RNA–Protein interactions for RNA: YFL055W

AGP3, Transcript of Low-affinity amino acid permease, yeastyeast

Gene AGP3, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AGP3YFL055W SGS1P35187 1447 aa13.86□□□□□ -0.19
AGP3YFL055W MON2P48563 1636 aaPredicted RBP13.84□□□□□ -0.19
AGP3YFL055W INO80P53115 1489 aa13.84□□□□□ -0.19
AGP3YFL055W SPA2P23201 1466 aaKnown RBP13.67□□□□□ -0.22
AGP3YFL055W TCB3Q03640 1545 aaKnown RBP13.65□□□□□ -0.22
AGP3YFL055W TY1B-DR4Q07793 1604 aa13.53□□□□□ -0.24
AGP3YFL055W SSN2P38931 1420 aa13.49□□□□□ -0.25
AGP3YFL055W SWR1Q05471 1514 aa13.43□□□□□ -0.26
AGP3YFL055W HSL1P34244 1518 aa13.21□□□□□ -0.29
AGP3YFL055W DNA2P38859 1522 aa13.21□□□□□ -0.3
AGP3YFL055W SPT6P23615 1451 aaKnown RBP13.19□□□□□ -0.3
AGP3YFL055W DRS1P32892 752 aaKnown RBP13.07□□□□□ -0.32
AGP3YFL055W KOG1P38873 1557 aa13.07□□□□□ -0.32
AGP3YFL055W HIR3P47171 1648 aa12.95□□□□□ -0.34
AGP3YFL055W XRN1P22147 1528 aaKnown RBP12.82□□□□□ -0.36
AGP3YFL055W SKI3P17883 1432 aaKnown RBP12.72□□□□□ -0.37
AGP3YFL055W ECM5Q03214 1411 aa12.67□□□□□ -0.38
AGP3YFL055W BUD4P47136 1447 aa12.65□□□□□ -0.38
AGP3YFL055W THO2P53552 1597 aaKnown RBP12.63□□□□□ -0.39
AGP3YFL055W REV3P14284 1504 aa12.61□□□□□ -0.39
AGP3YFL055W TAF2P23255 1407 aa12.49□□□□□ -0.41
AGP3YFL055W MDS3P53094 1487 aa12.47□□□□□ -0.41
AGP3YFL055W SIN3P22579 1536 aa12.47□□□□□ -0.41
AGP3YFL055W ATG2P53855 1592 aa12.43□□□□□ -0.42
AGP3YFL055W RSE1Q04693 1361 aaKnown RBP12.42□□□□□ -0.42
AGP3YFL055W CHD1P32657 1468 aa12.4□□□□□ -0.42
AGP3YFL055W MMS22Q06164 1454 aa12.4□□□□□ -0.42
AGP3YFL055W PEP1P32319 1579 aa12.4□□□□□ -0.42
AGP3YFL055W SSK2P53599 1579 aa12.39□□□□□ -0.43
AGP3YFL055W ESP1Q03018 1630 aa12.3□□□□□ -0.44
AGP3YFL055W MYO2P19524 1574 aaKnown RBP12.19□□□□□ -0.46
AGP3YFL055W YPK9Q12697 1472 aa12.14□□□□□ -0.47
AGP3YFL055W STU1P38198 1513 aa12.1□□□□□ -0.47
AGP3YFL055W BPT1P14772 1559 aa12.09□□□□□ -0.47
AGP3YFL055W SCC2Q04002 1493 aa12.09□□□□□ -0.47
AGP3YFL055W UFD4P33202 1483 aa12.07□□□□□ -0.48
AGP3YFL055W MTC1P47018 478 aaKnown RBP12.07□□□□□ -0.48
AGP3YFL055W POL1P13382 1468 aa12.06□□□□□ -0.48
AGP3YFL055W YTA7P40340 1379 aa12.01□□□□□ -0.49
AGP3YFL055W RPO31P04051 1460 aa12.01□□□□□ -0.49
AGP3YFL055W SAS10Q12136 610 aaPredicted RBP11.99□□□□□ -0.49
AGP3YFL055W TRM732Q03496 1420 aa11.98□□□□□ -0.49
AGP3YFL055W NOP2P40991 618 aaKnown RBP11.95□□□□□ -0.5
AGP3YFL055W NSR1P27476 414 aaKnown RBP RIP-Chip data11.94□□□□□ -0.5not detected
AGP3YFL055W YCF1P39109 1515 aaKnown RBP11.92□□□□□ -0.5
AGP3YFL055W RKR1Q04781 1562 aa11.9□□□□□ -0.5
AGP3YFL055W IKI3Q06706 1349 aaKnown RBP11.89□□□□□ -0.51
AGP3YFL055W TOP2P06786 1428 aaKnown RBP11.88□□□□□ -0.51
AGP3YFL055W TY2B-LR1P0C2J3 1770 aa11.88□□□□□ -0.51
AGP3YFL055W TY2B-FP0CX63 1770 aa11.88□□□□□ -0.51
AGP3YFL055W TY2B-GR2P0CX64 1770 aa11.88□□□□□ -0.51
AGP3YFL055W TY2B-CP25384 1770 aa11.88□□□□□ -0.51
AGP3YFL055W TY2B-DR2Q03494 1770 aa11.88□□□□□ -0.51
AGP3YFL055W TY1B-DR1Q03855 1755 aa11.88□□□□□ -0.51
AGP3YFL055W TY2B-DR3Q07791 1770 aaKnown RBP11.88□□□□□ -0.51
AGP3YFL055W TY2B-OR1Q12113 1770 aa11.88□□□□□ -0.51
AGP3YFL055W TY2B-DR1Q12472 1770 aa11.88□□□□□ -0.51
AGP3YFL055W TY2B-OR2Q12501 1770 aa11.88□□□□□ -0.51
AGP3YFL055W MYO4P32492 1471 aa11.84□□□□□ -0.51
AGP3YFL055W YOR1P53049 1477 aa11.84□□□□□ -0.51
AGP3YFL055W SPP41P38904 1435 aa11.82□□□□□ -0.52
AGP3YFL055W RQC2Q12532 1038 aaKnown RBP11.81□□□□□ -0.52
AGP3YFL055W CDC25P04821 1589 aa11.78□□□□□ -0.52
AGP3YFL055W TY1B-DR3Q99231 1755 aa11.77□□□□□ -0.53
AGP3YFL055W SMC4Q12267 1418 aa11.76□□□□□ -0.53
AGP3YFL055W NUP170P38181 1502 aa11.75□□□□□ -0.53
AGP3YFL055W TY1B-BRQ12193 1756 aa11.75□□□□□ -0.53
AGP3YFL055W TY1B-GR3Q12316 1755 aa11.75□□□□□ -0.53
AGP3YFL055W TY2B-BQ12491 1770 aa11.75□□□□□ -0.53
AGP3YFL055W TY1B-ORQ92393 1755 aa11.75□□□□□ -0.53
AGP3YFL055W SNQ2P32568 1501 aaKnown RBP11.72□□□□□ -0.53
AGP3YFL055W SSM4P40318 1319 aa11.71□□□□□ -0.53
AGP3YFL055W TAF7Q05021 590 aa11.71□□□□□ -0.54
AGP3YFL055W PAN1P32521 1480 aa11.7□□□□□ -0.54
AGP3YFL055W TY1B-HO13535 1793 aa11.69□□□□□ -0.54
AGP3YFL055W TY1B-DR5P0C2I2 1755 aa11.69□□□□□ -0.54
AGP3YFL055W TY1B-DR6P0C2I3 1755 aa11.69□□□□□ -0.54
AGP3YFL055W TY1B-LR2P0C2I5 1755 aa11.69□□□□□ -0.54
AGP3YFL055W TY1B-LR3P0C2I6 1755 aaKnown RBP11.69□□□□□ -0.54
AGP3YFL055W TY1B-PR1P0C2I9 1755 aaKnown RBP11.69□□□□□ -0.54
AGP3YFL055W TY1B-PR2P0C2J0 1756 aa11.69□□□□□ -0.54
AGP3YFL055W TY1B-PR3P0C2J1 1755 aaKnown RBP11.69□□□□□ -0.54
AGP3YFL055W TY1B-JR1P47098 1755 aa11.69□□□□□ -0.54
AGP3YFL055W TY1B-ML2Q03434 1755 aaKnown RBP11.69□□□□□ -0.54
AGP3YFL055W TY1B-ER1Q03612 1755 aa11.69□□□□□ -0.54
AGP3YFL055W TY1B-ML1Q04711 1755 aaKnown RBP11.69□□□□□ -0.54
AGP3YFL055W TY1B-GR2Q12269 1755 aa11.69□□□□□ -0.54
AGP3YFL055W TY1B-OLQ12273 1755 aa11.69□□□□□ -0.54
AGP3YFL055W TY1B-PLQ12414 1755 aaKnown RBP11.69□□□□□ -0.54
AGP3YFL055W MLP2P40457 1679 aa11.68□□□□□ -0.54
AGP3YFL055W STH1P32597 1359 aa11.67□□□□□ -0.54
AGP3YFL055W DNF1P32660 1571 aa11.66□□□□□ -0.54
AGP3YFL055W ESC1Q03661 1658 aaKnown RBP11.66□□□□□ -0.54
AGP3YFL055W PDR15Q04182 1529 aaKnown RBP11.6□□□□□ -0.55
AGP3YFL055W GEA1P47102 1408 aaPredicted RBP11.57□□□□□ -0.56
AGP3YFL055W RPA190P10964 1664 aaKnown RBP11.57□□□□□ -0.56
AGP3YFL055W ENP1P38333 483 aaKnown RBP11.57□□□□□ -0.56
AGP3YFL055W POL5P39985 1022 aaKnown RBP11.57□□□□□ -0.56
AGP3YFL055W IFH1P39520 1085 aa11.55□□□□□ -0.56
AGP3YFL055W TSC11P40061 1430 aa11.55□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms