RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeastyeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF1YDR477W SGS1P35187 1447 aa16.69■□□□□ 0.26
SNF1YDR477W SPA2P23201 1466 aaKnown RBP16.49■□□□□ 0.23
SNF1YDR477W SSN2P38931 1420 aa16.31■□□□□ 0.2
SNF1YDR477W INO80P53115 1489 aa16.12■□□□□ 0.17
SNF1YDR477W DRS1P32892 752 aaKnown RBP15.74■□□□□ 0.11
SNF1YDR477W TCB3Q03640 1545 aaKnown RBP15.65■□□□□ 0.1
SNF1YDR477W TY1B-DR4Q07793 1604 aa15.48■□□□□ 0.07
SNF1YDR477W HSL1P34244 1518 aa15.34■□□□□ 0.05
SNF1YDR477W SKI3P17883 1432 aaKnown RBP15.31■□□□□ 0.04
SNF1YDR477W SPT6P23615 1451 aaKnown RBP15.24■□□□□ 0.03
SNF1YDR477W HIR3P47171 1648 aa15.11■□□□□ 0.01
SNF1YDR477W XRN1P22147 1528 aaKnown RBP15.1■□□□□ 0.01
SNF1YDR477W CHD1P32657 1468 aa14.97□□□□□ -0.01
SNF1YDR477W MMS22Q06164 1454 aa14.97□□□□□ -0.01
SNF1YDR477W REV3P14284 1504 aa14.95□□□□□ -0.02
SNF1YDR477W THO2P53552 1597 aaKnown RBP14.9□□□□□ -0.02
SNF1YDR477W SIN3P22579 1536 aa14.87□□□□□ -0.03
SNF1YDR477W SSK2P53599 1579 aa14.84□□□□□ -0.03
SNF1YDR477W SWR1Q05471 1514 aa14.79□□□□□ -0.04
SNF1YDR477W TAF2P23255 1407 aa14.74□□□□□ -0.05
SNF1YDR477W MON2P48563 1636 aaPredicted RBP14.74□□□□□ -0.05
SNF1YDR477W ESP1Q03018 1630 aa14.67□□□□□ -0.06
SNF1YDR477W MYO2P19524 1574 aaKnown RBP14.64□□□□□ -0.07
SNF1YDR477W STU1P38198 1513 aa14.61□□□□□ -0.07
SNF1YDR477W RSE1Q04693 1361 aaKnown RBP14.59□□□□□ -0.07
SNF1YDR477W UFD4P33202 1483 aa14.58□□□□□ -0.08
SNF1YDR477W POL1P13382 1468 aa14.58□□□□□ -0.08
SNF1YDR477W BPT1P14772 1559 aa14.5□□□□□ -0.09
SNF1YDR477W TRM732Q03496 1420 aa14.49□□□□□ -0.09
SNF1YDR477W YTA7P40340 1379 aa14.47□□□□□ -0.09
SNF1YDR477W SAS10Q12136 610 aaPredicted RBP14.45□□□□□ -0.1
SNF1YDR477W NSR1P27476 414 aaKnown RBP RIP-Chip data14.45□□□□□ -0.1not detected
SNF1YDR477W YPK9Q12697 1472 aa14.38□□□□□ -0.11
SNF1YDR477W SCC2Q04002 1493 aa14.38□□□□□ -0.11
SNF1YDR477W NOP2P40991 618 aaKnown RBP14.37□□□□□ -0.11
SNF1YDR477W ATG2P53855 1592 aa14.36□□□□□ -0.11
SNF1YDR477W ECM5Q03214 1411 aa14.35□□□□□ -0.11
SNF1YDR477W BUD4P47136 1447 aa14.35□□□□□ -0.11
SNF1YDR477W IKI3Q06706 1349 aaKnown RBP14.34□□□□□ -0.11
SNF1YDR477W RKR1Q04781 1562 aa14.31□□□□□ -0.12
SNF1YDR477W DNA2P38859 1522 aa14.3□□□□□ -0.12
SNF1YDR477W YOR1P53049 1477 aa14.3□□□□□ -0.12
SNF1YDR477W MYO4P32492 1471 aa14.28□□□□□ -0.12
SNF1YDR477W SPP41P38904 1435 aa14.23□□□□□ -0.13
SNF1YDR477W NUP170P38181 1502 aa14.22□□□□□ -0.13
SNF1YDR477W SSM4P40318 1319 aa14.18□□□□□ -0.14
SNF1YDR477W SNQ2P32568 1501 aaKnown RBP14.15□□□□□ -0.14
SNF1YDR477W RPO31P04051 1460 aa14.12□□□□□ -0.15
SNF1YDR477W SMC4Q12267 1418 aa14.11□□□□□ -0.15
SNF1YDR477W PEP1P32319 1579 aa14.09□□□□□ -0.15
SNF1YDR477W TOP2P06786 1428 aaKnown RBP14.09□□□□□ -0.15
SNF1YDR477W STH1P32597 1359 aa14.08□□□□□ -0.16
SNF1YDR477W MLP2P40457 1679 aa14.06□□□□□ -0.16
SNF1YDR477W TAF7Q05021 590 aa14.05□□□□□ -0.16
SNF1YDR477W KOG1P38873 1557 aa14.04□□□□□ -0.16
SNF1YDR477W YCF1P39109 1515 aaKnown RBP14.03□□□□□ -0.16
SNF1YDR477W TY1B-DR3Q99231 1755 aa14.03□□□□□ -0.16
SNF1YDR477W TY2B-LR1P0C2J3 1770 aa14.02□□□□□ -0.17
SNF1YDR477W TY2B-FP0CX63 1770 aa14.02□□□□□ -0.17
SNF1YDR477W TY2B-GR2P0CX64 1770 aa14.02□□□□□ -0.17
SNF1YDR477W TY2B-CP25384 1770 aa14.02□□□□□ -0.17
SNF1YDR477W TY2B-DR2Q03494 1770 aa14.02□□□□□ -0.17
SNF1YDR477W TY1B-DR1Q03855 1755 aa14.02□□□□□ -0.17
SNF1YDR477W TY2B-DR3Q07791 1770 aaKnown RBP14.02□□□□□ -0.17
SNF1YDR477W TY2B-OR1Q12113 1770 aa14.02□□□□□ -0.17
SNF1YDR477W TY2B-DR1Q12472 1770 aa14.02□□□□□ -0.17
SNF1YDR477W TY2B-OR2Q12501 1770 aa14.02□□□□□ -0.17
SNF1YDR477W PDR15Q04182 1529 aaKnown RBP14□□□□□ -0.17
SNF1YDR477W GEA1P47102 1408 aaPredicted RBP13.97□□□□□ -0.17
SNF1YDR477W MDS3P53094 1487 aa13.97□□□□□ -0.17
SNF1YDR477W ULS1Q08562 1619 aa13.93□□□□□ -0.18
SNF1YDR477W PAN1P32521 1480 aa13.92□□□□□ -0.18
SNF1YDR477W IFH1P39520 1085 aa13.92□□□□□ -0.18
SNF1YDR477W TY2B-BQ12491 1770 aa13.91□□□□□ -0.18
SNF1YDR477W TSC11P40061 1430 aa13.9□□□□□ -0.18
SNF1YDR477W ENP1P38333 483 aaKnown RBP13.9□□□□□ -0.18
SNF1YDR477W POL5P39985 1022 aaKnown RBP13.9□□□□□ -0.18
SNF1YDR477W TY3B-GQ99315 1547 aa13.84□□□□□ -0.19
SNF1YDR477W RTT106P40161 455 aa13.81□□□□□ -0.2
SNF1YDR477W SPT7P35177 1332 aa13.77□□□□□ -0.2
SNF1YDR477W PDR10P51533 1564 aa13.76□□□□□ -0.21
SNF1YDR477W TY1B-HO13535 1793 aa13.76□□□□□ -0.21
SNF1YDR477W TY1B-DR5P0C2I2 1755 aa13.76□□□□□ -0.21
SNF1YDR477W TY1B-DR6P0C2I3 1755 aa13.76□□□□□ -0.21
SNF1YDR477W TY1B-LR2P0C2I5 1755 aa13.76□□□□□ -0.21
SNF1YDR477W TY1B-LR3P0C2I6 1755 aaKnown RBP13.76□□□□□ -0.21
SNF1YDR477W TY1B-PR1P0C2I9 1755 aaKnown RBP13.76□□□□□ -0.21
SNF1YDR477W TY1B-PR2P0C2J0 1756 aa13.76□□□□□ -0.21
SNF1YDR477W TY1B-PR3P0C2J1 1755 aaKnown RBP13.76□□□□□ -0.21
SNF1YDR477W TY1B-JR1P47098 1755 aa13.76□□□□□ -0.21
SNF1YDR477W TY1B-ML2Q03434 1755 aaKnown RBP13.76□□□□□ -0.21
SNF1YDR477W TY1B-ER1Q03612 1755 aa13.76□□□□□ -0.21
SNF1YDR477W TY1B-ML1Q04711 1755 aaKnown RBP13.76□□□□□ -0.21
SNF1YDR477W TY1B-GR2Q12269 1755 aa13.76□□□□□ -0.21
SNF1YDR477W TY1B-OLQ12273 1755 aa13.76□□□□□ -0.21
SNF1YDR477W TY1B-PLQ12414 1755 aaKnown RBP13.76□□□□□ -0.21
SNF1YDR477W VPS15P22219 1454 aa13.71□□□□□ -0.21
SNF1YDR477W TY1B-BRQ12193 1756 aa13.69□□□□□ -0.22
SNF1YDR477W TY1B-GR3Q12316 1755 aa13.69□□□□□ -0.22
SNF1YDR477W TY1B-ORQ92393 1755 aa13.69□□□□□ -0.22
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms