RNA–Protein interactions for RNA: YER165W

PAB1, Transcript of Poly(A) binding protein, yeastyeast

Gene PAB1, Length 1,734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAB1YER165W DRS1P32892 752 aaKnown RBP19.53■□□□□ 0.72
PAB1YER165W MTC1P47018 478 aaKnown RBP18.33■□□□□ 0.52
PAB1YER165W BFR2Q06631 534 aaKnown RBP17.41■□□□□ 0.38
PAB1YER165W TFA1P36100 482 aa17.21■□□□□ 0.35
PAB1YER165W AVT3P36062 692 aa16.39■□□□□ 0.21
PAB1YER165W DIP2Q12220 943 aaPredicted RBP16.25■□□□□ 0.19
PAB1YER165W RQC2Q12532 1038 aaKnown RBP15.77■□□□□ 0.11
PAB1YER165W RSE1Q04693 1361 aaKnown RBP15.01□□□□□ -0.01
PAB1YER165W ISW2Q08773 1120 aa14.63□□□□□ -0.07
PAB1YER165W DMA1P38823 416 aa14.58□□□□□ -0.07
PAB1YER165W TAF7Q05021 590 aa14.4□□□□□ -0.1
PAB1YER165W RPG1P38249 964 aaKnown RBP14.39□□□□□ -0.11
PAB1YER165W RPL17AP05740 184 aaKnown RBP14.37□□□□□ -0.11
PAB1YER165W RPL17BP46990 184 aaKnown RBP14.37□□□□□ -0.11
PAB1YER165W PTP3P40048 928 aa14.22□□□□□ -0.13
PAB1YER165W MON2P48563 1636 aaPredicted RBP14.14□□□□□ -0.15
PAB1YER165W INO80P53115 1489 aa14.13□□□□□ -0.15
PAB1YER165W REB1P21538 810 aa14.07□□□□□ -0.16
PAB1YER165W PRI1P10363 409 aa14.07□□□□□ -0.16
PAB1YER165W RIM101P33400 625 aa14.04□□□□□ -0.16
PAB1YER165W SPT21P35209 758 aa13.99□□□□□ -0.17
PAB1YER165W LEO1P38439 464 aa13.92□□□□□ -0.18
PAB1YER165W SSP1P38871 571 aa13.91□□□□□ -0.18
PAB1YER165W FAP1P53971 965 aa13.66□□□□□ -0.22
PAB1YER165W AAD16Q02895 342 aa13.64□□□□□ -0.23
PAB1YER165W OXP1P28273 1286 aa13.63□□□□□ -0.23
PAB1YER165W ARP8Q12386 881 aaKnown RBP RIP-Chip data13.56□□□□□ -0.24not detected
PAB1YER165W YAH1Q12184 172 aaKnown RBP13.53□□□□□ -0.24
PAB1YER165W SAS10Q12136 610 aaPredicted RBP13.5□□□□□ -0.25
PAB1YER165W LEU3P08638 886 aa13.49□□□□□ -0.25
PAB1YER165W DNA2P38859 1522 aa13.47□□□□□ -0.25
PAB1YER165W YLR271WQ06152 274 aa13.45□□□□□ -0.26
PAB1YER165W SWR1Q05471 1514 aa13.44□□□□□ -0.26
PAB1YER165W TSR3Q12094 313 aaKnown RBP13.39□□□□□ -0.27
PAB1YER165W YIL055CP40523 627 aaKnown RBP13.39□□□□□ -0.27
PAB1YER165W MGA2P40578 1113 aa13.31□□□□□ -0.28
PAB1YER165W TCB3Q03640 1545 aaKnown RBP13.29□□□□□ -0.28
PAB1YER165W TY1B-DR4Q07793 1604 aa13.26□□□□□ -0.29
PAB1YER165W YKR023WP36119 530 aaKnown RBP13.26□□□□□ -0.29
PAB1YER165W KOG1P38873 1557 aa13.26□□□□□ -0.29
PAB1YER165W RSM7P47150 247 aa13.2□□□□□ -0.3
PAB1YER165W CST9Q06032 482 aa13.1□□□□□ -0.31
PAB1YER165W SGS1P35187 1447 aa13.02□□□□□ -0.32
PAB1YER165W RPN1P38764 993 aaKnown RBP12.99□□□□□ -0.33
PAB1YER165W TFC8Q12308 588 aa12.99□□□□□ -0.33
PAB1YER165W PSD2P53037 1138 aaKnown RBP12.99□□□□□ -0.33
PAB1YER165W HOP09932 586 aa12.95□□□□□ -0.34
PAB1YER165W AI2P03876 854 aa12.88□□□□□ -0.35
PAB1YER165W DMA2P53924 522 aa12.88□□□□□ -0.35
PAB1YER165W MRPL32P25348 183 aa12.85□□□□□ -0.35
PAB1YER165W DCD1P06773 312 aa12.82□□□□□ -0.36
PAB1YER165W HSL1P34244 1518 aa12.81□□□□□ -0.36
PAB1YER165W SPT6P23615 1451 aaKnown RBP12.8□□□□□ -0.36
PAB1YER165W RAM2P29703 316 aa12.79□□□□□ -0.36
PAB1YER165W SET1P38827 1080 aaKnown RBP12.76□□□□□ -0.37
PAB1YER165W CKB1P43639 278 aa12.76□□□□□ -0.37
PAB1YER165W YPR148CQ06523 435 aa12.76□□□□□ -0.37
PAB1YER165W SPB4P25808 606 aaPredicted RBP12.74□□□□□ -0.37
PAB1YER165W PRY3P47033 881 aa12.73□□□□□ -0.37
PAB1YER165W BBC1P47068 1157 aa12.71□□□□□ -0.37
PAB1YER165W SPA2P23201 1466 aaKnown RBP12.7□□□□□ -0.38
PAB1YER165W CDC27P38042 758 aa12.69□□□□□ -0.38
PAB1YER165W VPS70P47161 811 aa12.68□□□□□ -0.38
PAB1YER165W IFH1P39520 1085 aa12.66□□□□□ -0.38
PAB1YER165W BCH2P36122 765 aa12.65□□□□□ -0.38
PAB1YER165W ABP1P15891 592 aaKnown RBP12.6□□□□□ -0.39
PAB1YER165W RLF2Q12495 606 aa12.59□□□□□ -0.39
PAB1YER165W RCR1P38212 213 aa12.55□□□□□ -0.4
PAB1YER165W ECM5Q03214 1411 aa12.55□□□□□ -0.4
PAB1YER165W MRM1P25270 412 aa12.54□□□□□ -0.4
PAB1YER165W DSF2P38213 736 aa12.53□□□□□ -0.4
PAB1YER165W HIR3P47171 1648 aa12.52□□□□□ -0.41
PAB1YER165W EPS1P40557 701 aa12.51□□□□□ -0.41
PAB1YER165W MAK11P20484 414 aaKnown RBP12.48□□□□□ -0.41
PAB1YER165W RTG3P38165 486 aa12.46□□□□□ -0.41
PAB1YER165W BUD4P47136 1447 aa12.45□□□□□ -0.42
PAB1YER165W THO2P53552 1597 aaKnown RBP12.44□□□□□ -0.42
PAB1YER165W PBS2P08018 668 aa12.43□□□□□ -0.42
PAB1YER165W YNR021WP53723 404 aaKnown RBP12.42□□□□□ -0.42
PAB1YER165W BDF1P35817 686 aa12.4□□□□□ -0.42
PAB1YER165W KIN1P13185 1064 aa12.39□□□□□ -0.43
PAB1YER165W MDS3P53094 1487 aa12.35□□□□□ -0.43
PAB1YER165W COQ8P27697 501 aa12.3□□□□□ -0.44
PAB1YER165W AIM7Q12156 149 aa12.29□□□□□ -0.44
PAB1YER165W XRN1P22147 1528 aaKnown RBP12.28□□□□□ -0.44
PAB1YER165W MAM3Q12296 706 aa12.27□□□□□ -0.45
PAB1YER165W NOP53Q12080 455 aaKnown RBP12.26□□□□□ -0.45
PAB1YER165W GLC3P32775 704 aa12.25□□□□□ -0.45
PAB1YER165W VPS29P38759 282 aa12.25□□□□□ -0.45
PAB1YER165W HGH1P48362 394 aaKnown RBP12.24□□□□□ -0.45
PAB1YER165W IES2P40154 320 aa12.2□□□□□ -0.46
PAB1YER165W REF2P42073 533 aaPredicted RBP12.2□□□□□ -0.46
PAB1YER165W NUP42P49686 430 aaKnown RBP12.19□□□□□ -0.46
PAB1YER165W SCY1P53009 804 aa12.19□□□□□ -0.46
PAB1YER165W PEP1P32319 1579 aa12.18□□□□□ -0.46
PAB1YER165W YCK3P39962 524 aa12.17□□□□□ -0.46
PAB1YER165W DIT2P21595 489 aa12.16□□□□□ -0.46
PAB1YER165W MAK21Q12176 1025 aaKnown RBP12.11□□□□□ -0.47
PAB1YER165W HAA1Q12753 694 aaKnown RBP12.11□□□□□ -0.47
PAB1YER165W REV3P14284 1504 aa12.11□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms