□ -0.83
RPE1YJL121C PAN1P32521 1480 aa9.86□□□□□ -0.83
RPE1YJL121C BNI1P41832 1953 aa9.83□□□□□ -0.84
RPE1YJL121C LTE1P07866 1435 aa9.81□□□□□ -0.84
RPE1YJL121C MIF2P35201 549 aa9.79□□□□□ -0.84
RPE1YJL121C TOP2P06786 1428 aaKnown RBP9.79□□□□□ -0.84
RPE1YJL121C YRF1-1P0CX20 1796 aa9.77□□□□□ -0.85
RPE1YJL121C YRF1-5P0CX21 1796 aa9.77□□□□□ -0.85
RPE1YJL121C YRF1-8P0CX22 1796 aa9.77□□□□□ -0.85
RPE1YJL121C MMS22Q06164 1454 aa9.76□□□□□ -0.85
RPE1YJL121C TY1B-JR2P47100 1755 aaKnown RBP9.73□□□□□ -0.85
RPE1YJL121C TY1B-ER2Q03619 1755 aa9.73□□□□□ -0.85
RPE1YJL121C TY1B-MR1Q04214 1755 aa9.73□□□□□ -0.85
RPE1YJL121C TY1B-MR2Q04670 1755 aaKnown RBP9.73□□□□□ -0.85
RPE1YJL121C TY1B-LR1Q12088 1755 aaKnown RBP9.73□□□□□ -0.85
RPE1YJL121C TY1B-NL1Q12112 1755 aa9.73□□□□□ -0.85
RPE1YJL121C TY1B-GR1Q12141 1755 aa9.73□□□□□ -0.85
RPE1YJL121C TY1B-BLQ12490 1755 aa9.73□□□□□ -0.85
RPE1YJL121C GEA2P39993 1459 aaKnown RBP9.72□□□□□ -0.85
RPE1YJL121C TRM732Q03496 1420 aa9.7□□□□□ -0.86
RPE1YJL121C NTE1Q04958 1679 aa9.7□□□□□ -0.86
RPE1YJL121C ITT1Q04638 464 aa9.69□□□□□ -0.86
RPE1YJL121C POL1P13382 1468 aa9.68□□□□□ -0.86
RPE1YJL121C STU1P38198 1513 aa9.64□□□□□ -0.87
RPE1YJL121C RPO21P04050 1733 aaKnown RBP9.63□□□□□ -0.87
RPE1YJL121C NUP159P40477 1460 aa9.63□□□□□ -0.87
RPE1YJL121C YOR1P53049 1477 aa9.63□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms