RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	MTC1	P47018	478 aa	Known RBP	7.35	□□□□□ -1.23
DOT6	YER088C	DRS1	P32892	752 aa	Known RBP	7.25	□□□□□ -1.25
DOT6	YER088C	FAP1	P53971	965 aa		6.21	□□□□□ -1.41
DOT6	YER088C	DIP2	Q12220	943 aa	Predicted RBP	6.21	□□□□□ -1.41
DOT6	YER088C	BFR2	Q06631	534 aa	Known RBP	6.21	□□□□□ -1.42
DOT6	YER088C	AVT3	P36062	692 aa		6.16	□□□□□ -1.42
DOT6	YER088C	PRI1	P10363	409 aa		5.96	□□□□□ -1.45
DOT6	YER088C	ISW2	Q08773	1120 aa		5.94	□□□□□ -1.46
DOT6	YER088C	RPG1	P38249	964 aa	Known RBP	5.89	□□□□□ -1.47
DOT6	YER088C	RSE1	Q04693	1361 aa	Known RBP	5.87	□□□□□ -1.47
DOT6	YER088C	PRY3	P47033	881 aa		5.85	□□□□□ -1.47
DOT6	YER088C	TFA1	P36100	482 aa		5.84	□□□□□ -1.48
DOT6	YER088C	AAD16	Q02895	342 aa		5.84	□□□□□ -1.48
DOT6	YER088C	RPL17A	P05740	184 aa	Known RBP	5.65	□□□□□ -1.51
DOT6	YER088C	RPL17B	P46990	184 aa	Known RBP	5.65	□□□□□ -1.51
DOT6	YER088C	TSR3	Q12094	313 aa	Known RBP	5.63	□□□□□ -1.51
DOT6	YER088C	REB1	P21538	810 aa		5.56	□□□□□ -1.52
DOT6	YER088C	SPT21	P35209	758 aa		5.52	□□□□□ -1.53
DOT6	YER088C	YCK3	P39962	524 aa		5.52	□□□□□ -1.53
DOT6	YER088C	HAA1	Q12753	694 aa	Known RBP	5.47	□□□□□ -1.53
DOT6	YER088C	RIM101	P33400	625 aa		5.41	□□□□□ -1.54
DOT6	YER088C	MRPL32	P25348	183 aa		5.37	□□□□□ -1.55
DOT6	YER088C	YKR023W	P36119	530 aa	Known RBP	5.36	□□□□□ -1.55
DOT6	YER088C	CDC27	P38042	758 aa		5.25	□□□□□ -1.57
DOT6	YER088C	OXP1	P28273	1286 aa		5.24	□□□□□ -1.57
DOT6	YER088C	TFC8	Q12308	588 aa		5.23	□□□□□ -1.57
DOT6	YER088C	HO	P09932	586 aa		5.2	□□□□□ -1.58
DOT6	YER088C	DCD1	P06773	312 aa		5.18	□□□□□ -1.58
DOT6	YER088C	PTP3	P40048	928 aa		5.09	□□□□□ -1.59
DOT6	YER088C	SSP1	P38871	571 aa		5.09	□□□□□ -1.6
DOT6	YER088C	YLR271W	Q06152	274 aa		5.08	□□□□□ -1.6
DOT6	YER088C	BCH2	P36122	765 aa		5.07	□□□□□ -1.6
DOT6	YER088C	YIL055C	P40523	627 aa	Known RBP	5.07	□□□□□ -1.6
DOT6	YER088C	YAH1	Q12184	172 aa	Known RBP	5.07	□□□□□ -1.6
DOT6	YER088C	YGL015C	P33199	130 aa		5.05	□□□□□ -1.6
DOT6	YER088C	RSM7	P47150	247 aa		5.04	□□□□□ -1.6
DOT6	YER088C	UBP10	P53874	792 aa	Predicted RBP	5.02	□□□□□ -1.61
DOT6	YER088C	MAP2	P38174	421 aa	Known RBP	5.02	□□□□□ -1.61
DOT6	YER088C	AI2	P03876	854 aa		4.97	□□□□□ -1.61
DOT6	YER088C	SCY1	P53009	804 aa		4.97	□□□□□ -1.61
DOT6	YER088C	EPS1	P40557	701 aa		4.96	□□□□□ -1.62
DOT6	YER088C	PSD2	P53037	1138 aa	Known RBP	4.96	□□□□□ -1.62
DOT6	YER088C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
DOT6	YER088C	BDF1	P35817	686 aa		4.94	□□□□□ -1.62
DOT6	YER088C	MGA2	P40578	1113 aa		4.92	□□□□□ -1.62
DOT6	YER088C	CST9	Q06032	482 aa		4.92	□□□□□ -1.62
DOT6	YER088C	BBC1	P47068	1157 aa		4.9	□□□□□ -1.63
DOT6	YER088C	SLX5	P32828	619 aa	Known RBP	4.87	□□□□□ -1.63
DOT6	YER088C	MRM1	P25270	412 aa		4.8	□□□□□ -1.64
DOT6	YER088C	TGL3	P40308	642 aa		4.78	□□□□□ -1.64
DOT6	YER088C	RCR1	P38212	213 aa		4.77	□□□□□ -1.65
DOT6	YER088C	BUD31	P25337	157 aa	Predicted RBP	4.77	□□□□□ -1.65
DOT6	YER088C	TIF4632	P39936	914 aa	Known RBP	4.77	□□□□□ -1.65
DOT6	YER088C	DMA1	P38823	416 aa		4.74	□□□□□ -1.65
DOT6	YER088C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
DOT6	YER088C	RTG3	P38165	486 aa		4.73	□□□□□ -1.65
DOT6	YER088C	VPS29	P38759	282 aa		4.73	□□□□□ -1.65
DOT6	YER088C	RAM2	P29703	316 aa		4.73	□□□□□ -1.65
DOT6	YER088C	RQC2	Q12532	1038 aa	Known RBP	4.71	□□□□□ -1.66
DOT6	YER088C	MST1	P07236	462 aa		4.68	□□□□□ -1.66
DOT6	YER088C	STS1	P38637	319 aa		4.67	□□□□□ -1.66
DOT6	YER088C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
DOT6	YER088C	YAP5	P40574	245 aa		4.65	□□□□□ -1.66
DOT6	YER088C	MAK11	P20484	414 aa	Known RBP	4.65	□□□□□ -1.67
DOT6	YER088C	YOR238W	Q08634	303 aa		4.64	□□□□□ -1.67
DOT6	YER088C	DBP1	P24784	617 aa	Known RBP	4.63	□□□□□ -1.67
DOT6	YER088C	YFR006W	P43590	535 aa		4.61	□□□□□ -1.67
DOT6	YER088C	PIB1	Q06651	286 aa		4.59	□□□□□ -1.67
DOT6	YER088C	SAS10	Q12136	610 aa	Predicted RBP	4.58	□□□□□ -1.68
DOT6	YER088C	EDS1	P38073	919 aa		4.58	□□□□□ -1.68
DOT6	YER088C	COQ8	P27697	501 aa		4.57	□□□□□ -1.68
DOT6	YER088C	SET1	P38827	1080 aa	Known RBP	4.57	□□□□□ -1.68
DOT6	YER088C	VMA1	P17255	1071 aa	Known RBP	4.56	□□□□□ -1.68
DOT6	YER088C	SAM3	Q08986	587 aa		4.54	□□□□□ -1.68
DOT6	YER088C	YPR148C	Q06523	435 aa		4.53	□□□□□ -1.68
DOT6	YER088C	NOP53	Q12080	455 aa	Known RBP	4.53	□□□□□ -1.68
DOT6	YER088C	MIF2	P35201	549 aa		4.53	□□□□□ -1.68
DOT6	YER088C	PTC3	P34221	468 aa	Known RBP	4.52	□□□□□ -1.69
DOT6	YER088C	SIS1	P25294	352 aa	Known RBP	4.5	□□□□□ -1.69
DOT6	YER088C	YOL036W	Q08206	761 aa		4.48	□□□□□ -1.69
DOT6	YER088C	YBL029C-A	Q3E756	94 aa		4.48	□□□□□ -1.69
DOT6	YER088C	GTT3	P39996	337 aa		4.48	□□□□□ -1.69
DOT6	YER088C	IFH1	P39520	1085 aa		4.47	□□□□□ -1.69
DOT6	YER088C	UBP9	P39967	754 aa		4.47	□□□□□ -1.69
DOT6	YER088C	VNX1	P42839	908 aa		4.47	□□□□□ -1.69
DOT6	YER088C	MSB4	Q12317	492 aa		4.46	□□□□□ -1.7
DOT6	YER088C	NST1	P53935	1240 aa		4.45	□□□□□ -1.7
DOT6	YER088C	GUT1	P32190	709 aa		4.45	□□□□□ -1.7
DOT6	YER088C	SET4	P42948	560 aa		4.45	□□□□□ -1.7
DOT6	YER088C	GRE2	Q12068	342 aa	Known RBP	4.45	□□□□□ -1.7
DOT6	YER088C	WSC3	Q12215	556 aa		4.45	□□□□□ -1.7
DOT6	YER088C	GYP5	Q12344	894 aa		4.45	□□□□□ -1.7
DOT6	YER088C	SOL3	P38858	249 aa		4.44	□□□□□ -1.7
DOT6	YER088C	VPS70	P47161	811 aa		4.44	□□□□□ -1.7
DOT6	YER088C	ABP1	P15891	592 aa	Known RBP	4.42	□□□□□ -1.7
DOT6	YER088C	ATH1	P48016	1211 aa		4.42	□□□□□ -1.7
DOT6	YER088C	TIF11	P38912	153 aa	Known RBP	4.41	□□□□□ -1.7
DOT6	YER088C	CKB1	P43639	278 aa		4.41	□□□□□ -1.7
DOT6	YER088C	IOC2	Q12072	812 aa		4.41	□□□□□ -1.7
DOT6	YER088C	DCW1	P36091	449 aa		4.4	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms