RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C FAP1P53971 965 aa6.52□□□□□ -1.37
SWI5YDR146C MTC1P47018 478 aaKnown RBP6.26□□□□□ -1.41
SWI5YDR146C DRS1P32892 752 aaKnown RBP6.2□□□□□ -1.42
SWI5YDR146C PRY3P47033 881 aa6.17□□□□□ -1.42
SWI5YDR146C HAA1Q12753 694 aaKnown RBP5.68□□□□□ -1.5
SWI5YDR146C YCK3P39962 524 aa5.66□□□□□ -1.5
SWI5YDR146C AAD16Q02895 342 aa5.48□□□□□ -1.53
SWI5YDR146C BFR2Q06631 534 aaKnown RBP5.33□□□□□ -1.56
SWI5YDR146C PRI1P10363 409 aa5.31□□□□□ -1.56
SWI5YDR146C DIP2Q12220 943 aaPredicted RBP5.3□□□□□ -1.56
SWI5YDR146C AVT3P36062 692 aa5.27□□□□□ -1.57
SWI5YDR146C BUD31P25337 157 aaPredicted RBP5.18□□□□□ -1.58
SWI5YDR146C ISW2Q08773 1120 aa5.06□□□□□ -1.6
SWI5YDR146C TFA1P36100 482 aa5.05□□□□□ -1.6
SWI5YDR146C RSE1Q04693 1361 aaKnown RBP5.01□□□□□ -1.61
SWI5YDR146C YGL015CP33199 130 aa5□□□□□ -1.61
SWI5YDR146C RPG1P38249 964 aaKnown RBP5□□□□□ -1.61
SWI5YDR146C TSR3Q12094 313 aaKnown RBP4.97□□□□□ -1.61
SWI5YDR146C SIS1P25294 352 aaKnown RBP4.85□□□□□ -1.63
SWI5YDR146C MRPL32P25348 183 aa4.85□□□□□ -1.63
SWI5YDR146C RPL17AP05740 184 aaKnown RBP4.82□□□□□ -1.64
SWI5YDR146C RPL17BP46990 184 aaKnown RBP4.82□□□□□ -1.64
SWI5YDR146C REB1P21538 810 aa4.73□□□□□ -1.65
SWI5YDR146C SPT21P35209 758 aa4.72□□□□□ -1.65
SWI5YDR146C RIM101P33400 625 aa4.63□□□□□ -1.67
SWI5YDR146C YKR023WP36119 530 aaKnown RBP4.55□□□□□ -1.68
SWI5YDR146C UBP9P39967 754 aa4.53□□□□□ -1.68
SWI5YDR146C OXP1P28273 1286 aa4.48□□□□□ -1.69
SWI5YDR146C CDC27P38042 758 aa4.46□□□□□ -1.7
SWI5YDR146C TFC8Q12308 588 aa4.45□□□□□ -1.7
SWI5YDR146C HOP09932 586 aa4.41□□□□□ -1.7
SWI5YDR146C UBP10P53874 792 aaPredicted RBP4.4□□□□□ -1.7
SWI5YDR146C DCD1P06773 312 aa4.39□□□□□ -1.71
SWI5YDR146C SSP1P38871 571 aa4.36□□□□□ -1.71
SWI5YDR146C PTP3P40048 928 aa4.36□□□□□ -1.71
SWI5YDR146C MAP2P38174 421 aaKnown RBP4.34□□□□□ -1.71
SWI5YDR146C YLR271WQ06152 274 aa4.33□□□□□ -1.72
SWI5YDR146C YIL055CP40523 627 aaKnown RBP4.33□□□□□ -1.72
SWI5YDR146C YAH1Q12184 172 aaKnown RBP4.33□□□□□ -1.72
SWI5YDR146C BCH2P36122 765 aa4.31□□□□□ -1.72
SWI5YDR146C RSM7P47150 247 aa4.31□□□□□ -1.72
SWI5YDR146C TIF4632P39936 914 aaKnown RBP4.3□□□□□ -1.72
SWI5YDR146C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
SWI5YDR146C PSD2P53037 1138 aaKnown RBP4.25□□□□□ -1.73
SWI5YDR146C AI2P03876 854 aa4.24□□□□□ -1.73
SWI5YDR146C EPS1P40557 701 aa4.23□□□□□ -1.73
SWI5YDR146C SCY1P53009 804 aa4.22□□□□□ -1.73
SWI5YDR146C MGA2P40578 1113 aa4.22□□□□□ -1.73
SWI5YDR146C TGL3P40308 642 aa4.21□□□□□ -1.74
SWI5YDR146C BDF1P35817 686 aa4.21□□□□□ -1.74
SWI5YDR146C CST9Q06032 482 aa4.2□□□□□ -1.74
SWI5YDR146C BBC1P47068 1157 aa4.19□□□□□ -1.74
SWI5YDR146C SLX5P32828 619 aaKnown RBP4.16□□□□□ -1.74
SWI5YDR146C RQC2Q12532 1038 aaKnown RBP4.13□□□□□ -1.75
SWI5YDR146C MRM1P25270 412 aa4.1□□□□□ -1.75
SWI5YDR146C DMA1P38823 416 aa4.1□□□□□ -1.75
SWI5YDR146C RCR1P38212 213 aa4.07□□□□□ -1.76
SWI5YDR146C NSR1P27476 414 aaKnown RBP RIP-Chip data4.06□□□□□ -1.76not detected
SWI5YDR146C RAM2P29703 316 aa4.06□□□□□ -1.76
SWI5YDR146C YJL171CP46992 396 aa4.05□□□□□ -1.76
SWI5YDR146C RTG3P38165 486 aa4.04□□□□□ -1.76
SWI5YDR146C VPS29P38759 282 aa4.04□□□□□ -1.76
SWI5YDR146C RGA2Q06407 1009 aa4.02□□□□□ -1.77
SWI5YDR146C YBL029C-AQ3E756 94 aa4.01□□□□□ -1.77
SWI5YDR146C MAK11P20484 414 aaKnown RBP3.98□□□□□ -1.77
SWI5YDR146C STS1P38637 319 aa3.98□□□□□ -1.77
SWI5YDR146C YMR1P47147 688 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
SWI5YDR146C MST1P07236 462 aa3.98□□□□□ -1.77
SWI5YDR146C YAP5P40574 245 aa3.97□□□□□ -1.77
SWI5YDR146C YOR238WQ08634 303 aa3.97□□□□□ -1.77
SWI5YDR146C SAS10Q12136 610 aaPredicted RBP3.97□□□□□ -1.77
SWI5YDR146C DBP1P24784 617 aaKnown RBP3.95□□□□□ -1.78
SWI5YDR146C SPP1Q03012 353 aa3.94□□□□□ -1.78
SWI5YDR146C YFR006WP43590 535 aa3.93□□□□□ -1.78
SWI5YDR146C YPR148CQ06523 435 aa3.92□□□□□ -1.78
SWI5YDR146C AIR2Q12476 344 aaKnown RBP3.92□□□□□ -1.78
SWI5YDR146C COQ8P27697 501 aa3.92□□□□□ -1.78
SWI5YDR146C EDS1P38073 919 aa3.92□□□□□ -1.78
SWI5YDR146C SET1P38827 1080 aaKnown RBP3.92□□□□□ -1.78
SWI5YDR146C VNX1P42839 908 aa3.91□□□□□ -1.78
SWI5YDR146C NOP53Q12080 455 aaKnown RBP3.91□□□□□ -1.78
SWI5YDR146C VMA1P17255 1071 aaKnown RBP3.9□□□□□ -1.79
SWI5YDR146C PIB1Q06651 286 aa3.89□□□□□ -1.79
SWI5YDR146C SAM3Q08986 587 aa3.89□□□□□ -1.79
SWI5YDR146C PTC3P34221 468 aaKnown RBP3.87□□□□□ -1.79
SWI5YDR146C MIF2P35201 549 aa3.86□□□□□ -1.79
SWI5YDR146C IFH1P39520 1085 aa3.86□□□□□ -1.79
SWI5YDR146C WSC3Q12215 556 aa3.86□□□□□ -1.79
SWI5YDR146C FKH1P40466 484 aa3.84□□□□□ -1.79
SWI5YDR146C BMT6Q12291 365 aa3.84□□□□□ -1.79
SWI5YDR146C GTT3P39996 337 aa3.82□□□□□ -1.8
SWI5YDR146C YOL036WQ08206 761 aa3.82□□□□□ -1.8
SWI5YDR146C VPS70P47161 811 aa3.82□□□□□ -1.8
SWI5YDR146C TIF11P38912 153 aaKnown RBP3.81□□□□□ -1.8
SWI5YDR146C CKB1P43639 278 aa3.81□□□□□ -1.8
SWI5YDR146C MSB4Q12317 492 aa3.81□□□□□ -1.8
SWI5YDR146C GUT1P32190 709 aa3.8□□□□□ -1.8
SWI5YDR146C NST1P53935 1240 aa3.8□□□□□ -1.8
SWI5YDR146C GRE2Q12068 342 aaKnown RBP3.8□□□□□ -1.8
SWI5YDR146C LEU3P08638 886 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms