RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A DRS1P32892 752 aaKnown RBP7.1□□□□□ -1.27
VMA9YCL005W-A MTC1P47018 478 aaKnown RBP7.07□□□□□ -1.28
VMA9YCL005W-A BFR2Q06631 534 aaKnown RBP6.12□□□□□ -1.43
VMA9YCL005W-A DIP2Q12220 943 aaPredicted RBP6.04□□□□□ -1.44
VMA9YCL005W-A AVT3P36062 692 aa5.98□□□□□ -1.45
VMA9YCL005W-A FAP1P53971 965 aa5.84□□□□□ -1.47
VMA9YCL005W-A TFA1P36100 482 aa5.71□□□□□ -1.5
VMA9YCL005W-A RPG1P38249 964 aaKnown RBP5.71□□□□□ -1.5
VMA9YCL005W-A ISW2Q08773 1120 aa5.71□□□□□ -1.5
VMA9YCL005W-A PRI1P10363 409 aa5.7□□□□□ -1.5
VMA9YCL005W-A RSE1Q04693 1361 aaKnown RBP5.68□□□□□ -1.5
VMA9YCL005W-A AAD16Q02895 342 aa5.58□□□□□ -1.52
VMA9YCL005W-A RPL17AP05740 184 aaKnown RBP5.52□□□□□ -1.53
VMA9YCL005W-A RPL17BP46990 184 aaKnown RBP5.52□□□□□ -1.53
VMA9YCL005W-A PRY3P47033 881 aa5.5□□□□□ -1.53
VMA9YCL005W-A TSR3Q12094 313 aaKnown RBP5.47□□□□□ -1.53
VMA9YCL005W-A REB1P21538 810 aa5.41□□□□□ -1.54
VMA9YCL005W-A SPT21P35209 758 aa5.33□□□□□ -1.56
VMA9YCL005W-A YCK3P39962 524 aa5.29□□□□□ -1.56
VMA9YCL005W-A RIM101P33400 625 aa5.22□□□□□ -1.57
VMA9YCL005W-A MRPL32P25348 183 aa5.17□□□□□ -1.58
VMA9YCL005W-A YKR023WP36119 530 aaKnown RBP5.17□□□□□ -1.58
VMA9YCL005W-A OXP1P28273 1286 aa5.1□□□□□ -1.59
VMA9YCL005W-A HAA1Q12753 694 aaKnown RBP5.1□□□□□ -1.59
VMA9YCL005W-A DCD1P06773 312 aa5.09□□□□□ -1.59
VMA9YCL005W-A CDC27P38042 758 aa5.09□□□□□ -1.59
VMA9YCL005W-A HOP09932 586 aa5.08□□□□□ -1.6
VMA9YCL005W-A PTP3P40048 928 aa5.06□□□□□ -1.6
VMA9YCL005W-A TFC8Q12308 588 aa5.03□□□□□ -1.6
VMA9YCL005W-A YAH1Q12184 172 aaKnown RBP5.02□□□□□ -1.61
VMA9YCL005W-A SSP1P38871 571 aa4.95□□□□□ -1.62
VMA9YCL005W-A YIL055CP40523 627 aaKnown RBP4.94□□□□□ -1.62
VMA9YCL005W-A YLR271WQ06152 274 aa4.94□□□□□ -1.62
VMA9YCL005W-A BCH2P36122 765 aa4.9□□□□□ -1.63
VMA9YCL005W-A RSM7P47150 247 aa4.89□□□□□ -1.63
VMA9YCL005W-A MAP2P38174 421 aaKnown RBP4.85□□□□□ -1.63
VMA9YCL005W-A AI2P03876 854 aa4.83□□□□□ -1.64
VMA9YCL005W-A SCY1P53009 804 aa4.83□□□□□ -1.64
VMA9YCL005W-A CST9Q06032 482 aa4.82□□□□□ -1.64
VMA9YCL005W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
VMA9YCL005W-A EPS1P40557 701 aa4.81□□□□□ -1.64
VMA9YCL005W-A YGL015CP33199 130 aa4.79□□□□□ -1.64
VMA9YCL005W-A PSD2P53037 1138 aaKnown RBP4.79□□□□□ -1.64
VMA9YCL005W-A BDF1P35817 686 aa4.77□□□□□ -1.65
VMA9YCL005W-A MGA2P40578 1113 aa4.76□□□□□ -1.65
VMA9YCL005W-A UBP10P53874 792 aaPredicted RBP4.76□□□□□ -1.65
VMA9YCL005W-A DMA1P38823 416 aa4.74□□□□□ -1.65
VMA9YCL005W-A BBC1P47068 1157 aa4.73□□□□□ -1.65
VMA9YCL005W-A MRM1P25270 412 aa4.7□□□□□ -1.66
VMA9YCL005W-A SLX5P32828 619 aaKnown RBP4.69□□□□□ -1.66
VMA9YCL005W-A RCR1P38212 213 aa4.67□□□□□ -1.66
VMA9YCL005W-A RQC2Q12532 1038 aaKnown RBP4.64□□□□□ -1.67
VMA9YCL005W-A RAM2P29703 316 aa4.62□□□□□ -1.67
VMA9YCL005W-A VPS29P38759 282 aa4.58□□□□□ -1.68
VMA9YCL005W-A RTG3P38165 486 aa4.57□□□□□ -1.68
VMA9YCL005W-A YFR006WP43590 535 aa4.54□□□□□ -1.68
VMA9YCL005W-A STS1P38637 319 aa4.53□□□□□ -1.68
VMA9YCL005W-A TIF4632P39936 914 aaKnown RBP4.53□□□□□ -1.68
VMA9YCL005W-A TGL3P40308 642 aa4.53□□□□□ -1.68
VMA9YCL005W-A PIB1Q06651 286 aa4.53□□□□□ -1.68
VMA9YCL005W-A DBP1P24784 617 aaKnown RBP4.49□□□□□ -1.69
VMA9YCL005W-A YMR1P47147 688 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
VMA9YCL005W-A YOR238WQ08634 303 aa4.49□□□□□ -1.69
VMA9YCL005W-A MAK11P20484 414 aaKnown RBP4.48□□□□□ -1.69
VMA9YCL005W-A EDS1P38073 919 aa4.46□□□□□ -1.7
VMA9YCL005W-A SET1P38827 1080 aaKnown RBP4.46□□□□□ -1.7
VMA9YCL005W-A NSR1P27476 414 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
VMA9YCL005W-A YAP5P40574 245 aa4.45□□□□□ -1.7
VMA9YCL005W-A COQ8P27697 501 aa4.44□□□□□ -1.7
VMA9YCL005W-A SAS10Q12136 610 aaPredicted RBP4.43□□□□□ -1.7
VMA9YCL005W-A MIF2P35201 549 aa4.42□□□□□ -1.7
VMA9YCL005W-A VMA1P17255 1071 aaKnown RBP4.41□□□□□ -1.7
VMA9YCL005W-A MST1P07236 462 aa4.4□□□□□ -1.71
VMA9YCL005W-A VPS70P47161 811 aa4.38□□□□□ -1.71
VMA9YCL005W-A PTC3P34221 468 aaKnown RBP4.37□□□□□ -1.71
VMA9YCL005W-A YPR148CQ06523 435 aa4.37□□□□□ -1.71
VMA9YCL005W-A GTT3P39996 337 aa4.34□□□□□ -1.71
VMA9YCL005W-A WSC3Q12215 556 aa4.34□□□□□ -1.71
VMA9YCL005W-A YOL036WQ08206 761 aa4.33□□□□□ -1.72
VMA9YCL005W-A SAM3Q08986 587 aa4.33□□□□□ -1.72
VMA9YCL005W-A SET4P42948 560 aa4.32□□□□□ -1.72
VMA9YCL005W-A YBL029C-AQ3E756 94 aa4.32□□□□□ -1.72
VMA9YCL005W-A SOL3P38858 249 aa4.3□□□□□ -1.72
VMA9YCL005W-A GRE2Q12068 342 aaKnown RBP4.3□□□□□ -1.72
VMA9YCL005W-A GYP5Q12344 894 aa4.3□□□□□ -1.72
VMA9YCL005W-A DCW1P36091 449 aa4.29□□□□□ -1.72
VMA9YCL005W-A IFH1P39520 1085 aa4.28□□□□□ -1.72
VMA9YCL005W-A ATH1P48016 1211 aa4.28□□□□□ -1.72
VMA9YCL005W-A NOP53Q12080 455 aaKnown RBP4.28□□□□□ -1.72
VMA9YCL005W-A VHR2P40041 505 aa4.27□□□□□ -1.73
VMA9YCL005W-A VNX1P42839 908 aa4.27□□□□□ -1.73
VMA9YCL005W-A NST1P53935 1240 aa4.27□□□□□ -1.73
VMA9YCL005W-A GUT1P32190 709 aa4.26□□□□□ -1.73
VMA9YCL005W-A ILV3P39522 585 aaKnown RBP4.26□□□□□ -1.73
VMA9YCL005W-A PBS2P08018 668 aa4.25□□□□□ -1.73
VMA9YCL005W-A SPB4P25808 606 aaPredicted RBP4.25□□□□□ -1.73
VMA9YCL005W-A CKB1P43639 278 aa4.25□□□□□ -1.73
VMA9YCL005W-A YGR273CP53329 174 aa4.25□□□□□ -1.73
VMA9YCL005W-A LEU3P08638 886 aa4.24□□□□□ -1.73
VMA9YCL005W-A UBP14P38237 781 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms