RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W MTC1P47018 478 aaKnown RBP7.86□□□□□ -1.15
NSP1YJL041W DRS1P32892 752 aaKnown RBP7.36□□□□□ -1.23
NSP1YJL041W FAP1P53971 965 aa6.91□□□□□ -1.3
NSP1YJL041W PRI1P10363 409 aa6.6□□□□□ -1.35
NSP1YJL041W PRY3P47033 881 aa6.51□□□□□ -1.37
NSP1YJL041W AAD16Q02895 342 aa6.51□□□□□ -1.37
NSP1YJL041W BFR2Q06631 534 aaKnown RBP6.47□□□□□ -1.37
NSP1YJL041W DIP2Q12220 943 aaPredicted RBP6.45□□□□□ -1.38
NSP1YJL041W ISW2Q08773 1120 aa6.44□□□□□ -1.38
NSP1YJL041W RPG1P38249 964 aaKnown RBP6.4□□□□□ -1.38
NSP1YJL041W YCK3P39962 524 aa6.31□□□□□ -1.4
NSP1YJL041W AVT3P36062 692 aa6.3□□□□□ -1.4
NSP1YJL041W TFA1P36100 482 aa6.25□□□□□ -1.41
NSP1YJL041W TSR3Q12094 313 aaKnown RBP6.21□□□□□ -1.42
NSP1YJL041W RSE1Q04693 1361 aaKnown RBP6.2□□□□□ -1.42
NSP1YJL041W HAA1Q12753 694 aaKnown RBP6.12□□□□□ -1.43
NSP1YJL041W RPL17AP05740 184 aaKnown RBP6□□□□□ -1.45
NSP1YJL041W RPL17BP46990 184 aaKnown RBP6□□□□□ -1.45
NSP1YJL041W REB1P21538 810 aa5.93□□□□□ -1.46
NSP1YJL041W MRPL32P25348 183 aa5.92□□□□□ -1.46
NSP1YJL041W SPT21P35209 758 aa5.83□□□□□ -1.48
NSP1YJL041W YKR023WP36119 530 aaKnown RBP5.74□□□□□ -1.49
NSP1YJL041W CDC27P38042 758 aa5.73□□□□□ -1.49
NSP1YJL041W RQC2Q12532 1038 aaKnown RBP5.72□□□□□ -1.49
NSP1YJL041W YGL015CP33199 130 aa5.68□□□□□ -1.5
NSP1YJL041W RIM101P33400 625 aa5.62□□□□□ -1.51
NSP1YJL041W TFC8Q12308 588 aa5.6□□□□□ -1.51
NSP1YJL041W HOP09932 586 aa5.57□□□□□ -1.52
NSP1YJL041W DCD1P06773 312 aa5.56□□□□□ -1.52
NSP1YJL041W UBP10P53874 792 aaPredicted RBP5.53□□□□□ -1.52
NSP1YJL041W MAP2P38174 421 aaKnown RBP5.52□□□□□ -1.53
NSP1YJL041W OXP1P28273 1286 aa5.44□□□□□ -1.54
NSP1YJL041W BCH2P36122 765 aa5.42□□□□□ -1.54
NSP1YJL041W SCY1P53009 804 aa5.39□□□□□ -1.55
NSP1YJL041W SLX5P32828 619 aaKnown RBP5.31□□□□□ -1.56
NSP1YJL041W EPS1P40557 701 aa5.28□□□□□ -1.56
NSP1YJL041W BDF1P35817 686 aa5.26□□□□□ -1.57
NSP1YJL041W TGL3P40308 642 aa5.26□□□□□ -1.57
NSP1YJL041W PTP3P40048 928 aa5.26□□□□□ -1.57
NSP1YJL041W YIL055CP40523 627 aaKnown RBP5.25□□□□□ -1.57
NSP1YJL041W TIF4632P39936 914 aaKnown RBP5.24□□□□□ -1.57
NSP1YJL041W RSM7P47150 247 aa5.23□□□□□ -1.57
NSP1YJL041W BUD31P25337 157 aaPredicted RBP5.22□□□□□ -1.57
NSP1YJL041W SSP1P38871 571 aa5.22□□□□□ -1.57
NSP1YJL041W YAH1Q12184 172 aaKnown RBP5.2□□□□□ -1.58
NSP1YJL041W YLR271WQ06152 274 aa5.2□□□□□ -1.58
NSP1YJL041W DMA1P38823 416 aa5.19□□□□□ -1.58
NSP1YJL041W AI2P03876 854 aa5.19□□□□□ -1.58
NSP1YJL041W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
NSP1YJL041W BBC1P47068 1157 aa5.14□□□□□ -1.59
NSP1YJL041W PSD2P53037 1138 aaKnown RBP5.13□□□□□ -1.59
NSP1YJL041W MST1P07236 462 aa5.11□□□□□ -1.59
NSP1YJL041W NSR1P27476 414 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
NSP1YJL041W TAF7Q05021 590 aa5.07□□□□□ -1.6
NSP1YJL041W UBP9P39967 754 aa5.02□□□□□ -1.61
NSP1YJL041W MGA2P40578 1113 aa5.02□□□□□ -1.61
NSP1YJL041W CST9Q06032 482 aa5.02□□□□□ -1.61
NSP1YJL041W YOR238WQ08634 303 aa5.02□□□□□ -1.61
NSP1YJL041W YAP5P40574 245 aa5□□□□□ -1.61
NSP1YJL041W MRM1P25270 412 aa4.99□□□□□ -1.61
NSP1YJL041W YBL029C-AQ3E756 94 aa4.97□□□□□ -1.61
NSP1YJL041W NOP2P40991 618 aaKnown RBP4.96□□□□□ -1.62
NSP1YJL041W SKI3P17883 1432 aaKnown RBP4.95□□□□□ -1.62
NSP1YJL041W LEO1P38439 464 aa4.95□□□□□ -1.62
NSP1YJL041W URN1Q06525 465 aaKnown RBP4.95□□□□□ -1.62
NSP1YJL041W VPS29P38759 282 aa4.93□□□□□ -1.62
NSP1YJL041W VNX1P42839 908 aa4.92□□□□□ -1.62
NSP1YJL041W CAB3P36076 571 aa4.91□□□□□ -1.62
NSP1YJL041W RCR1P38212 213 aa4.9□□□□□ -1.62
NSP1YJL041W EBP2P36049 427 aaKnown RBP4.9□□□□□ -1.63
NSP1YJL041W SIS1P25294 352 aaKnown RBP4.89□□□□□ -1.63
NSP1YJL041W SAS10Q12136 610 aaPredicted RBP4.89□□□□□ -1.63
NSP1YJL041W RTG3P38165 486 aa4.89□□□□□ -1.63
NSP1YJL041W PIB1Q06651 286 aa4.89□□□□□ -1.63
NSP1YJL041W STS1P38637 319 aa4.88□□□□□ -1.63
NSP1YJL041W YMR1P47147 688 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
NSP1YJL041W LEU3P08638 886 aa4.86□□□□□ -1.63
NSP1YJL041W DBP1P24784 617 aaKnown RBP4.85□□□□□ -1.63
NSP1YJL041W WSC3Q12215 556 aa4.85□□□□□ -1.63
NSP1YJL041W GTT3P39996 337 aa4.83□□□□□ -1.64
NSP1YJL041W SPP1Q03012 353 aa4.83□□□□□ -1.64
NSP1YJL041W YFR006WP43590 535 aa4.83□□□□□ -1.64
NSP1YJL041W SPA2P23201 1466 aaKnown RBP4.82□□□□□ -1.64
NSP1YJL041W TIF11P38912 153 aaKnown RBP4.82□□□□□ -1.64
NSP1YJL041W VMA1P17255 1071 aaKnown RBP4.81□□□□□ -1.64
NSP1YJL041W SIS2P36024 562 aa4.8□□□□□ -1.64
NSP1YJL041W IFH1P39520 1085 aa4.8□□□□□ -1.64
NSP1YJL041W IOC2Q12072 812 aa4.8□□□□□ -1.64
NSP1YJL041W YOL036WQ08206 761 aa4.79□□□□□ -1.64
NSP1YJL041W SAM3Q08986 587 aa4.79□□□□□ -1.64
NSP1YJL041W MSB4Q12317 492 aa4.79□□□□□ -1.64
NSP1YJL041W FKH1P40466 484 aa4.78□□□□□ -1.64
NSP1YJL041W CKB1P43639 278 aa4.78□□□□□ -1.64
NSP1YJL041W AIR2Q12476 344 aaKnown RBP4.78□□□□□ -1.64
NSP1YJL041W RAM2P29703 316 aa4.77□□□□□ -1.65
NSP1YJL041W ULI1P43604 169 aa4.76□□□□□ -1.65
NSP1YJL041W SET4P42948 560 aa4.75□□□□□ -1.65
NSP1YJL041W SET1P38827 1080 aaKnown RBP4.75□□□□□ -1.65
NSP1YJL041W LDB19Q12502 818 aa4.75□□□□□ -1.65
NSP1YJL041W YRB30P53107 440 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms