RNA–Protein interactions for RNA: YHR197W

RIX1, Transcript of Component of the Rix1 complex and possibly pre-replicative complexes, yeastyeast

Gene RIX1, Length 2,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIX1YHR197W MTC1P47018 478 aaKnown RBP7.55□□□□□ -1.2
RIX1YHR197W DRS1P32892 752 aaKnown RBP7.04□□□□□ -1.28
RIX1YHR197W FAP1P53971 965 aa6.76□□□□□ -1.33
RIX1YHR197W PRY3P47033 881 aa6.41□□□□□ -1.38
RIX1YHR197W PRI1P10363 409 aa6.38□□□□□ -1.39
RIX1YHR197W YCK3P39962 524 aa6.33□□□□□ -1.4
RIX1YHR197W AAD16Q02895 342 aa6.28□□□□□ -1.4
RIX1YHR197W DIP2Q12220 943 aaPredicted RBP6.18□□□□□ -1.42
RIX1YHR197W RPG1P38249 964 aaKnown RBP6.15□□□□□ -1.43
RIX1YHR197W ISW2Q08773 1120 aa6.14□□□□□ -1.43
RIX1YHR197W AVT3P36062 692 aa6.06□□□□□ -1.44
RIX1YHR197W TSR3Q12094 313 aaKnown RBP6.02□□□□□ -1.45
RIX1YHR197W HAA1Q12753 694 aaKnown RBP5.94□□□□□ -1.46
RIX1YHR197W RSE1Q04693 1361 aaKnown RBP5.91□□□□□ -1.46
RIX1YHR197W BFR2Q06631 534 aaKnown RBP5.9□□□□□ -1.47
RIX1YHR197W TFA1P36100 482 aa5.87□□□□□ -1.47
RIX1YHR197W RPL17AP05740 184 aaKnown RBP5.75□□□□□ -1.49
RIX1YHR197W RPL17BP46990 184 aaKnown RBP5.75□□□□□ -1.49
RIX1YHR197W REB1P21538 810 aa5.65□□□□□ -1.51
RIX1YHR197W MRPL32P25348 183 aa5.65□□□□□ -1.51
RIX1YHR197W SPT21P35209 758 aa5.64□□□□□ -1.51
RIX1YHR197W YKR023WP36119 530 aaKnown RBP5.55□□□□□ -1.52
RIX1YHR197W CDC27P38042 758 aa5.55□□□□□ -1.52
RIX1YHR197W YGL015CP33199 130 aa5.47□□□□□ -1.53
RIX1YHR197W RIM101P33400 625 aa5.41□□□□□ -1.54
RIX1YHR197W RQC2Q12532 1038 aaKnown RBP5.41□□□□□ -1.54
RIX1YHR197W DCD1P06773 312 aa5.4□□□□□ -1.55
RIX1YHR197W TFC8Q12308 588 aa5.4□□□□□ -1.55
RIX1YHR197W TAF7Q05021 590 aa5.39□□□□□ -1.55
RIX1YHR197W HOP09932 586 aa5.38□□□□□ -1.55
RIX1YHR197W MAP2P38174 421 aaKnown RBP5.34□□□□□ -1.56
RIX1YHR197W UBP10P53874 792 aaPredicted RBP5.28□□□□□ -1.56
RIX1YHR197W OXP1P28273 1286 aa5.27□□□□□ -1.57
RIX1YHR197W BCH2P36122 765 aa5.23□□□□□ -1.57
RIX1YHR197W SCY1P53009 804 aa5.18□□□□□ -1.58
RIX1YHR197W BUD31P25337 157 aaPredicted RBP5.16□□□□□ -1.58
RIX1YHR197W SLX5P32828 619 aaKnown RBP5.07□□□□□ -1.6
RIX1YHR197W EPS1P40557 701 aa5.07□□□□□ -1.6
RIX1YHR197W BDF1P35817 686 aa5.07□□□□□ -1.6
RIX1YHR197W DMA1P38823 416 aa5.06□□□□□ -1.6
RIX1YHR197W TGL3P40308 642 aa5.03□□□□□ -1.6
RIX1YHR197W PTP3P40048 928 aa5.01□□□□□ -1.61
RIX1YHR197W YLR271WQ06152 274 aa5.01□□□□□ -1.61
RIX1YHR197W YIL055CP40523 627 aaKnown RBP5□□□□□ -1.61
RIX1YHR197W RSM7P47150 247 aa5□□□□□ -1.61
RIX1YHR197W YAH1Q12184 172 aaKnown RBP4.99□□□□□ -1.61
RIX1YHR197W AI2P03876 854 aa4.97□□□□□ -1.61
RIX1YHR197W TIF4632P39936 914 aaKnown RBP4.97□□□□□ -1.61
RIX1YHR197W LEO1P38439 464 aa4.96□□□□□ -1.62
RIX1YHR197W PSD2P53037 1138 aaKnown RBP4.94□□□□□ -1.62
RIX1YHR197W MST1P07236 462 aa4.91□□□□□ -1.62
RIX1YHR197W SSP1P38871 571 aa4.88□□□□□ -1.63
RIX1YHR197W BBC1P47068 1157 aa4.88□□□□□ -1.63
RIX1YHR197W NSR1P27476 414 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
RIX1YHR197W CST9Q06032 482 aa4.85□□□□□ -1.63
RIX1YHR197W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64 RIP-Chip
RIX1YHR197W YBL029C-AQ3E756 94 aa4.8□□□□□ -1.64
RIX1YHR197W MRM1P25270 412 aa4.79□□□□□ -1.64
RIX1YHR197W SIS1P25294 352 aaKnown RBP4.78□□□□□ -1.64
RIX1YHR197W UBP9P39967 754 aa4.78□□□□□ -1.64
RIX1YHR197W YOR238WQ08634 303 aa4.78□□□□□ -1.64
RIX1YHR197W YAP5P40574 245 aa4.76□□□□□ -1.65
RIX1YHR197W RCR1P38212 213 aa4.76□□□□□ -1.65
RIX1YHR197W VPS29P38759 282 aa4.76□□□□□ -1.65
RIX1YHR197W MGA2P40578 1113 aa4.76□□□□□ -1.65
RIX1YHR197W VNX1P42839 908 aa4.73□□□□□ -1.65
RIX1YHR197W PIB1Q06651 286 aa4.71□□□□□ -1.65
RIX1YHR197W ABP1P15891 592 aaKnown RBP4.71□□□□□ -1.66
RIX1YHR197W LEU3P08638 886 aa4.7□□□□□ -1.66
RIX1YHR197W STS1P38637 319 aa4.7□□□□□ -1.66
RIX1YHR197W SAS10Q12136 610 aaPredicted RBP4.66□□□□□ -1.66
RIX1YHR197W RTG3P38165 486 aa4.66□□□□□ -1.66
RIX1YHR197W YFR006WP43590 535 aa4.65□□□□□ -1.66
RIX1YHR197W YMR1P47147 688 aaKnown RBP RIP-Chip data4.65□□□□□ -1.66not detected
RIX1YHR197W WSC3Q12215 556 aa4.65□□□□□ -1.66
RIX1YHR197W DBP1P24784 617 aaKnown RBP4.65□□□□□ -1.67
RIX1YHR197W IOC2Q12072 812 aa4.62□□□□□ -1.67
RIX1YHR197W AIR2Q12476 344 aaKnown RBP4.62□□□□□ -1.67
RIX1YHR197W VMA1P17255 1071 aaKnown RBP4.61□□□□□ -1.67
RIX1YHR197W SPP1Q03012 353 aa4.61□□□□□ -1.67
RIX1YHR197W TIF11P38912 153 aaKnown RBP4.61□□□□□ -1.67
RIX1YHR197W RAM2P29703 316 aa4.6□□□□□ -1.67
RIX1YHR197W IFH1P39520 1085 aa4.6□□□□□ -1.67
RIX1YHR197W SAM3Q08986 587 aa4.6□□□□□ -1.67
RIX1YHR197W FKH1P40466 484 aa4.59□□□□□ -1.67
RIX1YHR197W DMA2P53924 522 aa4.59□□□□□ -1.67
RIX1YHR197W YOL036WQ08206 761 aa4.59□□□□□ -1.67
RIX1YHR197W GTT3P39996 337 aa4.58□□□□□ -1.68
RIX1YHR197W SET4P42948 560 aa4.56□□□□□ -1.68
RIX1YHR197W LDB19Q12502 818 aa4.55□□□□□ -1.68
RIX1YHR197W ULI1P43604 169 aa4.55□□□□□ -1.68
RIX1YHR197W MSB4Q12317 492 aa4.55□□□□□ -1.68
RIX1YHR197W EDS1P38073 919 aa4.54□□□□□ -1.68
RIX1YHR197W TRP5P00931 707 aaKnown RBP4.53□□□□□ -1.68
RIX1YHR197W MAK11P20484 414 aaKnown RBP4.51□□□□□ -1.69
RIX1YHR197W ORC1P54784 914 aaPredicted RBP4.51□□□□□ -1.69
RIX1YHR197W DAN4P47179 1161 aa4.5□□□□□ -1.69
RIX1YHR197W NST1P53935 1240 aa4.5□□□□□ -1.69
RIX1YHR197W IOC4Q04213 475 aa4.5□□□□□ -1.69
RIX1YHR197W NAP1P25293 417 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms