RNA–Protein interactions for RNA: ENST00000640981.1

GABRD-219, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5

Gene GABRD, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-219ENST00000640981 NISCHQ9Y2I1 1504 aa43.4■■■■■ 4.54
GABRD-219ENST00000640981 CCDC180Q9P1Z9 1646 aa38.39■■■■□ 3.74
GABRD-219ENST00000640981 ABCC9O60706 1549 aa37.5■■■■□ 3.59
GABRD-219ENST00000640981 DCAF8L2P0C7V8 631 aa36.43■■■■□ 3.42
GABRD-219ENST00000640981 ZCCHC6Q5VYS8 1495 aaKnown RBP36.17■■■■□ 3.38
GABRD-219ENST00000640981 NACADO15069 1562 aa36.09■■■■□ 3.37
GABRD-219ENST00000640981 RB1CC1Q8TDY2 1594 aa36.09■■■■□ 3.37
GABRD-219ENST00000640981 MYO15BQ96JP2 1530 aa35.88■■■■□ 3.33
GABRD-219ENST00000640981 DCAF1Q9Y4B6 1507 aa35.84■■■■□ 3.33
GABRD-219ENST00000640981 UNC13AQ9UPW8 1703 aa35.25■■■■□ 3.23
GABRD-219ENST00000640981 SCRIBQ14160 1630 aa35.17■■■■□ 3.22
GABRD-219ENST00000640981 PABPN1Q86U42 306 aaKnown RBP eCLIP35.17■■■■□ 3.22
GABRD-219ENST00000640981 BICRAQ9NZM4 1560 aa34.96■■■■□ 3.19
GABRD-219ENST00000640981 SHROOM4Q9ULL8 1493 aa34.62■■■■□ 3.13
GABRD-219ENST00000640981 DNAJC5BQ9UF47 199 aa34.23■■■■□ 3.07
GABRD-219ENST00000640981 EIF4G1Q04637 1599 aaKnown RBP34.04■■■■□ 3.04
GABRD-219ENST00000640981 CC2D2AQ9P2K1 1620 aa33.86■■■■□ 3.01
GABRD-219ENST00000640981 CECR2Q9BXF3 1484 aa33.84■■■■□ 3.01
GABRD-219ENST00000640981 BAZ1AQ9NRL2 1556 aaPredicted RBP33.61■■■□□ 2.97
GABRD-219ENST00000640981 SMARCA4P51532 1647 aa33.61■■■□□ 2.97
GABRD-219ENST00000640981 MROH2BQ7Z745 1585 aa33.48■■■□□ 2.95
GABRD-219ENST00000640981 ATAD2BQ9ULI0 1458 aa33.39■■■□□ 2.94
GABRD-219ENST00000640981 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
GABRD-219ENST00000640981 NCAPD3P42695 1498 aa33.31■■■□□ 2.92
GABRD-219ENST00000640981 PEG3Q9GZU2 1588 aa33.21■■■□□ 2.91
GABRD-219ENST00000640981 RSF1Q96T23 1441 aaPredicted RBP33.19■■■□□ 2.9
GABRD-219ENST00000640981 WIZO95785 1651 aa33.15■■■□□ 2.9
GABRD-219ENST00000640981 BAZ1BQ9UIG0 1483 aaKnown RBP33.15■■■□□ 2.9
GABRD-219ENST00000640981 HMGXB3Q12766 1538 aa33.12■■■□□ 2.89
GABRD-219ENST00000640981 TOP2AP11388 1531 aaKnown RBP32.76■■■□□ 2.83
GABRD-219ENST00000640981 SUPT5HO00267 1087 aaKnown RBP32.74■■■□□ 2.83
GABRD-219ENST00000640981 NESP48681 1621 aa32.51■■■□□ 2.79
GABRD-219ENST00000640981 CCDC88BA6NC98 1476 aa32.44■■■□□ 2.78
GABRD-219ENST00000640981 CADPSQ9ULU8 1353 aa32.4■■■□□ 2.78
GABRD-219ENST00000640981 LAMC3Q9Y6N6 1575 aa32.37■■■□□ 2.77
GABRD-219ENST00000640981 ERCC6Q03468 1493 aa32.3■■■□□ 2.76
GABRD-219ENST00000640981 CFTRP13569 1480 aa32.22■■■□□ 2.75
GABRD-219ENST00000640981 PDS5BQ9NTI5 1447 aa32.21■■■□□ 2.75
GABRD-219ENST00000640981 KIF21AQ7Z4S6 1674 aa32.08■■■□□ 2.73
GABRD-219ENST00000640981 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
GABRD-219ENST00000640981 CEP164Q9UPV0 1460 aa31.95■■■□□ 2.7
GABRD-219ENST00000640981 PRDM2Q13029 1718 aa31.93■■■□□ 2.7
GABRD-219ENST00000640981 THOC2Q8NI27 1593 aaKnown RBP31.85■■■□□ 2.69
GABRD-219ENST00000640981 MRC2Q9UBG0 1479 aa31.84■■■□□ 2.69
GABRD-219ENST00000640981 CUX2O14529 1486 aa31.77■■■□□ 2.68
GABRD-219ENST00000640981 WDR62O43379 1518 aa31.68■■■□□ 2.66
GABRD-219ENST00000640981 URB2Q14146 1524 aaKnown RBP31.68■■■□□ 2.66
GABRD-219ENST00000640981 TOPBP1Q92547 1522 aa31.53■■■□□ 2.64
GABRD-219ENST00000640981 ABCC8Q09428 1581 aa31.52■■■□□ 2.64
GABRD-219ENST00000640981 DNMBPQ6XZF7 1577 aa31.48■■■□□ 2.63
GABRD-219ENST00000640981 CUX1P39880 1505 aa31.39■■■□□ 2.61
GABRD-219ENST00000640981 WRNQ14191 1432 aaPredicted RBP eCLIP31.3■■■□□ 2.6
GABRD-219ENST00000640981 POLA1P09884 1462 aaPredicted RBP31.27■■■□□ 2.6
GABRD-219ENST00000640981 IFT140Q96RY7 1462 aa31.27■■■□□ 2.6
GABRD-219ENST00000640981 FGD5Q6ZNL6 1462 aa31.26■■■□□ 2.59
GABRD-219ENST00000640981 SOGA1O94964 1423 aa31.22■■■□□ 2.59
GABRD-219ENST00000640981 RAD54L2Q9Y4B4 1467 aa31.2■■■□□ 2.58
GABRD-219ENST00000640981 SYNJ1O43426 1573 aa31.18■■■□□ 2.58
GABRD-219ENST00000640981 TOP2BQ02880 1626 aa31.15■■■□□ 2.58
GABRD-219ENST00000640981 ZNF608Q9ULD9 1512 aaPredicted RBP31.14■■■□□ 2.57
GABRD-219ENST00000640981 TARBP1Q13395 1621 aaKnown RBP31.13■■■□□ 2.57
GABRD-219ENST00000640981 BIVM-ERCC5R4GMW8 1640 aa31.13■■■□□ 2.57
GABRD-219ENST00000640981 TDRD9Q8NDG6 1382 aaKnown RBP31.04■■■□□ 2.56
GABRD-219ENST00000640981 AQRO60306 1485 aaKnown RBP eCLIP31.03■■■□□ 2.56
GABRD-219ENST00000640981 EIF4G3O43432 1585 aaKnown RBP30.96■■■□□ 2.55
GABRD-219ENST00000640981 ABCA10Q8WWZ4 1543 aa30.93■■■□□ 2.54
GABRD-219ENST00000640981 WDR97A6NE52 1622 aa30.89■■■□□ 2.54
GABRD-219ENST00000640981 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
GABRD-219ENST00000640981 GAPVD1Q14C86 1478 aa30.82■■■□□ 2.53
GABRD-219ENST00000640981 GRIN2BQ13224 1484 aa30.77■■■□□ 2.52
GABRD-219ENST00000640981 ABCA5Q8WWZ7 1642 aa30.75■■■□□ 2.51
GABRD-219ENST00000640981 FBLN2P98095 1184 aa30.73■■■□□ 2.51
GABRD-219ENST00000640981 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.51
GABRD-219ENST00000640981 PBRM1Q86U86 1689 aa30.69■■■□□ 2.5
GABRD-219ENST00000640981 OSCARQ8IYS5 282 aa30.64■■■□□ 2.5
GABRD-219ENST00000640981 KIF27Q86VH2 1401 aa30.64■■■□□ 2.49
GABRD-219ENST00000640981 CHIC1Q5VXU3 224 aa30.63■■■□□ 2.49
GABRD-219ENST00000640981 MAGI1Q96QZ7 1491 aaPredicted RBP30.63■■■□□ 2.49
GABRD-219ENST00000640981 CHMP7Q8WUX9 453 aaPredicted RBP30.62■■■□□ 2.49
GABRD-219ENST00000640981 DNAJC5Q9H3Z4 198 aa30.61■■■□□ 2.49
GABRD-219ENST00000640981 ERICH3Q5RHP9 1530 aa30.55■■■□□ 2.48
GABRD-219ENST00000640981 CHD1O14646 1710 aa30.55■■■□□ 2.48
GABRD-219ENST00000640981 SYNJ2O15056 1496 aa30.52■■■□□ 2.48
GABRD-219ENST00000640981 IGF1RP08069 1367 aa30.51■■■□□ 2.47
GABRD-219ENST00000640981 RUSC2Q8N2Y8 1516 aa30.48■■■□□ 2.47
GABRD-219ENST00000640981 FHAD1B1AJZ9 1412 aa30.47■■■□□ 2.47
GABRD-219ENST00000640981 ADAMTS12P58397 1594 aa30.45■■■□□ 2.46
GABRD-219ENST00000640981 GRIN2AQ12879 1464 aa30.36■■■□□ 2.45
GABRD-219ENST00000640981 CARMIL1Q5VZK9 1371 aa30.34■■■□□ 2.45
GABRD-219ENST00000640981 CUL7Q14999 1698 aa30.32■■■□□ 2.44
GABRD-219ENST00000640981 FAM9AQ8IZU1 332 aaPredicted RBP30.29■■■□□ 2.44
GABRD-219ENST00000640981 CSRNP3Q8WYN3 585 aa30.22■■■□□ 2.43
GABRD-219ENST00000640981 CEP170Q5SW79 1584 aa30.2■■■□□ 2.42
GABRD-219ENST00000640981 NUP160Q12769 1436 aa30.19■■■□□ 2.42
GABRD-219ENST00000640981 CLASP1Q7Z460 1538 aa30.18■■■□□ 2.42
GABRD-219ENST00000640981 EEA1Q15075 1411 aa30.17■■■□□ 2.42
GABRD-219ENST00000640981 RAPGEF2Q9Y4G8 1499 aa30.15■■■□□ 2.42
GABRD-219ENST00000640981 PRXQ9BXM0 1461 aa30.06■■■□□ 2.4
GABRD-219ENST00000640981 ARHGEF11O15085 1522 aa30.04■■■□□ 2.4
GABRD-219ENST00000640981 RIMBP3CA6NJZ7 1639 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms