RNA–Protein interactions for RNA: YBR009C

HHF1, Transcript of Histone H4, yeastyeast

Gene HHF1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HHF1YBR009C MTC1P47018 478 aaKnown RBP8.33□□□□□ -1.08
HHF1YBR009C DRS1P32892 752 aaKnown RBP8.2□□□□□ -1.1
HHF1YBR009C FAP1P53971 965 aa8.17□□□□□ -1.1
HHF1YBR009C PRY3P47033 881 aa7.73□□□□□ -1.17
HHF1YBR009C YCK3P39962 524 aa7.37□□□□□ -1.23
HHF1YBR009C AAD16Q02895 342 aa7.29□□□□□ -1.24
HHF1YBR009C HAA1Q12753 694 aaKnown RBP7.24□□□□□ -1.25
HHF1YBR009C PRI1P10363 409 aa7.21□□□□□ -1.26
HHF1YBR009C DIP2Q12220 943 aaPredicted RBP7.04□□□□□ -1.28
HHF1YBR009C BFR2Q06631 534 aaKnown RBP7□□□□□ -1.29
HHF1YBR009C TFA1P36100 482 aa6.94□□□□□ -1.3
HHF1YBR009C AVT3P36062 692 aa6.88□□□□□ -1.31
HHF1YBR009C ISW2Q08773 1120 aa6.82□□□□□ -1.32
HHF1YBR009C RPG1P38249 964 aaKnown RBP6.76□□□□□ -1.33
HHF1YBR009C TSR3Q12094 313 aaKnown RBP6.72□□□□□ -1.33
HHF1YBR009C RSE1Q04693 1361 aaKnown RBP6.69□□□□□ -1.34
HHF1YBR009C RQC2Q12532 1038 aaKnown RBP6.55□□□□□ -1.36
HHF1YBR009C YGL015CP33199 130 aa6.51□□□□□ -1.37
HHF1YBR009C MRPL32P25348 183 aa6.47□□□□□ -1.37
HHF1YBR009C RPL17AP05740 184 aaKnown RBP6.46□□□□□ -1.38
HHF1YBR009C RPL17BP46990 184 aaKnown RBP6.46□□□□□ -1.38
HHF1YBR009C BUD31P25337 157 aaPredicted RBP6.45□□□□□ -1.38
HHF1YBR009C REB1P21538 810 aa6.4□□□□□ -1.38
HHF1YBR009C TAF7Q05021 590 aa6.22□□□□□ -1.41
HHF1YBR009C SPT21P35209 758 aa6.18□□□□□ -1.42
HHF1YBR009C RIM101P33400 625 aa6.07□□□□□ -1.44
HHF1YBR009C YKR023WP36119 530 aaKnown RBP6.05□□□□□ -1.44
HHF1YBR009C SIS1P25294 352 aaKnown RBP6□□□□□ -1.45
HHF1YBR009C DMA1P38823 416 aa6□□□□□ -1.45
HHF1YBR009C CDC27P38042 758 aa5.99□□□□□ -1.45
HHF1YBR009C UBP10P53874 792 aaPredicted RBP5.96□□□□□ -1.46
HHF1YBR009C HOP09932 586 aa5.94□□□□□ -1.46
HHF1YBR009C TFC8Q12308 588 aa5.93□□□□□ -1.46
HHF1YBR009C DCD1P06773 312 aa5.9□□□□□ -1.46
HHF1YBR009C MAP2P38174 421 aaKnown RBP5.9□□□□□ -1.46
HHF1YBR009C OXP1P28273 1286 aa5.89□□□□□ -1.47
HHF1YBR009C UBP9P39967 754 aa5.83□□□□□ -1.48
HHF1YBR009C YIL055CP40523 627 aaKnown RBP5.82□□□□□ -1.48
HHF1YBR009C LEO1P38439 464 aa5.79□□□□□ -1.48
HHF1YBR009C PTP3P40048 928 aa5.78□□□□□ -1.48
HHF1YBR009C YAH1Q12184 172 aaKnown RBP5.78□□□□□ -1.48
HHF1YBR009C BCH2P36122 765 aa5.75□□□□□ -1.49
HHF1YBR009C SSP1P38871 571 aa5.72□□□□□ -1.49
HHF1YBR009C TGL3P40308 642 aa5.72□□□□□ -1.49
HHF1YBR009C RSM7P47150 247 aa5.71□□□□□ -1.5
HHF1YBR009C TIF4632P39936 914 aaKnown RBP5.7□□□□□ -1.5
HHF1YBR009C SCY1P53009 804 aa5.69□□□□□ -1.5
HHF1YBR009C YLR271WQ06152 274 aa5.69□□□□□ -1.5
HHF1YBR009C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
HHF1YBR009C AI2P03876 854 aa5.63□□□□□ -1.51
HHF1YBR009C EPS1P40557 701 aa5.63□□□□□ -1.51
HHF1YBR009C BDF1P35817 686 aa5.6□□□□□ -1.51
HHF1YBR009C BBC1P47068 1157 aa5.6□□□□□ -1.51
HHF1YBR009C SLX5P32828 619 aaKnown RBP5.59□□□□□ -1.51
HHF1YBR009C PSD2P53037 1138 aaKnown RBP5.55□□□□□ -1.52
HHF1YBR009C MGA2P40578 1113 aa5.53□□□□□ -1.52
HHF1YBR009C LEU3P08638 886 aa5.51□□□□□ -1.53
HHF1YBR009C CST9Q06032 482 aa5.51□□□□□ -1.53
HHF1YBR009C MRM1P25270 412 aa5.45□□□□□ -1.54
HHF1YBR009C SAS10Q12136 610 aaPredicted RBP5.43□□□□□ -1.54
HHF1YBR009C MST1P07236 462 aa5.4□□□□□ -1.54
HHF1YBR009C YBL029C-AQ3E756 94 aa5.4□□□□□ -1.54
HHF1YBR009C DMA2P53924 522 aa5.38□□□□□ -1.55
HHF1YBR009C RTG3P38165 486 aa5.35□□□□□ -1.55
HHF1YBR009C RCR1P38212 213 aa5.35□□□□□ -1.55
HHF1YBR009C VNX1P42839 908 aa5.33□□□□□ -1.56
HHF1YBR009C VPS29P38759 282 aa5.32□□□□□ -1.56
HHF1YBR009C NSR1P27476 414 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56 RIP-Chip
HHF1YBR009C YAP5P40574 245 aa5.31□□□□□ -1.56
HHF1YBR009C ABP1P15891 592 aaKnown RBP5.3□□□□□ -1.56
HHF1YBR009C RPN1P38764 993 aaKnown RBP5.3□□□□□ -1.56
HHF1YBR009C YOR238WQ08634 303 aa5.3□□□□□ -1.56
HHF1YBR009C AIR2Q12476 344 aaKnown RBP5.3□□□□□ -1.56
HHF1YBR009C RAM2P29703 316 aa5.28□□□□□ -1.56
HHF1YBR009C YMR1P47147 688 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
HHF1YBR009C PIB1Q06651 286 aa5.27□□□□□ -1.57
HHF1YBR009C DBP1P24784 617 aaKnown RBP5.26□□□□□ -1.57
HHF1YBR009C YFR006WP43590 535 aa5.26□□□□□ -1.57
HHF1YBR009C YJL171CP46992 396 aa5.25□□□□□ -1.57
HHF1YBR009C STS1P38637 319 aa5.24□□□□□ -1.57
HHF1YBR009C FKH1P40466 484 aa5.24□□□□□ -1.57
HHF1YBR009C RLF2Q12495 606 aa5.24□□□□□ -1.57
HHF1YBR009C SPP1Q03012 353 aa5.23□□□□□ -1.57
HHF1YBR009C MAK11P20484 414 aaKnown RBP5.21□□□□□ -1.58
HHF1YBR009C GTT3P39996 337 aa5.18□□□□□ -1.58
HHF1YBR009C VMA1P17255 1071 aaKnown RBP5.16□□□□□ -1.58
HHF1YBR009C MIF2P35201 549 aa5.15□□□□□ -1.59
HHF1YBR009C CKB1P43639 278 aa5.15□□□□□ -1.59
HHF1YBR009C WSC3Q12215 556 aa5.15□□□□□ -1.59
HHF1YBR009C COQ8P27697 501 aa5.14□□□□□ -1.59
HHF1YBR009C TIF11P38912 153 aaKnown RBP5.14□□□□□ -1.59
HHF1YBR009C IFH1P39520 1085 aa5.13□□□□□ -1.59
HHF1YBR009C SPB4P25808 606 aaPredicted RBP5.12□□□□□ -1.59
HHF1YBR009C EDS1P38073 919 aa5.12□□□□□ -1.59
HHF1YBR009C SET1P38827 1080 aaKnown RBP5.12□□□□□ -1.59
HHF1YBR009C BMT6Q12291 365 aa5.11□□□□□ -1.59
HHF1YBR009C SAM3Q08986 587 aa5.1□□□□□ -1.59
HHF1YBR009C PTC3P34221 468 aaKnown RBP5.09□□□□□ -1.59
HHF1YBR009C SET4P42948 560 aa5.09□□□□□ -1.59
HHF1YBR009C YOL036WQ08206 761 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms