RNA–Protein interactions for RNA: ENST00000641005.1

SAMMSON-203, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 2,168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-203ENST00000641005 NISCHQ9Y2I1 1504 aa17.81■□□□□ 0.44
SAMMSON-203ENST00000641005 CCDC180Q9P1Z9 1646 aa15.68■□□□□ 0.1
SAMMSON-203ENST00000641005 ABCC9O60706 1549 aa15.35■□□□□ 0.05
SAMMSON-203ENST00000641005 DCAF8L2P0C7V8 631 aa14.93□□□□□ -0.02
SAMMSON-203ENST00000641005 ZCCHC6Q5VYS8 1495 aaKnown RBP14.87□□□□□ -0.03
SAMMSON-203ENST00000641005 NACADO15069 1562 aa14.72□□□□□ -0.05
SAMMSON-203ENST00000641005 RB1CC1Q8TDY2 1594 aa14.71□□□□□ -0.06
SAMMSON-203ENST00000641005 DCAF1Q9Y4B6 1507 aa14.65□□□□□ -0.06
SAMMSON-203ENST00000641005 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
SAMMSON-203ENST00000641005 UNC13AQ9UPW8 1703 aa14.47□□□□□ -0.09
SAMMSON-203ENST00000641005 SCRIBQ14160 1630 aa14.46□□□□□ -0.1
SAMMSON-203ENST00000641005 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
SAMMSON-203ENST00000641005 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
SAMMSON-203ENST00000641005 SHROOM4Q9ULL8 1493 aa14.33□□□□□ -0.12
SAMMSON-203ENST00000641005 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
SAMMSON-203ENST00000641005 CECR2Q9BXF3 1484 aa13.94□□□□□ -0.18
SAMMSON-203ENST00000641005 EIF4G1Q04637 1599 aaKnown RBP13.93□□□□□ -0.18
SAMMSON-203ENST00000641005 CC2D2AQ9P2K1 1620 aa13.84□□□□□ -0.19
SAMMSON-203ENST00000641005 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
SAMMSON-203ENST00000641005 MROH2BQ7Z745 1585 aa13.79□□□□□ -0.2
SAMMSON-203ENST00000641005 BAZ1AQ9NRL2 1556 aaPredicted RBP13.75□□□□□ -0.21
SAMMSON-203ENST00000641005 ATAD2BQ9ULI0 1458 aa13.68□□□□□ -0.22
SAMMSON-203ENST00000641005 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
SAMMSON-203ENST00000641005 WIZO95785 1651 aa13.65□□□□□ -0.22
SAMMSON-203ENST00000641005 SMARCA2P51531 1590 aa13.61□□□□□ -0.23
SAMMSON-203ENST00000641005 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
SAMMSON-203ENST00000641005 PEG3Q9GZU2 1588 aa13.6□□□□□ -0.23
SAMMSON-203ENST00000641005 BAZ1BQ9UIG0 1483 aaKnown RBP13.56□□□□□ -0.24
SAMMSON-203ENST00000641005 HMGXB3Q12766 1538 aa13.54□□□□□ -0.24
SAMMSON-203ENST00000641005 SUPT5HO00267 1087 aaKnown RBP13.52□□□□□ -0.24
SAMMSON-203ENST00000641005 TOP2AP11388 1531 aaKnown RBP13.44□□□□□ -0.26
SAMMSON-203ENST00000641005 NESP48681 1621 aa13.35□□□□□ -0.27
SAMMSON-203ENST00000641005 CCDC88BA6NC98 1476 aa13.34□□□□□ -0.27
SAMMSON-203ENST00000641005 CADPSQ9ULU8 1353 aa13.24□□□□□ -0.29
SAMMSON-203ENST00000641005 AEBP2Q6ZN18 517 aaPredicted RBP13.22□□□□□ -0.29
SAMMSON-203ENST00000641005 LAMC3Q9Y6N6 1575 aa13.2□□□□□ -0.3
SAMMSON-203ENST00000641005 CFTRP13569 1480 aa13.2□□□□□ -0.3
SAMMSON-203ENST00000641005 ERCC6Q03468 1493 aa13.15□□□□□ -0.3
SAMMSON-203ENST00000641005 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.3
SAMMSON-203ENST00000641005 PDS5BQ9NTI5 1447 aa13.12□□□□□ -0.31
SAMMSON-203ENST00000641005 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
SAMMSON-203ENST00000641005 PRDM2Q13029 1718 aa13.07□□□□□ -0.32
SAMMSON-203ENST00000641005 CEP164Q9UPV0 1460 aa13.05□□□□□ -0.32
SAMMSON-203ENST00000641005 THOC2Q8NI27 1593 aaKnown RBP13.04□□□□□ -0.32
SAMMSON-203ENST00000641005 MRC2Q9UBG0 1479 aa13□□□□□ -0.33
SAMMSON-203ENST00000641005 URB2Q14146 1524 aaKnown RBP12.99□□□□□ -0.33
SAMMSON-203ENST00000641005 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
SAMMSON-203ENST00000641005 WDR62O43379 1518 aa12.95□□□□□ -0.34
SAMMSON-203ENST00000641005 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
SAMMSON-203ENST00000641005 CUX1P39880 1505 aa12.91□□□□□ -0.34
SAMMSON-203ENST00000641005 DNMBPQ6XZF7 1577 aa12.89□□□□□ -0.35
SAMMSON-203ENST00000641005 CUX2O14529 1486 aa12.89□□□□□ -0.35
SAMMSON-203ENST00000641005 SYNJ1O43426 1573 aa12.86□□□□□ -0.35
SAMMSON-203ENST00000641005 WRNQ14191 1432 aaPredicted RBP eCLIP12.86□□□□□ -0.35
SAMMSON-203ENST00000641005 POLA1P09884 1462 aaPredicted RBP12.84□□□□□ -0.35
SAMMSON-203ENST00000641005 FGD5Q6ZNL6 1462 aa12.83□□□□□ -0.36
SAMMSON-203ENST00000641005 RAD54L2Q9Y4B4 1467 aa12.83□□□□□ -0.36
SAMMSON-203ENST00000641005 CHIC1Q5VXU3 224 aa12.81□□□□□ -0.36
SAMMSON-203ENST00000641005 TOP2BQ02880 1626 aa12.8□□□□□ -0.36
SAMMSON-203ENST00000641005 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
SAMMSON-203ENST00000641005 BIVM-ERCC5R4GMW8 1640 aa12.78□□□□□ -0.36
SAMMSON-203ENST00000641005 SOGA1O94964 1423 aa12.77□□□□□ -0.36
SAMMSON-203ENST00000641005 TARBP1Q13395 1621 aaKnown RBP12.77□□□□□ -0.37
SAMMSON-203ENST00000641005 IFT140Q96RY7 1462 aa12.75□□□□□ -0.37
SAMMSON-203ENST00000641005 TDRD9Q8NDG6 1382 aaKnown RBP12.74□□□□□ -0.37
SAMMSON-203ENST00000641005 AQRO60306 1485 aaKnown RBP eCLIP12.73□□□□□ -0.37
SAMMSON-203ENST00000641005 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
SAMMSON-203ENST00000641005 EIF4G3O43432 1585 aaKnown RBP12.69□□□□□ -0.38
SAMMSON-203ENST00000641005 WDR97A6NE52 1622 aa12.69□□□□□ -0.38
SAMMSON-203ENST00000641005 ABCA10Q8WWZ4 1543 aa12.67□□□□□ -0.38
SAMMSON-203ENST00000641005 GAPVD1Q14C86 1478 aa12.62□□□□□ -0.39
SAMMSON-203ENST00000641005 ABCA5Q8WWZ7 1642 aa12.62□□□□□ -0.39
SAMMSON-203ENST00000641005 RUSC2Q8N2Y8 1516 aa12.62□□□□□ -0.39
SAMMSON-203ENST00000641005 SNAPC4Q5SXM2 1469 aa12.58□□□□□ -0.4
SAMMSON-203ENST00000641005 PBRM1Q86U86 1689 aa12.58□□□□□ -0.4
SAMMSON-203ENST00000641005 GRIN2BQ13224 1484 aa12.57□□□□□ -0.4
SAMMSON-203ENST00000641005 FBLN2P98095 1184 aa12.55□□□□□ -0.4
SAMMSON-203ENST00000641005 KIF27Q86VH2 1401 aa12.55□□□□□ -0.4
SAMMSON-203ENST00000641005 FAM9AQ8IZU1 332 aaPredicted RBP12.53□□□□□ -0.4
SAMMSON-203ENST00000641005 IGF1RP08069 1367 aa12.52□□□□□ -0.4
SAMMSON-203ENST00000641005 CHD1O14646 1710 aa12.51□□□□□ -0.41
SAMMSON-203ENST00000641005 MAGI1Q96QZ7 1491 aaPredicted RBP12.5□□□□□ -0.41
SAMMSON-203ENST00000641005 ERICH3Q5RHP9 1530 aa12.49□□□□□ -0.41
SAMMSON-203ENST00000641005 ADAMTS12P58397 1594 aa12.49□□□□□ -0.41
SAMMSON-203ENST00000641005 CHMP7Q8WUX9 453 aaPredicted RBP12.49□□□□□ -0.41
SAMMSON-203ENST00000641005 SYNJ2O15056 1496 aa12.47□□□□□ -0.41
SAMMSON-203ENST00000641005 FHAD1B1AJZ9 1412 aa12.45□□□□□ -0.42
SAMMSON-203ENST00000641005 CARMIL1Q5VZK9 1371 aa12.44□□□□□ -0.42
SAMMSON-203ENST00000641005 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
SAMMSON-203ENST00000641005 GRIN2AQ12879 1464 aa12.43□□□□□ -0.42
SAMMSON-203ENST00000641005 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
SAMMSON-203ENST00000641005 CSRNP3Q8WYN3 585 aa12.41□□□□□ -0.42
SAMMSON-203ENST00000641005 CUL7Q14999 1698 aa12.4□□□□□ -0.42
SAMMSON-203ENST00000641005 CEP170Q5SW79 1584 aa12.4□□□□□ -0.43
SAMMSON-203ENST00000641005 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
SAMMSON-203ENST00000641005 PRXQ9BXM0 1461 aa12.37□□□□□ -0.43
SAMMSON-203ENST00000641005 RAPGEF2Q9Y4G8 1499 aa12.36□□□□□ -0.43
SAMMSON-203ENST00000641005 NUP160Q12769 1436 aa12.36□□□□□ -0.43
SAMMSON-203ENST00000641005 EEA1Q15075 1411 aa12.35□□□□□ -0.43
SAMMSON-203ENST00000641005 CLASP1Q7Z460 1538 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms