RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeastyeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKM3YBR030W MTC1P47018 478 aaKnown RBP11.66□□□□□ -0.54
RKM3YBR030W DRS1P32892 752 aaKnown RBP11.14□□□□□ -0.63
RKM3YBR030W FAP1P53971 965 aa10.15□□□□□ -0.78
RKM3YBR030W PRI1P10363 409 aa9.69□□□□□ -0.86
RKM3YBR030W DIP2Q12220 943 aaPredicted RBP9.66□□□□□ -0.86
RKM3YBR030W PRY3P47033 881 aa9.57□□□□□ -0.88
RKM3YBR030W AAD16Q02895 342 aa9.55□□□□□ -0.88
RKM3YBR030W BFR2Q06631 534 aaKnown RBP9.54□□□□□ -0.88
RKM3YBR030W ISW2Q08773 1120 aa9.51□□□□□ -0.89
RKM3YBR030W RPG1P38249 964 aaKnown RBP9.49□□□□□ -0.89
RKM3YBR030W AVT3P36062 692 aa9.43□□□□□ -0.9
RKM3YBR030W TFA1P36100 482 aa9.42□□□□□ -0.9
RKM3YBR030W YCK3P39962 524 aa9.23□□□□□ -0.93
RKM3YBR030W RSE1Q04693 1361 aaKnown RBP9.23□□□□□ -0.93
RKM3YBR030W TSR3Q12094 313 aaKnown RBP9.2□□□□□ -0.94
RKM3YBR030W RPL17AP05740 184 aaKnown RBP8.97□□□□□ -0.97
RKM3YBR030W RPL17BP46990 184 aaKnown RBP8.97□□□□□ -0.97
RKM3YBR030W HAA1Q12753 694 aaKnown RBP8.91□□□□□ -0.98
RKM3YBR030W REB1P21538 810 aa8.84□□□□□ -0.99
RKM3YBR030W RQC2Q12532 1038 aaKnown RBP8.72□□□□□ -1.01
RKM3YBR030W MRPL32P25348 183 aa8.72□□□□□ -1.01
RKM3YBR030W SPT21P35209 758 aa8.67□□□□□ -1.02
RKM3YBR030W YKR023WP36119 530 aaKnown RBP8.52□□□□□ -1.05
RKM3YBR030W CDC27P38042 758 aa8.49□□□□□ -1.05
RKM3YBR030W RIM101P33400 625 aa8.37□□□□□ -1.07
RKM3YBR030W DCD1P06773 312 aa8.34□□□□□ -1.08
RKM3YBR030W HOP09932 586 aa8.34□□□□□ -1.08
RKM3YBR030W TFC8Q12308 588 aa8.3□□□□□ -1.08
RKM3YBR030W YGL015CP33199 130 aa8.27□□□□□ -1.09
RKM3YBR030W OXP1P28273 1286 aa8.16□□□□□ -1.1
RKM3YBR030W MAP2P38174 421 aaKnown RBP8.15□□□□□ -1.1
RKM3YBR030W TAF7Q05021 590 aa8.14□□□□□ -1.11
RKM3YBR030W UBP10P53874 792 aaPredicted RBP8.08□□□□□ -1.12
RKM3YBR030W DMA1P38823 416 aa8.07□□□□□ -1.12
RKM3YBR030W BCH2P36122 765 aa8.05□□□□□ -1.12
RKM3YBR030W SCY1P53009 804 aa8.01□□□□□ -1.13
RKM3YBR030W PTP3P40048 928 aa7.91□□□□□ -1.14
RKM3YBR030W YAH1Q12184 172 aaKnown RBP7.9□□□□□ -1.14
RKM3YBR030W YIL055CP40523 627 aaKnown RBP7.87□□□□□ -1.15
RKM3YBR030W EPS1P40557 701 aa7.86□□□□□ -1.15
RKM3YBR030W SLX5P32828 619 aaKnown RBP7.83□□□□□ -1.16
RKM3YBR030W BDF1P35817 686 aa7.82□□□□□ -1.16
RKM3YBR030W RSM7P47150 247 aa7.82□□□□□ -1.16
RKM3YBR030W YLR271WQ06152 274 aa7.81□□□□□ -1.16
RKM3YBR030W AI2P03876 854 aa7.75□□□□□ -1.17
RKM3YBR030W LEO1P38439 464 aa7.73□□□□□ -1.17
RKM3YBR030W SSP1P38871 571 aa7.7□□□□□ -1.18
RKM3YBR030W TIF4632P39936 914 aaKnown RBP7.68□□□□□ -1.18
RKM3YBR030W TGL3P40308 642 aa7.68□□□□□ -1.18
RKM3YBR030W PSD2P53037 1138 aaKnown RBP7.66□□□□□ -1.18
RKM3YBR030W BBC1P47068 1157 aa7.65□□□□□ -1.18
RKM3YBR030W CST9Q06032 482 aa7.57□□□□□ -1.2
RKM3YBR030W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
RKM3YBR030W BUD31P25337 157 aaPredicted RBP7.53□□□□□ -1.2
RKM3YBR030W MRM1P25270 412 aa7.5□□□□□ -1.21
RKM3YBR030W MGA2P40578 1113 aa7.47□□□□□ -1.21
RKM3YBR030W NSR1P27476 414 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
RKM3YBR030W MST1P07236 462 aa7.44□□□□□ -1.22
RKM3YBR030W LEU3P08638 886 aa7.43□□□□□ -1.22
RKM3YBR030W RCR1P38212 213 aa7.41□□□□□ -1.22
RKM3YBR030W SAS10Q12136 610 aaPredicted RBP7.39□□□□□ -1.23
RKM3YBR030W YOR238WQ08634 303 aa7.38□□□□□ -1.23
RKM3YBR030W YAP5P40574 245 aa7.38□□□□□ -1.23
RKM3YBR030W PIB1Q06651 286 aa7.36□□□□□ -1.23
RKM3YBR030W VPS29P38759 282 aa7.35□□□□□ -1.23
RKM3YBR030W YBL029C-AQ3E756 94 aa7.32□□□□□ -1.24
RKM3YBR030W RTG3P38165 486 aa7.29□□□□□ -1.24
RKM3YBR030W STS1P38637 319 aa7.29□□□□□ -1.24
RKM3YBR030W UBP9P39967 754 aa7.29□□□□□ -1.24
RKM3YBR030W YFR006WP43590 535 aa7.27□□□□□ -1.25
RKM3YBR030W DBP1P24784 617 aaKnown RBP7.25□□□□□ -1.25
RKM3YBR030W YMR1P47147 688 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25not detected
RKM3YBR030W VNX1P42839 908 aa7.22□□□□□ -1.25
RKM3YBR030W WSC3Q12215 556 aa7.22□□□□□ -1.25
RKM3YBR030W RAM2P29703 316 aa7.2□□□□□ -1.26
RKM3YBR030W DMA2P53924 522 aa7.18□□□□□ -1.26
RKM3YBR030W GTT3P39996 337 aa7.17□□□□□ -1.26
RKM3YBR030W VMA1P17255 1071 aaKnown RBP7.15□□□□□ -1.27
RKM3YBR030W SIS1P25294 352 aaKnown RBP7.14□□□□□ -1.27
RKM3YBR030W RPN1P38764 993 aaKnown RBP7.14□□□□□ -1.27
RKM3YBR030W SPP1Q03012 353 aa7.11□□□□□ -1.27
RKM3YBR030W YOL036WQ08206 761 aa7.1□□□□□ -1.27
RKM3YBR030W SET4P42948 560 aa7.09□□□□□ -1.27
RKM3YBR030W TIF11P38912 153 aaKnown RBP7.08□□□□□ -1.28
RKM3YBR030W SAM3Q08986 587 aa7.08□□□□□ -1.28
RKM3YBR030W ABP1P15891 592 aaKnown RBP7.07□□□□□ -1.28
RKM3YBR030W MAK11P20484 414 aaKnown RBP7.06□□□□□ -1.28
RKM3YBR030W EDS1P38073 919 aa7.06□□□□□ -1.28
RKM3YBR030W IOC2Q12072 812 aa7.04□□□□□ -1.28
RKM3YBR030W ULI1P43604 169 aa7.03□□□□□ -1.28
RKM3YBR030W MSB4Q12317 492 aa7.02□□□□□ -1.29
RKM3YBR030W LDB19Q12502 818 aa7□□□□□ -1.29
RKM3YBR030W MIF2P35201 549 aa7□□□□□ -1.29
RKM3YBR030W RLF2Q12495 606 aa7□□□□□ -1.29
RKM3YBR030W TRP5P00931 707 aaKnown RBP6.99□□□□□ -1.29
RKM3YBR030W COQ8P27697 501 aa6.99□□□□□ -1.29
RKM3YBR030W FKH1P40466 484 aa6.99□□□□□ -1.29
RKM3YBR030W SET1P38827 1080 aaKnown RBP6.98□□□□□ -1.29
RKM3YBR030W AIR2Q12476 344 aaKnown RBP6.97□□□□□ -1.29
RKM3YBR030W CKB1P43639 278 aa6.96□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms