RNA–Protein interactions for RNA: ENST00000642122.1

ALK-207, Transcript of ALK receptor tyrosine kinase, humanhuman

BASIC

Gene ALK, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-207ENST00000642122 NISCHQ9Y2I1 1504 aa24.55■■□□□ 1.52
ALK-207ENST00000642122 CCDC180Q9P1Z9 1646 aa21.47■■□□□ 1.03
ALK-207ENST00000642122 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
ALK-207ENST00000642122 ZCCHC6Q5VYS8 1495 aaKnown RBP20.67■□□□□ 0.9
ALK-207ENST00000642122 DCAF8L2P0C7V8 631 aa20.48■□□□□ 0.87
ALK-207ENST00000642122 ABCC9O60706 1549 aa20.33■□□□□ 0.85
ALK-207ENST00000642122 DCAF1Q9Y4B6 1507 aa20.29■□□□□ 0.84
ALK-207ENST00000642122 SUPT5HO00267 1087 aaKnown RBP20.24■□□□□ 0.83
ALK-207ENST00000642122 MYO15BQ96JP2 1530 aa20.08■□□□□ 0.8
ALK-207ENST00000642122 NACADO15069 1562 aa19.98■□□□□ 0.79
ALK-207ENST00000642122 RB1CC1Q8TDY2 1594 aa19.83■□□□□ 0.77
ALK-207ENST00000642122 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
ALK-207ENST00000642122 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
ALK-207ENST00000642122 UNC13AQ9UPW8 1703 aa19.5■□□□□ 0.71
ALK-207ENST00000642122 RSF1Q96T23 1441 aaPredicted RBP19.31■□□□□ 0.68
ALK-207ENST00000642122 BICRAQ9NZM4 1560 aa19.25■□□□□ 0.67
ALK-207ENST00000642122 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
ALK-207ENST00000642122 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
ALK-207ENST00000642122 MROH2BQ7Z745 1585 aa19.07■□□□□ 0.64
ALK-207ENST00000642122 LOC105371045A0A1W2PR82 267 aa18.99■□□□□ 0.63
ALK-207ENST00000642122 BAZ1AQ9NRL2 1556 aaPredicted RBP18.97■□□□□ 0.63
ALK-207ENST00000642122 WIZO95785 1651 aa18.96■□□□□ 0.63
ALK-207ENST00000642122 SMARCA4P51532 1647 aa18.91■□□□□ 0.62
ALK-207ENST00000642122 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
ALK-207ENST00000642122 FAM9AQ8IZU1 332 aaPredicted RBP18.74■□□□□ 0.59
ALK-207ENST00000642122 EIF4G1Q04637 1599 aaKnown RBP18.67■□□□□ 0.58
ALK-207ENST00000642122 PEG3Q9GZU2 1588 aa18.67■□□□□ 0.58
ALK-207ENST00000642122 PCGF6Q9BYE7 350 aa18.66■□□□□ 0.58
ALK-207ENST00000642122 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
ALK-207ENST00000642122 TOP2AP11388 1531 aaKnown RBP18.61■□□□□ 0.57
ALK-207ENST00000642122 ATAD2BQ9ULI0 1458 aa18.59■□□□□ 0.57
ALK-207ENST00000642122 SMARCA2P51531 1590 aa18.58■□□□□ 0.57
ALK-207ENST00000642122 CCDC88BA6NC98 1476 aa18.56■□□□□ 0.56
ALK-207ENST00000642122 BAZ1BQ9UIG0 1483 aaKnown RBP18.49■□□□□ 0.55
ALK-207ENST00000642122 ABCC8Q09428 1581 aa18.47■□□□□ 0.55
ALK-207ENST00000642122 NCAPD3P42695 1498 aa18.43■□□□□ 0.54
ALK-207ENST00000642122 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
ALK-207ENST00000642122 CC2D2AQ9P2K1 1620 aa18.42■□□□□ 0.54
ALK-207ENST00000642122 HRCP23327 699 aa18.41■□□□□ 0.54
ALK-207ENST00000642122 TRIM26Q12899 539 aaPredicted RBP18.29■□□□□ 0.52
ALK-207ENST00000642122 SOGA1O94964 1423 aa18.23■□□□□ 0.51
ALK-207ENST00000642122 PPARGC1BQ86YN6 1023 aaKnown RBP18.2■□□□□ 0.5
ALK-207ENST00000642122 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
ALK-207ENST00000642122 WRNQ14191 1432 aaPredicted RBP eCLIP18.13■□□□□ 0.49
ALK-207ENST00000642122 SYNJ1O43426 1573 aa18.08■□□□□ 0.49
ALK-207ENST00000642122 CSRNP3Q8WYN3 585 aa18.05■□□□□ 0.48
ALK-207ENST00000642122 CFTRP13569 1480 aa18.01■□□□□ 0.47
ALK-207ENST00000642122 PRDM2Q13029 1718 aa17.99■□□□□ 0.47
ALK-207ENST00000642122 CEP162Q5TB80 1403 aa17.98■□□□□ 0.47
ALK-207ENST00000642122 UBTFP17480 764 aaKnown RBP17.98■□□□□ 0.47
ALK-207ENST00000642122 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
ALK-207ENST00000642122 TTBK1Q5TCY1 1321 aaPredicted RBP17.97■□□□□ 0.47
ALK-207ENST00000642122 EEA1Q15075 1411 aa17.96■□□□□ 0.47
ALK-207ENST00000642122 CADPSQ9ULU8 1353 aa17.95■□□□□ 0.46
ALK-207ENST00000642122 TNIKQ9UKE5 1360 aa17.93■□□□□ 0.46
ALK-207ENST00000642122 GOLGA3Q08378 1498 aa17.89■□□□□ 0.45
ALK-207ENST00000642122 NESP48681 1621 aa17.84■□□□□ 0.45
ALK-207ENST00000642122 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.45
ALK-207ENST00000642122 TOP2BQ02880 1626 aa17.83■□□□□ 0.45
ALK-207ENST00000642122 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
ALK-207ENST00000642122 RANGAP1P46060 587 aaPredicted RBP17.79■□□□□ 0.44
ALK-207ENST00000642122 RAPGEF2Q9Y4G8 1499 aa17.79■□□□□ 0.44
ALK-207ENST00000642122 BIVM-ERCC5R4GMW8 1640 aa17.77■□□□□ 0.44
ALK-207ENST00000642122 KIF21BO75037 1637 aa17.77■□□□□ 0.44
ALK-207ENST00000642122 CUX1P39880 1505 aa17.77■□□□□ 0.43
ALK-207ENST00000642122 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
ALK-207ENST00000642122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.71■□□□□ 0.43
ALK-207ENST00000642122 CLIP1P30622 1438 aa17.7■□□□□ 0.42
ALK-207ENST00000642122 ZEB1P37275 1124 aaPredicted RBP17.68■□□□□ 0.42
ALK-207ENST00000642122 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
ALK-207ENST00000642122 KIF21AQ7Z4S6 1674 aa17.66■□□□□ 0.42
ALK-207ENST00000642122 DNMBPQ6XZF7 1577 aa17.61■□□□□ 0.41
ALK-207ENST00000642122 PRXQ9BXM0 1461 aa17.6■□□□□ 0.41
ALK-207ENST00000642122 CCER1Q8TC90 406 aaPredicted RBP17.59■□□□□ 0.41
ALK-207ENST00000642122 TOPBP1Q92547 1522 aa17.58■□□□□ 0.4
ALK-207ENST00000642122 KIF27Q86VH2 1401 aa17.57■□□□□ 0.4
ALK-207ENST00000642122 VPS8Q8N3P4 1428 aa17.57■□□□□ 0.4
ALK-207ENST00000642122 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
ALK-207ENST00000642122 URB2Q14146 1524 aaKnown RBP17.55■□□□□ 0.4
ALK-207ENST00000642122 ERICH3Q5RHP9 1530 aa17.52■□□□□ 0.4
ALK-207ENST00000642122 CUX2O14529 1486 aa17.5■□□□□ 0.39
ALK-207ENST00000642122 POLA1P09884 1462 aaPredicted RBP17.49■□□□□ 0.39
ALK-207ENST00000642122 ARAP1Q96P48 1450 aa17.46■□□□□ 0.39
ALK-207ENST00000642122 MRC2Q9UBG0 1479 aa17.46■□□□□ 0.39
ALK-207ENST00000642122 APLP2Q06481 763 aa17.46■□□□□ 0.38
ALK-207ENST00000642122 HNRNPUL2Q1KMD3 747 aaKnown RBP17.46■□□□□ 0.38
ALK-207ENST00000642122 IGF1RP08069 1367 aa17.44■□□□□ 0.38
ALK-207ENST00000642122 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
ALK-207ENST00000642122 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
ALK-207ENST00000642122 ABCA10Q8WWZ4 1543 aa17.4■□□□□ 0.38
ALK-207ENST00000642122 WDR62O43379 1518 aa17.39■□□□□ 0.37
ALK-207ENST00000642122 WDR97A6NE52 1622 aa17.38■□□□□ 0.37
ALK-207ENST00000642122 KANK4Q5T7N3 995 aaPredicted RBP17.38■□□□□ 0.37
ALK-207ENST00000642122 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
ALK-207ENST00000642122 ARHGAP35Q9NRY4 1499 aa17.36■□□□□ 0.37
ALK-207ENST00000642122 CARMIL1Q5VZK9 1371 aa17.35■□□□□ 0.37
ALK-207ENST00000642122 TARBP1Q13395 1621 aaKnown RBP17.33■□□□□ 0.37
ALK-207ENST00000642122 ABCA5Q8WWZ7 1642 aa17.28■□□□□ 0.36
ALK-207ENST00000642122 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
ALK-207ENST00000642122 P3H3Q8IVL6 736 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms