RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W MTC1P47018 478 aaKnown RBP12.57□□□□□ -0.4
YCL020WYCL020W DRS1P32892 752 aaKnown RBP12.42□□□□□ -0.42
YCL020WYCL020W FAP1P53971 965 aa12.11□□□□□ -0.47
YCL020WYCL020W PRY3P47033 881 aa11.44□□□□□ -0.58
YCL020WYCL020W AAD16Q02895 342 aa10.9□□□□□ -0.66
YCL020WYCL020W PRI1P10363 409 aa10.83□□□□□ -0.68
YCL020WYCL020W YCK3P39962 524 aa10.79□□□□□ -0.68
YCL020WYCL020W HAA1Q12753 694 aaKnown RBP10.75□□□□□ -0.69
YCL020WYCL020W DIP2Q12220 943 aaPredicted RBP10.65□□□□□ -0.7
YCL020WYCL020W BFR2Q06631 534 aaKnown RBP10.61□□□□□ -0.71
YCL020WYCL020W AVT3P36062 692 aa10.43□□□□□ -0.74
YCL020WYCL020W ISW2Q08773 1120 aa10.24□□□□□ -0.77
YCL020WYCL020W RPG1P38249 964 aaKnown RBP10.21□□□□□ -0.78
YCL020WYCL020W TSR3Q12094 313 aaKnown RBP10.1□□□□□ -0.79
YCL020WYCL020W RSE1Q04693 1361 aaKnown RBP10.08□□□□□ -0.8
YCL020WYCL020W RPL17AP05740 184 aaKnown RBP9.78□□□□□ -0.84
YCL020WYCL020W RPL17BP46990 184 aaKnown RBP9.78□□□□□ -0.84
YCL020WYCL020W MRPL32P25348 183 aa9.76□□□□□ -0.85
YCL020WYCL020W TFA1P36100 482 aa9.75□□□□□ -0.85
YCL020WYCL020W YGL015CP33199 130 aa9.71□□□□□ -0.86
YCL020WYCL020W REB1P21538 810 aa9.64□□□□□ -0.87
YCL020WYCL020W BUD31P25337 157 aaPredicted RBP9.46□□□□□ -0.9
YCL020WYCL020W SPT21P35209 758 aa9.39□□□□□ -0.91
YCL020WYCL020W YKR023WP36119 530 aaKnown RBP9.17□□□□□ -0.94
YCL020WYCL020W RIM101P33400 625 aa9.16□□□□□ -0.94
YCL020WYCL020W CDC27P38042 758 aa9.07□□□□□ -0.96
YCL020WYCL020W DCD1P06773 312 aa9.04□□□□□ -0.96
YCL020WYCL020W HOP09932 586 aa9.04□□□□□ -0.96
YCL020WYCL020W UBP10P53874 792 aaPredicted RBP9.02□□□□□ -0.97
YCL020WYCL020W OXP1P28273 1286 aa8.95□□□□□ -0.98
YCL020WYCL020W TFC8Q12308 588 aa8.95□□□□□ -0.98
YCL020WYCL020W MAP2P38174 421 aaKnown RBP8.89□□□□□ -0.99
YCL020WYCL020W SIS1P25294 352 aaKnown RBP8.84□□□□□ -0.99
YCL020WYCL020W YAH1Q12184 172 aaKnown RBP8.82□□□□□ -1
YCL020WYCL020W PTP3P40048 928 aa8.8□□□□□ -1
YCL020WYCL020W UBP9P39967 754 aa8.73□□□□□ -1.01
YCL020WYCL020W YIL055CP40523 627 aaKnown RBP8.73□□□□□ -1.01
YCL020WYCL020W BCH2P36122 765 aa8.7□□□□□ -1.02
YCL020WYCL020W YLR271WQ06152 274 aa8.64□□□□□ -1.03
YCL020WYCL020W TIF4632P39936 914 aaKnown RBP8.63□□□□□ -1.03
YCL020WYCL020W TGL3P40308 642 aa8.63□□□□□ -1.03
YCL020WYCL020W SCY1P53009 804 aa8.63□□□□□ -1.03
YCL020WYCL020W SSP1P38871 571 aa8.62□□□□□ -1.03
YCL020WYCL020W RSM7P47150 247 aa8.61□□□□□ -1.03
YCL020WYCL020W EPS1P40557 701 aa8.53□□□□□ -1.04
YCL020WYCL020W AI2P03876 854 aa8.51□□□□□ -1.05
YCL020WYCL020W SLX5P32828 619 aaKnown RBP8.49□□□□□ -1.05
YCL020WYCL020W BDF1P35817 686 aa8.47□□□□□ -1.05
YCL020WYCL020W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
YCL020WYCL020W BBC1P47068 1157 aa8.4□□□□□ -1.06
YCL020WYCL020W PSD2P53037 1138 aaKnown RBP8.4□□□□□ -1.06
YCL020WYCL020W CST9Q06032 482 aa8.4□□□□□ -1.06
YCL020WYCL020W MGA2P40578 1113 aa8.33□□□□□ -1.08
YCL020WYCL020W MRM1P25270 412 aa8.27□□□□□ -1.09
YCL020WYCL020W RCR1P38212 213 aa8.17□□□□□ -1.1
YCL020WYCL020W MST1P07236 462 aa8.15□□□□□ -1.1
YCL020WYCL020W YBL029C-AQ3E756 94 aa8.13□□□□□ -1.11
YCL020WYCL020W RTG3P38165 486 aa8.05□□□□□ -1.12
YCL020WYCL020W VPS29P38759 282 aa8.04□□□□□ -1.12
YCL020WYCL020W PIB1Q06651 286 aa8.04□□□□□ -1.12
YCL020WYCL020W YOR238WQ08634 303 aa8.03□□□□□ -1.12
YCL020WYCL020W RAM2P29703 316 aa8.02□□□□□ -1.13
YCL020WYCL020W DMA1P38823 416 aa8.02□□□□□ -1.13
YCL020WYCL020W VNX1P42839 908 aa8.02□□□□□ -1.13
YCL020WYCL020W YFR006WP43590 535 aa8.01□□□□□ -1.13
YCL020WYCL020W STS1P38637 319 aa7.97□□□□□ -1.13
YCL020WYCL020W YAP5P40574 245 aa7.96□□□□□ -1.14
YCL020WYCL020W NSR1P27476 414 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
YCL020WYCL020W DBP1P24784 617 aaKnown RBP7.94□□□□□ -1.14
YCL020WYCL020W YMR1P47147 688 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
YCL020WYCL020W SPP1Q03012 353 aa7.94□□□□□ -1.14
YCL020WYCL020W AIR2Q12476 344 aaKnown RBP7.93□□□□□ -1.14
YCL020WYCL020W YJL171CP46992 396 aa7.9□□□□□ -1.14
YCL020WYCL020W FKH1P40466 484 aa7.88□□□□□ -1.15
YCL020WYCL020W MAK11P20484 414 aaKnown RBP7.82□□□□□ -1.16
YCL020WYCL020W TIF11P38912 153 aaKnown RBP7.79□□□□□ -1.16
YCL020WYCL020W WSC3Q12215 556 aa7.79□□□□□ -1.16
YCL020WYCL020W VMA1P17255 1071 aaKnown RBP7.78□□□□□ -1.16
YCL020WYCL020W MIF2P35201 549 aa7.78□□□□□ -1.16
YCL020WYCL020W EDS1P38073 919 aa7.78□□□□□ -1.16
YCL020WYCL020W GTT3P39996 337 aa7.78□□□□□ -1.16
YCL020WYCL020W RQC2Q12532 1038 aaKnown RBP7.78□□□□□ -1.16
YCL020WYCL020W COQ8P27697 501 aa7.77□□□□□ -1.17
YCL020WYCL020W SET1P38827 1080 aaKnown RBP7.73□□□□□ -1.17
YCL020WYCL020W BMT6Q12291 365 aa7.71□□□□□ -1.18
YCL020WYCL020W SET4P42948 560 aa7.69□□□□□ -1.18
YCL020WYCL020W YOL036WQ08206 761 aa7.68□□□□□ -1.18
YCL020WYCL020W PTC3P34221 468 aaKnown RBP7.67□□□□□ -1.18
YCL020WYCL020W LDB19Q12502 818 aa7.66□□□□□ -1.18
YCL020WYCL020W SAM3Q08986 587 aa7.65□□□□□ -1.18
YCL020WYCL020W IOC2Q12072 812 aa7.62□□□□□ -1.19
YCL020WYCL020W GYP5Q12344 894 aa7.62□□□□□ -1.19
YCL020WYCL020W DCW1P36091 449 aa7.6□□□□□ -1.19
YCL020WYCL020W ULI1P43604 169 aa7.6□□□□□ -1.19
YCL020WYCL020W GRE2Q12068 342 aaKnown RBP7.59□□□□□ -1.19
YCL020WYCL020W ATH1P48016 1211 aa7.57□□□□□ -1.2
YCL020WYCL020W VPS70P47161 811 aa7.56□□□□□ -1.2
YCL020WYCL020W TRP5P00931 707 aaKnown RBP7.54□□□□□ -1.2
YCL020WYCL020W SAS10Q12136 610 aaPredicted RBP7.54□□□□□ -1.2
YCL020WYCL020W MSB4Q12317 492 aa7.53□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms