RNA–Protein interactions for RNA: YDR346C

SVF1, Transcript of Protein with a potential role in cell survival pathways, yeastyeast

Gene SVF1, Length 1,446 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SVF1YDR346C DRS1P32892 752 aaKnown RBP17.82■□□□□ 0.44
SVF1YDR346C MTC1P47018 478 aaKnown RBP17.7■□□□□ 0.42
SVF1YDR346C BFR2Q06631 534 aaKnown RBP15.41■□□□□ 0.06
SVF1YDR346C DIP2Q12220 943 aaPredicted RBP15.16■□□□□ 0.02
SVF1YDR346C AVT3P36062 692 aa14.94□□□□□ -0.02
SVF1YDR346C FAP1P53971 965 aa14.58□□□□□ -0.07
SVF1YDR346C TFA1P36100 482 aa14.44□□□□□ -0.1
SVF1YDR346C ISW2Q08773 1120 aa14.38□□□□□ -0.11
SVF1YDR346C RSE1Q04693 1361 aaKnown RBP14.28□□□□□ -0.12
SVF1YDR346C RPG1P38249 964 aaKnown RBP14.24□□□□□ -0.13
SVF1YDR346C PRI1P10363 409 aa14.21□□□□□ -0.13
SVF1YDR346C AAD16Q02895 342 aa13.97□□□□□ -0.17
SVF1YDR346C RPL17AP05740 184 aaKnown RBP13.79□□□□□ -0.2
SVF1YDR346C RPL17BP46990 184 aaKnown RBP13.79□□□□□ -0.2
SVF1YDR346C PRY3P47033 881 aa13.65□□□□□ -0.22
SVF1YDR346C REB1P21538 810 aa13.61□□□□□ -0.23
SVF1YDR346C TSR3Q12094 313 aaKnown RBP13.56□□□□□ -0.24
SVF1YDR346C SPT21P35209 758 aa13.24□□□□□ -0.29
SVF1YDR346C RIM101P33400 625 aa13.05□□□□□ -0.32
SVF1YDR346C MRPL32P25348 183 aa12.97□□□□□ -0.33
SVF1YDR346C YCK3P39962 524 aa12.91□□□□□ -0.34
SVF1YDR346C YKR023WP36119 530 aaKnown RBP12.84□□□□□ -0.35
SVF1YDR346C HAA1Q12753 694 aaKnown RBP12.79□□□□□ -0.36
SVF1YDR346C PTP3P40048 928 aa12.7□□□□□ -0.38
SVF1YDR346C OXP1P28273 1286 aa12.69□□□□□ -0.38
SVF1YDR346C HOP09932 586 aa12.62□□□□□ -0.39
SVF1YDR346C CDC27P38042 758 aa12.59□□□□□ -0.39
SVF1YDR346C TFC8Q12308 588 aa12.57□□□□□ -0.4
SVF1YDR346C DCD1P06773 312 aa12.56□□□□□ -0.4
SVF1YDR346C YAH1Q12184 172 aaKnown RBP12.55□□□□□ -0.4
SVF1YDR346C YIL055CP40523 627 aaKnown RBP12.5□□□□□ -0.41
SVF1YDR346C SSP1P38871 571 aa12.48□□□□□ -0.41
SVF1YDR346C YLR271WQ06152 274 aa12.34□□□□□ -0.43
SVF1YDR346C RSM7P47150 247 aa12.28□□□□□ -0.44
SVF1YDR346C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.26□□□□□ -0.45not detected
SVF1YDR346C BCH2P36122 765 aa12.22□□□□□ -0.45
SVF1YDR346C RQC2Q12532 1038 aaKnown RBP12.15□□□□□ -0.46
SVF1YDR346C AI2P03876 854 aa12.09□□□□□ -0.47
SVF1YDR346C YGL015CP33199 130 aa12.05□□□□□ -0.48
SVF1YDR346C MAP2P38174 421 aaKnown RBP12.04□□□□□ -0.48
SVF1YDR346C SCY1P53009 804 aa12.03□□□□□ -0.48
SVF1YDR346C MGA2P40578 1113 aa12.03□□□□□ -0.48
SVF1YDR346C EPS1P40557 701 aa12.01□□□□□ -0.49
SVF1YDR346C CST9Q06032 482 aa12□□□□□ -0.49
SVF1YDR346C BBC1P47068 1157 aa11.98□□□□□ -0.49
SVF1YDR346C PSD2P53037 1138 aaKnown RBP11.98□□□□□ -0.49
SVF1YDR346C DMA1P38823 416 aa11.97□□□□□ -0.49
SVF1YDR346C UBP10P53874 792 aaPredicted RBP11.97□□□□□ -0.49
SVF1YDR346C BDF1P35817 686 aa11.92□□□□□ -0.5
SVF1YDR346C SLX5P32828 619 aaKnown RBP11.77□□□□□ -0.53
SVF1YDR346C MRM1P25270 412 aa11.75□□□□□ -0.53
SVF1YDR346C RCR1P38212 213 aa11.6□□□□□ -0.55
SVF1YDR346C RTG3P38165 486 aa11.53□□□□□ -0.56
SVF1YDR346C RAM2P29703 316 aa11.52□□□□□ -0.56
SVF1YDR346C TIF4632P39936 914 aaKnown RBP11.5□□□□□ -0.57
SVF1YDR346C VPS29P38759 282 aa11.43□□□□□ -0.58
SVF1YDR346C TGL3P40308 642 aa11.4□□□□□ -0.58
SVF1YDR346C YMR1P47147 688 aaKnown RBP RIP-Chip data11.31□□□□□ -0.6not detected
SVF1YDR346C MAK11P20484 414 aaKnown RBP11.3□□□□□ -0.6
SVF1YDR346C STS1P38637 319 aa11.29□□□□□ -0.6
SVF1YDR346C YFR006WP43590 535 aa11.29□□□□□ -0.6
SVF1YDR346C DBP1P24784 617 aaKnown RBP11.27□□□□□ -0.6
SVF1YDR346C YOR238WQ08634 303 aa11.27□□□□□ -0.6
SVF1YDR346C SET1P38827 1080 aaKnown RBP11.26□□□□□ -0.61
SVF1YDR346C PIB1Q06651 286 aa11.26□□□□□ -0.61
SVF1YDR346C YAP5P40574 245 aa11.24□□□□□ -0.61
SVF1YDR346C NSR1P27476 414 aaKnown RBP RIP-Chip data11.23□□□□□ -0.61not detected
SVF1YDR346C SAS10Q12136 610 aaPredicted RBP11.23□□□□□ -0.61
SVF1YDR346C COQ8P27697 501 aa11.17□□□□□ -0.62
SVF1YDR346C MIF2P35201 549 aa11.16□□□□□ -0.62
SVF1YDR346C EDS1P38073 919 aa11.09□□□□□ -0.63
SVF1YDR346C MST1P07236 462 aa11.05□□□□□ -0.64
SVF1YDR346C VPS70P47161 811 aa11.05□□□□□ -0.64
SVF1YDR346C VMA1P17255 1071 aaKnown RBP11.03□□□□□ -0.64
SVF1YDR346C YPR148CQ06523 435 aa11.03□□□□□ -0.64
SVF1YDR346C IFH1P39520 1085 aa11□□□□□ -0.65
SVF1YDR346C PTC3P34221 468 aaKnown RBP10.99□□□□□ -0.65
SVF1YDR346C GTT3P39996 337 aa10.97□□□□□ -0.65
SVF1YDR346C NOP53Q12080 455 aaKnown RBP10.95□□□□□ -0.66
SVF1YDR346C CKB1P43639 278 aa10.9□□□□□ -0.66
SVF1YDR346C SAM3Q08986 587 aa10.88□□□□□ -0.67
SVF1YDR346C SPB4P25808 606 aaPredicted RBP10.86□□□□□ -0.67
SVF1YDR346C GRE2Q12068 342 aaKnown RBP10.85□□□□□ -0.67
SVF1YDR346C ATH1P48016 1211 aa10.84□□□□□ -0.67
SVF1YDR346C WSC3Q12215 556 aa10.84□□□□□ -0.67
SVF1YDR346C GYP5Q12344 894 aa10.83□□□□□ -0.68
SVF1YDR346C LEU3P08638 886 aa10.82□□□□□ -0.68
SVF1YDR346C SET4P42948 560 aa10.82□□□□□ -0.68
SVF1YDR346C YOL036WQ08206 761 aa10.82□□□□□ -0.68
SVF1YDR346C GUT1P32190 709 aa10.78□□□□□ -0.68
SVF1YDR346C YBL029C-AQ3E756 94 aa10.77□□□□□ -0.68
SVF1YDR346C PBS2P08018 668 aa10.76□□□□□ -0.69
SVF1YDR346C DCW1P36091 449 aa10.76□□□□□ -0.69
SVF1YDR346C REF2P42073 533 aaPredicted RBP10.76□□□□□ -0.69
SVF1YDR346C VHR2P40041 505 aa10.7□□□□□ -0.7
SVF1YDR346C DSF2P38213 736 aa10.69□□□□□ -0.7
SVF1YDR346C LEO1P38439 464 aa10.69□□□□□ -0.7
SVF1YDR346C SOL3P38858 249 aa10.69□□□□□ -0.7
SVF1YDR346C MSB4Q12317 492 aa10.69□□□□□ -0.7
SVF1YDR346C VNX1P42839 908 aa10.68□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms