RNA–Protein interactions for RNA: YBR035C

PDX3, Transcript of Pyridoxine (pyridoxamine) phosphate oxidase, yeastyeast

Gene PDX3, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX3YBR035C DRS1P32892 752 aaKnown RBP11.18□□□□□ -0.62
PDX3YBR035C MTC1P47018 478 aaKnown RBP10.27□□□□□ -0.77
PDX3YBR035C BFR2Q06631 534 aaKnown RBP10.05□□□□□ -0.8
PDX3YBR035C TFA1P36100 482 aa10.02□□□□□ -0.81
PDX3YBR035C RQC2Q12532 1038 aaKnown RBP9.43□□□□□ -0.9
PDX3YBR035C AVT3P36062 692 aa9.32□□□□□ -0.92
PDX3YBR035C DIP2Q12220 943 aaPredicted RBP9.23□□□□□ -0.93
PDX3YBR035C FAP1P53971 965 aa9.1□□□□□ -0.95
PDX3YBR035C TAF7Q05021 590 aa8.73□□□□□ -1.01
PDX3YBR035C INO80P53115 1489 aa8.6□□□□□ -1.03
PDX3YBR035C MON2P48563 1636 aaPredicted RBP8.59□□□□□ -1.03
PDX3YBR035C DMA1P38823 416 aa8.58□□□□□ -1.04
PDX3YBR035C PRI1P10363 409 aa8.51□□□□□ -1.05
PDX3YBR035C PRY3P47033 881 aa8.51□□□□□ -1.05
PDX3YBR035C RSE1Q04693 1361 aaKnown RBP8.48□□□□□ -1.05
PDX3YBR035C ISW2Q08773 1120 aa8.48□□□□□ -1.05
PDX3YBR035C AAD16Q02895 342 aa8.47□□□□□ -1.05
PDX3YBR035C RPG1P38249 964 aaKnown RBP8.31□□□□□ -1.08
PDX3YBR035C LEO1P38439 464 aa8.27□□□□□ -1.09
PDX3YBR035C PTP3P40048 928 aa8.22□□□□□ -1.09
PDX3YBR035C DNA2P38859 1522 aa8.15□□□□□ -1.1
PDX3YBR035C RPL17AP05740 184 aaKnown RBP8.12□□□□□ -1.11
PDX3YBR035C RPL17BP46990 184 aaKnown RBP8.12□□□□□ -1.11
PDX3YBR035C SWR1Q05471 1514 aa8.11□□□□□ -1.11
PDX3YBR035C SGS1P35187 1447 aa8.11□□□□□ -1.11
PDX3YBR035C KOG1P38873 1557 aa8.1□□□□□ -1.11
PDX3YBR035C TCB3Q03640 1545 aaKnown RBP8.08□□□□□ -1.12
PDX3YBR035C TY1B-DR4Q07793 1604 aa8.08□□□□□ -1.12
PDX3YBR035C TSR3Q12094 313 aaKnown RBP8.03□□□□□ -1.12
PDX3YBR035C HAA1Q12753 694 aaKnown RBP8.03□□□□□ -1.12
PDX3YBR035C SSP1P38871 571 aa7.98□□□□□ -1.13
PDX3YBR035C REB1P21538 810 aa7.95□□□□□ -1.14
PDX3YBR035C RIM101P33400 625 aa7.94□□□□□ -1.14
PDX3YBR035C LEU3P08638 886 aa7.91□□□□□ -1.14
PDX3YBR035C YCK3P39962 524 aa7.87□□□□□ -1.15
PDX3YBR035C SPT21P35209 758 aa7.86□□□□□ -1.15
PDX3YBR035C HSL1P34244 1518 aa7.85□□□□□ -1.15
PDX3YBR035C SAS10Q12136 610 aaPredicted RBP7.83□□□□□ -1.16
PDX3YBR035C MRPL32P25348 183 aa7.8□□□□□ -1.16
PDX3YBR035C SPT6P23615 1451 aaKnown RBP7.8□□□□□ -1.16
PDX3YBR035C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
PDX3YBR035C YAH1Q12184 172 aaKnown RBP7.74□□□□□ -1.17
PDX3YBR035C OXP1P28273 1286 aa7.72□□□□□ -1.17
PDX3YBR035C SPA2P23201 1466 aaKnown RBP7.71□□□□□ -1.18
PDX3YBR035C HIR3P47171 1648 aa7.67□□□□□ -1.18
PDX3YBR035C YLR271WQ06152 274 aa7.65□□□□□ -1.18
PDX3YBR035C SSN2P38931 1420 aa7.64□□□□□ -1.19
PDX3YBR035C RPN1P38764 993 aaKnown RBP7.64□□□□□ -1.19
PDX3YBR035C YIL055CP40523 627 aaKnown RBP7.64□□□□□ -1.19
PDX3YBR035C DMA2P53924 522 aa7.64□□□□□ -1.19
PDX3YBR035C MGA2P40578 1113 aa7.6□□□□□ -1.19
PDX3YBR035C ECM5Q03214 1411 aa7.56□□□□□ -1.2
PDX3YBR035C THO2P53552 1597 aaKnown RBP7.55□□□□□ -1.2
PDX3YBR035C XRN1P22147 1528 aaKnown RBP7.55□□□□□ -1.2
PDX3YBR035C BUD4P47136 1447 aa7.53□□□□□ -1.2
PDX3YBR035C RSM7P47150 247 aa7.5□□□□□ -1.21
PDX3YBR035C RLF2Q12495 606 aa7.49□□□□□ -1.21
PDX3YBR035C YGL015CP33199 130 aa7.46□□□□□ -1.22
PDX3YBR035C CST9Q06032 482 aa7.46□□□□□ -1.22
PDX3YBR035C REV3P14284 1504 aa7.46□□□□□ -1.22
PDX3YBR035C MDS3P53094 1487 aa7.45□□□□□ -1.22
PDX3YBR035C SPB4P25808 606 aaPredicted RBP7.45□□□□□ -1.22
PDX3YBR035C ABP1P15891 592 aaKnown RBP7.42□□□□□ -1.22
PDX3YBR035C YKR023WP36119 530 aaKnown RBP7.42□□□□□ -1.22
PDX3YBR035C CKB1P43639 278 aa7.42□□□□□ -1.22
PDX3YBR035C SIN3P22579 1536 aa7.41□□□□□ -1.22
PDX3YBR035C ATG2P53855 1592 aa7.41□□□□□ -1.22
PDX3YBR035C PEP1P32319 1579 aa7.38□□□□□ -1.23
PDX3YBR035C PSD2P53037 1138 aaKnown RBP7.36□□□□□ -1.23
PDX3YBR035C SSK2P53599 1579 aa7.36□□□□□ -1.23
PDX3YBR035C SET1P38827 1080 aaKnown RBP7.35□□□□□ -1.23
PDX3YBR035C VPS70P47161 811 aa7.35□□□□□ -1.23
PDX3YBR035C YPR148CQ06523 435 aa7.33□□□□□ -1.24
PDX3YBR035C BPT1P14772 1559 aa7.31□□□□□ -1.24
PDX3YBR035C RAM2P29703 316 aa7.31□□□□□ -1.24
PDX3YBR035C CDC27P38042 758 aa7.31□□□□□ -1.24
PDX3YBR035C ESP1Q03018 1630 aa7.3□□□□□ -1.24
PDX3YBR035C TAF2P23255 1407 aa7.3□□□□□ -1.24
PDX3YBR035C AI2P03876 854 aa7.3□□□□□ -1.24
PDX3YBR035C IFH1P39520 1085 aa7.3□□□□□ -1.24
PDX3YBR035C HOP09932 586 aa7.28□□□□□ -1.24
PDX3YBR035C TFC8Q12308 588 aa7.27□□□□□ -1.25
PDX3YBR035C KIN1P13185 1064 aa7.24□□□□□ -1.25
PDX3YBR035C DSF2P38213 736 aa7.24□□□□□ -1.25
PDX3YBR035C HGH1P48362 394 aaKnown RBP7.24□□□□□ -1.25
PDX3YBR035C SKI3P17883 1432 aaKnown RBP7.24□□□□□ -1.25
PDX3YBR035C MYO2P19524 1574 aaKnown RBP7.23□□□□□ -1.25
PDX3YBR035C BBC1P47068 1157 aa7.22□□□□□ -1.25
PDX3YBR035C YNR021WP53723 404 aaKnown RBP7.21□□□□□ -1.26
PDX3YBR035C UBP10P53874 792 aaPredicted RBP7.21□□□□□ -1.26
PDX3YBR035C PBS2P08018 668 aa7.2□□□□□ -1.26
PDX3YBR035C DCD1P06773 312 aa7.19□□□□□ -1.26
PDX3YBR035C YPK9Q12697 1472 aa7.17□□□□□ -1.26
PDX3YBR035C YCF1P39109 1515 aaKnown RBP7.17□□□□□ -1.26
PDX3YBR035C SCC2Q04002 1493 aa7.15□□□□□ -1.27
PDX3YBR035C AIM7Q12156 149 aa7.14□□□□□ -1.27
PDX3YBR035C MRM1P25270 412 aa7.13□□□□□ -1.27
PDX3YBR035C GLC3P32775 704 aa7.13□□□□□ -1.27
PDX3YBR035C RCR1P38212 213 aa7.13□□□□□ -1.27
PDX3YBR035C MAK11P20484 414 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms