RNA–Protein interactions for RNA: ENST00000641923.1

SAMMSON-223, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,213 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-223ENST00000641923 NISCHQ9Y2I1 1504 aa21.09■□□□□ 0.97
SAMMSON-223ENST00000641923 AEBP2Q6ZN18 517 aaPredicted RBP20.64■□□□□ 0.89
SAMMSON-223ENST00000641923 CHIC1Q5VXU3 224 aa19.66■□□□□ 0.74
SAMMSON-223ENST00000641923 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.59
SAMMSON-223ENST00000641923 ABCC9O60706 1549 aa17.81■□□□□ 0.44
SAMMSON-223ENST00000641923 ZCCHC6Q5VYS8 1495 aaKnown RBP17.65■□□□□ 0.42
SAMMSON-223ENST00000641923 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
SAMMSON-223ENST00000641923 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
SAMMSON-223ENST00000641923 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
SAMMSON-223ENST00000641923 NACADO15069 1562 aa17.5■□□□□ 0.39
SAMMSON-223ENST00000641923 RB1CC1Q8TDY2 1594 aa17.43■□□□□ 0.38
SAMMSON-223ENST00000641923 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
SAMMSON-223ENST00000641923 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
SAMMSON-223ENST00000641923 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
SAMMSON-223ENST00000641923 SCRIBQ14160 1630 aa16.95■□□□□ 0.3
SAMMSON-223ENST00000641923 SHROOM4Q9ULL8 1493 aa16.85■□□□□ 0.29
SAMMSON-223ENST00000641923 BICRAQ9NZM4 1560 aa16.77■□□□□ 0.27
SAMMSON-223ENST00000641923 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.25
SAMMSON-223ENST00000641923 FOXD1Q16676 465 aa16.4■□□□□ 0.22
SAMMSON-223ENST00000641923 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
SAMMSON-223ENST00000641923 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
SAMMSON-223ENST00000641923 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
SAMMSON-223ENST00000641923 CECR2Q9BXF3 1484 aa16.29■□□□□ 0.2
SAMMSON-223ENST00000641923 SMARCA2P51531 1590 aa16.2■□□□□ 0.18
SAMMSON-223ENST00000641923 PEG3Q9GZU2 1588 aa16.2■□□□□ 0.18
SAMMSON-223ENST00000641923 MROH2BQ7Z745 1585 aa16.19■□□□□ 0.18
SAMMSON-223ENST00000641923 CC2D2AQ9P2K1 1620 aa16.18■□□□□ 0.18
SAMMSON-223ENST00000641923 RSF1Q96T23 1441 aaPredicted RBP16.15■□□□□ 0.18
SAMMSON-223ENST00000641923 ATAD2BQ9ULI0 1458 aa16.11■□□□□ 0.17
SAMMSON-223ENST00000641923 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
SAMMSON-223ENST00000641923 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
SAMMSON-223ENST00000641923 WIZO95785 1651 aa16.04■□□□□ 0.16
SAMMSON-223ENST00000641923 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
SAMMSON-223ENST00000641923 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
SAMMSON-223ENST00000641923 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
SAMMSON-223ENST00000641923 SUPT5HO00267 1087 aaKnown RBP15.92■□□□□ 0.14
SAMMSON-223ENST00000641923 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
SAMMSON-223ENST00000641923 CCDC88BA6NC98 1476 aa15.71■□□□□ 0.11
SAMMSON-223ENST00000641923 LAMC3Q9Y6N6 1575 aa15.66■□□□□ 0.1
SAMMSON-223ENST00000641923 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
SAMMSON-223ENST00000641923 CFTRP13569 1480 aa15.61■□□□□ 0.09
SAMMSON-223ENST00000641923 PRDM2Q13029 1718 aa15.6■□□□□ 0.09
SAMMSON-223ENST00000641923 PDS5BQ9NTI5 1447 aa15.54■□□□□ 0.08
SAMMSON-223ENST00000641923 NESP48681 1621 aa15.47■□□□□ 0.07
SAMMSON-223ENST00000641923 FANCD2Q9BXW9 1451 aa15.44■□□□□ 0.06
SAMMSON-223ENST00000641923 CEP164Q9UPV0 1460 aa15.42■□□□□ 0.06
SAMMSON-223ENST00000641923 ERCC6Q03468 1493 aa15.41■□□□□ 0.06
SAMMSON-223ENST00000641923 MSH5O43196 834 aa15.41■□□□□ 0.06
SAMMSON-223ENST00000641923 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
SAMMSON-223ENST00000641923 ADRA2BP18089 450 aa15.39■□□□□ 0.05
SAMMSON-223ENST00000641923 KIF21AQ7Z4S6 1674 aa15.38■□□□□ 0.05
SAMMSON-223ENST00000641923 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
SAMMSON-223ENST00000641923 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
SAMMSON-223ENST00000641923 MRC2Q9UBG0 1479 aa15.32■□□□□ 0.04
SAMMSON-223ENST00000641923 WRNQ14191 1432 aaPredicted RBP eCLIP15.27■□□□□ 0.04
SAMMSON-223ENST00000641923 DNMBPQ6XZF7 1577 aa15.27■□□□□ 0.03
SAMMSON-223ENST00000641923 THOC2Q8NI27 1593 aaKnown RBP15.27■□□□□ 0.03
SAMMSON-223ENST00000641923 WDR62O43379 1518 aa15.26■□□□□ 0.03
SAMMSON-223ENST00000641923 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
SAMMSON-223ENST00000641923 TOP2BQ02880 1626 aa15.22■□□□□ 0.03
SAMMSON-223ENST00000641923 URB2Q14146 1524 aaKnown RBP15.22■□□□□ 0.03
SAMMSON-223ENST00000641923 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.03
SAMMSON-223ENST00000641923 CUX2O14529 1486 aa15.19■□□□□ 0.02
SAMMSON-223ENST00000641923 CUX1P39880 1505 aa15.18■□□□□ 0.02
SAMMSON-223ENST00000641923 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
SAMMSON-223ENST00000641923 TRIM41Q8WV44 630 aa15.11■□□□□ 0.01
SAMMSON-223ENST00000641923 FGD5Q6ZNL6 1462 aa15.11■□□□□ 0.01
SAMMSON-223ENST00000641923 POLA1P09884 1462 aaPredicted RBP15.1■□□□□ 0.01
SAMMSON-223ENST00000641923 IFT140Q96RY7 1462 aa15.1■□□□□ 0.01
SAMMSON-223ENST00000641923 WDR97A6NE52 1622 aa15.09■□□□□ 0.01
SAMMSON-223ENST00000641923 SOGA1O94964 1423 aa15.06■□□□□ 0
SAMMSON-223ENST00000641923 ABCA10Q8WWZ4 1543 aa15.03■□□□□ -0
SAMMSON-223ENST00000641923 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
SAMMSON-223ENST00000641923 POTEDQ86YR6 584 aa14.99□□□□□ -0.01
SAMMSON-223ENST00000641923 RAD54L2Q9Y4B4 1467 aa14.97□□□□□ -0.01
SAMMSON-223ENST00000641923 EEA1Q15075 1411 aa14.97□□□□□ -0.01
SAMMSON-223ENST00000641923 KIF27Q86VH2 1401 aa14.96□□□□□ -0.01
SAMMSON-223ENST00000641923 ABCA5Q8WWZ7 1642 aa14.92□□□□□ -0.02
SAMMSON-223ENST00000641923 EIF4G3O43432 1585 aaKnown RBP14.91□□□□□ -0.02
SAMMSON-223ENST00000641923 GAPVD1Q14C86 1478 aa14.9□□□□□ -0.02
SAMMSON-223ENST00000641923 ERICH3Q5RHP9 1530 aa14.89□□□□□ -0.03
SAMMSON-223ENST00000641923 GRIN2BQ13224 1484 aa14.89□□□□□ -0.03
SAMMSON-223ENST00000641923 PBRM1Q86U86 1689 aa14.87□□□□□ -0.03
SAMMSON-223ENST00000641923 ZNF608Q9ULD9 1512 aaPredicted RBP14.87□□□□□ -0.03
SAMMSON-223ENST00000641923 TDRD9Q8NDG6 1382 aaKnown RBP14.86□□□□□ -0.03
SAMMSON-223ENST00000641923 AQRO60306 1485 aaKnown RBP eCLIP14.84□□□□□ -0.03
SAMMSON-223ENST00000641923 MAGI1Q96QZ7 1491 aaPredicted RBP14.84□□□□□ -0.03
SAMMSON-223ENST00000641923 CUL7Q14999 1698 aa14.84□□□□□ -0.03
SAMMSON-223ENST00000641923 IGF1RP08069 1367 aa14.78□□□□□ -0.04
SAMMSON-223ENST00000641923 CSRNP3Q8WYN3 585 aa14.78□□□□□ -0.04
SAMMSON-223ENST00000641923 FHAD1B1AJZ9 1412 aa14.77□□□□□ -0.04
SAMMSON-223ENST00000641923 ADAMTS12P58397 1594 aa14.76□□□□□ -0.05
SAMMSON-223ENST00000641923 SNAPC4Q5SXM2 1469 aa14.76□□□□□ -0.05
SAMMSON-223ENST00000641923 SYNJ2O15056 1496 aa14.75□□□□□ -0.05
SAMMSON-223ENST00000641923 RUSC2Q8N2Y8 1516 aa14.74□□□□□ -0.05
SAMMSON-223ENST00000641923 CARMIL1Q5VZK9 1371 aa14.73□□□□□ -0.05
SAMMSON-223ENST00000641923 KIF21BO75037 1637 aa14.72□□□□□ -0.05
SAMMSON-223ENST00000641923 PRXQ9BXM0 1461 aa14.71□□□□□ -0.05
SAMMSON-223ENST00000641923 RAPGEF2Q9Y4G8 1499 aa14.71□□□□□ -0.05
SAMMSON-223ENST00000641923 CHMP7Q8WUX9 453 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms